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8653: Update cwl-runner to match changes in sdk/arvados-cwl-runner
[arvados.git] / crunch_scripts /
2016-05-18 Peter Amstutz8653: Update cwl-runner to match changes in sdk/arvados... tree | commitdiff
2016-05-18 Peter Amstutz8653: cwl-runner crunch script rewrites keep file paths... tree | commitdiff
2016-04-26 Peter AmstutzMerge branch '8931-event-thread-catch-exceptions' close... tree | commitdiff
2016-04-12 radhikaMerge branch 'master' into 8724-keep-block-check-script tree | commitdiff
2016-04-12 Peter AmstutzAdd args.ignore_docker_for_reuse=False to cwl-runner... tree | commitdiff
2016-04-01 Peter AmstutzMerge branch 'master' into 8857-cwl-job-reuse tree | commitdiff
2016-03-31 Peter AmstutzMerge branch '8840-lock-job-record' closes #8840 tree | commitdiff
2016-03-31 Peter AmstutzMerge branch '8654-arv-jobs-cwl-runner' closes #8654 tree | commitdiff
2016-03-31 Peter AmstutzMerge branch 'master' into 8654-arv-jobs-cwl-runner tree | commitdiff
2016-03-30 Peter Amstutz8654: Add comments tree | commitdiff
2016-03-30 radhikaMerge branch 'master' into 8703-job-components tree | commitdiff
2016-03-30 Peter Amstutzcrunchrunner crunch script selects between $JOB_PARAMET... tree | commitdiff
2016-03-29 Peter AmstutzMerge branch '8815-crunchrunner-everywhere' closes... tree | commitdiff
2016-03-29 Peter AmstutzMerge branch '8815-crunchrunner-everywhere' into 8654... tree | commitdiff
2016-03-29 Peter Amstutz8815: Now expect /usr/local/bin/crunchrunner. Bind... tree | commitdiff
2016-03-29 Peter Amstutz8815: Crunch-job bind mounts crunchrunner binary and... tree | commitdiff
2016-03-28 Peter Amstutz8654: Bump cwltool version dependency and print cwl... tree | commitdiff
2016-03-28 Peter AmstutzMerge branch 'master' into 8654-arv-jobs-cwl-runner tree | commitdiff
2016-03-25 Peter Amstutz8654: Passes 100% CWL conformance tests using running... tree | commitdiff
2016-03-23 Peter Amstutz8654: Add value for quiet to args. tree | commitdiff
2016-03-23 Peter AmstutzMerge branch '8766-cwl-collection-project' into 8654... tree | commitdiff
2016-03-22 Peter AmstutzMerge branch 'master' into 8654-arv-jobs-cwl-runner tree | commitdiff
2016-03-21 Peter Amstutz8654: Job has uuid and state fields tree | commitdiff
2016-03-21 Peter Amstutz8654: Add args.debug = True to get backtraces on errors tree | commitdiff
2016-03-21 Peter Amstutz8654: Set args.submit = False tree | commitdiff
2016-03-21 Peter Amstutz8654: Add runner job to pipeline instance. tree | commitdiff
2016-03-21 Peter Amstutz8654: Update cwl:tool entry tree | commitdiff
2016-03-21 Peter Amstutz8654: Fix keeppath and add ensure_unique_name to upload. tree | commitdiff
2016-03-21 Peter Amstutz8654: Scanning for and uploading dependencies for submi... tree | commitdiff
2016-03-21 Peter AmstutzMerge branch 'master' into 8654-arv-jobs-cwl-runner tree | commitdiff
2016-03-16 Peter AmstutzMerge branch 'master' into 6518-crunch2-dispatch-slurm tree | commitdiff
2016-03-11 Peter Amstutz8654: Collect output files into output collection,... tree | commitdiff
2016-03-11 Peter AmstutzMerge branch '8673-cwl-runner-project-uuid' into 8654... tree | commitdiff
2016-03-11 Peter Amstutz8654: Passes in local testing. tree | commitdiff
2016-03-11 Tom CleggAdd 'build/' from commit '555b039609a3c8700c27767c255fd... tree | commitdiff
2016-03-10 Peter AmstutzFixes tree | commitdiff
2016-03-10 Peter AmstutzStuff tree | commitdiff
2016-03-09 Peter Amstutz8654: cwl-runner crunch script tree | commitdiff
2016-03-09 Peter Amstutz8654: cwl-runner crunch stub. tree | commitdiff
2016-03-09 radhikacloses #8508 tree | commitdiff
2016-03-03 radhikaMerge branch '8497-datamanager-batchsize-1000' of https... tree | commitdiff
2016-03-03 Peter AmstutzMerge branch '8620-better-README' closes #8620 tree | commitdiff
2016-03-03 Peter AmstutzMerge branch '8488-cwl-crunchrunner-collection' closes... tree | commitdiff
2016-03-01 Peter AmstutzAdd 'tools/arvbox/' from commit 'd3d368758db1f4a9fa5b89... tree | commitdiff
2016-03-01 Peter AmstutzMerge branch '6605-arv-copy-http' closes #6605 tree | commitdiff
2016-02-29 Tom Clegg8099: 7263: Merge branch 'hgi/7263-even-better-busy... tree | commitdiff
2016-02-19 Peter Amstutz8488: Use crunchrunner binary instead of git repo tree | commitdiff
2016-02-18 Tom CleggMerge branch '8400-additional-gitignore' of https:... tree | commitdiff
2016-02-18 Peter AmstutzMerge branch '8319-bcbio-cwl' closes #8319 tree | commitdiff
2016-02-12 radhikaMerge branch 'master' into 8183-projects-dropdown tree | commitdiff
2016-02-10 radhikaMerge branch 'master' into 8286-fav-projects tree | commitdiff
2016-02-10 radhikaMerge branch 'master' into 8079-api-client-auth-uuid tree | commitdiff
2016-02-10 Tom CleggMerge branch '8284-fix-slurm-queue-timestamp-check... tree | commitdiff
2016-02-09 Nico CesarI "fonud" a typo tree | commitdiff
2016-02-09 Peter AmstutzMerge branch '8404-catch-interrupted-syscall' closes... tree | commitdiff
2016-02-09 Peter Amstutz8404: Adjust try block to just surround os.wait(). tree | commitdiff
2016-02-09 Peter Amstutz8404: catch and continue from interrupted system call... tree | commitdiff
2016-01-05 radhikaMerge branch 'master' into 7607-getting-started-flag tree | commitdiff
2015-12-14 Peter AmstutzMerge branch '6429-crunch2-api' closes #6429 tree | commitdiff
2015-12-11 Peter AmstutzMerge branch 'master' into 7454-azure-custom-data tree | commitdiff
2015-12-03 Tom CleggMerge branch '7751-crunch-fuse-output' closes #7751 tree | commitdiff
2015-12-03 Tom Clegg7751: Add convenience class for staging task output... tree | commitdiff
2015-09-04 Joshua C. RandallMerge pull request #2 from wtsi-hgi/feature/arv-view tree | commitdiff
2015-07-31 Tom CleggMerge branch 'git-commit-debug' of https://github.com... tree | commitdiff
2015-07-31 Tom CleggMerge branch 'crunch-dispatch-docker-bin-env' of https... tree | commitdiff
2015-07-14 Peter AmstutzMerge branch 'master' into github-3408-production-datam... tree | commitdiff
2015-07-14 radhikaMerge branch 'master' into 6219-fuse-performance-testing tree | commitdiff
2015-07-07 ManojMerge branch 'master' into 6465-optimize-workbench... tree | commitdiff
2015-07-02 Nico CesarMerge branch '5989-bug_1' merge with puppet repo "copy... tree | commitdiff
2015-07-02 Peter AmstutzMerge branch '6264-run-command-task-env' refs #6264 tree | commitdiff
2015-07-01 Peter AmstutzMerge branch '6264-run-command-task-env' into 6264... tree | commitdiff
2015-07-01 Peter Amstutz6264: Support setting environment variables. tree | commitdiff
2015-06-26 radhikaMerge branch 'master' into 6234-user-edit-self tree | commitdiff
2015-06-25 Peter AmstutzMerge branch '3198-writable-fuse' closes #3198 tree | commitdiff
2015-06-24 radhikaMerge branch 'master' into 3198-writable-fuse tree | commitdiff
2015-06-10 Peter AmstutzMerge branch 'master' into 3198-writable-fuse tree | commitdiff
2015-05-19 mishazMerge branch 'master' into 3408-production-datamanager tree | commitdiff
2015-05-18 Peter AmstutzMerge branch 'master' into 3198-writable-fuse tree | commitdiff
2015-05-18 Peter Amstutz3198: VWD syncs collection before loading from API... tree | commitdiff
2015-05-12 Radhika ChippadaMerge branch 'master' into 5720-ajax-loading-error tree | commitdiff
2015-05-12 Peter AmstutzMerge branch 'master' into 3198-writable-fuse tree | commitdiff
2015-05-11 Peter AmstutzMerge branch '3198-inode-cache' refs #3198 tree | commitdiff
2015-05-04 Tom CleggMerge branch '5724-blob-signature-ttl' closes #5724 tree | commitdiff
2015-05-04 Radhika ChippadaMerge branch 'master' into 5735-edit-description-box... tree | commitdiff
2015-05-04 Peter AmstutzMerge branch '5787-run-command-checkin' refs #5787 tree | commitdiff
2015-05-04 Peter Amstutz5787: Change caught_error to last_error in vwd.py to... tree | commitdiff
2015-05-04 Peter AmstutzMerge branch '5562-pycurl-upload' closes #5562 tree | commitdiff
2015-05-01 Peter Amstutz5787: Fix syntax error tree | commitdiff
2015-05-01 Peter Amstutz5787: Error writing output will cause task to fail... tree | commitdiff
2015-05-01 Peter Amstutz5787: Write files that are pointed to by symlinks that... tree | commitdiff
2015-05-01 Radhika ChippadaMerge branch 'master' into 4458-breadcrumbs-in-small... tree | commitdiff
2015-05-01 Peter Amstutz5787: Copy to the right destination name, add docstring... tree | commitdiff
2015-05-01 Peter Amstutz5787: run-command uploading uses new collection API... tree | commitdiff
2015-05-01 Radhika ChippadaMerge branch 'master' into 5843-subproject-deletion... tree | commitdiff
2015-04-30 Peter Amstutzrun-command list correct directory to be uploaded when... tree | commitdiff
2015-04-27 Radhika ChippadaMerge branch 'master' into 5780-sharing-popup-message tree | commitdiff
2015-04-23 Tom CleggFix typo. No issue # tree | commitdiff
2015-03-23 Joshua C. RandallMerge pull request #1 from curoverse/master tree | commitdiff
2015-03-04 Tom CleggMerge branch '5043-crunchstat-long-lines' closes #5043 tree | commitdiff
2015-03-03 Radhika ChippadaMerge branch 'master' into 5349-timestamp-error-for... tree | commitdiff
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