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8017: mem-per-cpu
[arvados.git]
/
sdk
/
cwl
/
arvados_cwl
/
2016-05-03
Peter Amstutz
Merge branch '8998-optimize-decode-www-form-component...
tree
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commitdiff
2016-05-02
Tom Clegg
Merge branch '8653-cwl-to-template'
tree
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commitdiff
2016-05-02
Tom Clegg
8653: Add arvados-cwl-runner --create-template flag
tree
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commitdiff
2016-04-12
radhika
Merge branch 'master' into 8724-keep-block-check-script
tree
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commitdiff
2016-04-10
Peter Amstutz
Merge branch '8799-make-drained-nodes-idle' closes...
tree
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commitdiff
2016-04-07
radhika
Merge branch 'master' into 7658-websockets-reconnect...
tree
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commitdiff
2016-04-06
Brett Smith
Merge branch '8879-cwl-runner-job-owner-wip'
tree
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commitdiff
2016-04-06
Brett Smith
8879: cwl-runner --submit respects --project-uuid.
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commitdiff
2016-04-01
Peter Amstutz
Merge branch '8816-compute-node-update-exception' close...
tree
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commitdiff
2016-04-01
Brett Smith
Merge branch '8782-reapchildren-after-signal-wip'
tree
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commitdiff
2016-04-01
Peter Amstutz
Merge branch '8857-cwl-job-reuse' closes #8857
tree
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commitdiff
2016-04-01
Peter Amstutz
Merge branch 'master' into 8857-cwl-job-reuse
tree
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commitdiff
2016-03-31
Peter Amstutz
Merge branch '8840-lock-job-record' closes #8840
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commitdiff
2016-03-31
Peter Amstutz
Merge branch '8654-arv-jobs-cwl-runner' closes #8654
tree
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commitdiff
2016-03-31
Peter Amstutz
8654: Fix versionstring(). Improve help text / comment...
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commitdiff
2016-03-31
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
tree
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commitdiff
2016-03-31
Peter Amstutz
8857: Add --ignore-docker-for-reuse option to assist...
tree
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commitdiff
2016-03-30
Peter Amstutz
8654: Add comments
tree
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commitdiff
2016-03-30
Peter Amstutz
8654: Print uuid of uploaded docker image on stderr...
tree
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commitdiff
2016-03-30
radhika
Merge branch 'master' into 8703-job-components
tree
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commitdiff
2016-03-30
Peter Amstutz
8654: Update test_with_arvbox.sh
tree
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commitdiff
2016-03-29
Peter Amstutz
8654: Fix version string produced by arvados-cwl-runner.
tree
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commitdiff
2016-03-29
Peter Amstutz
Merge branch '8815-crunchrunner-everywhere' closes...
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commitdiff
2016-03-29
Peter Amstutz
Merge branch '8815-crunchrunner-everywhere' into 8654...
tree
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commitdiff
2016-03-29
Peter Amstutz
8654: Make --submit --wait the default mode.
tree
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commitdiff
2016-03-29
Peter Amstutz
8815: Rely on system-provided crunchrunner. Also use...
tree
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commitdiff
2016-03-28
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
tree
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commitdiff
2016-03-25
Peter Amstutz
8654: Passes 100% CWL conformance tests using running...
tree
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commitdiff
2016-03-25
Peter Amstutz
8654: --version reports versions for arvados-cwl-runner...
tree
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commitdiff
2016-03-23
Peter Amstutz
Merge branch '8766-cwl-collection-project'
tree
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commitdiff
2016-03-23
Peter Amstutz
Merge branch 'master' into 8766-cwl-collection-project
tree
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commitdiff
2016-03-23
Peter Amstutz
Merge branch '8766-cwl-collection-project' into 8654...
tree
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commitdiff
2016-03-23
Peter Amstutz
8766: Refactor logic to copy output collection and...
tree
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commitdiff
2016-03-22
Peter Amstutz
8766: Port logic from arv-run-pipeline-instance for...
tree
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commitdiff
2016-03-22
Peter Amstutz
8654: Use iterator instead of readlines() when going...
tree
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commitdiff
2016-03-22
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
tree
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commitdiff
2016-03-22
Peter Amstutz
Crunchrunner fix connect os.Stderr to cmd.Stderr &...
tree
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commitdiff
2016-03-22
Peter Amstutz
8654: Remove print statements.
tree
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commitdiff
2016-03-22
Peter Amstutz
8654: Handle error on capturing runner output
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commitdiff
2016-03-22
Peter Amstutz
8654: Support --quiet
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commitdiff
2016-03-22
Peter Amstutz
8654: Support waiting for submitted runner job to complete
tree
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commitdiff
2016-03-22
Peter Amstutz
8654: Upload Docker images
tree
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commitdiff
2016-03-21
Peter Amstutz
8654: Add runner job to pipeline instance.
tree
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commitdiff
2016-03-21
Peter Amstutz
8654: Scanning for and uploading dependencies for submi...
tree
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commitdiff
2016-03-21
Peter Amstutz
Merge branch 'master' into 8654-arv-jobs-cwl-runner
tree
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commitdiff
2016-03-18
Peter Amstutz
Fix log scanning for "crunchrunner: $(task.outdir)...
tree
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commitdiff
2016-03-17
Peter Amstutz
8654: Resource upload WIP
tree
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commitdiff
2016-03-17
Peter Amstutz
Improve exception reporting for arvados-cwl-runner...
tree
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commitdiff
2016-03-16
radhika
Merge branch 'master' into 8554-trash-untrash-unix...
tree
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commitdiff
2016-03-16
Peter Amstutz
Merge branch 'master' into 6518-crunch2-dispatch-slurm
tree
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commitdiff
2016-03-15
Tom Clegg
Merge branch '8491-import-build-tools' refs #8491
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commitdiff
2016-03-14
Peter Amstutz
Merge branch '8673-cwl-runner-project-uuid' closes...
tree
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commitdiff
2016-03-11
Peter Amstutz
8654: Collect output files into output collection,...
tree
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commitdiff
2016-03-11
Peter Amstutz
Merge branch '8673-cwl-runner-project-uuid' into 8654...
tree
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commitdiff
2016-03-11
Peter Amstutz
8654: Passes in local testing.
tree
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commitdiff
2016-03-11
Peter Amstutz
8673: Fix --project-uuid for arv-keepdocker upload.
tree
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commitdiff
2016-03-11
Tom Clegg
8491: Merge branch 'master' into 8491-import-build...
tree
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commitdiff
2016-03-11
Tom Clegg
Add 'build/' from commit '555b039609a3c8700c27767c255fd...
tree
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commitdiff
2016-03-11
Peter Amstutz
8673: Report pipeline instance uuid. Reuse jobs by...
tree
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commitdiff
2016-03-11
radhika
closes #8558
tree
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commitdiff
2016-03-11
radhika
Merge branch 'master' into 8558-cwl-propagate-resource-req
tree
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commitdiff
2016-03-11
Peter Amstutz
8673: Typo fix for --project-uuid. Refactor main loop...
tree
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commitdiff
2016-03-10
radhika
8558: when cores not found in resources, use default.
tree
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commitdiff
2016-03-10
Peter Amstutz
8673: Adding --project-uuid so resources are created...
tree
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commitdiff
2016-03-10
radhika
8558: compacted code
tree
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commitdiff
2016-03-09
Peter Amstutz
8636: Fix ArvPathMapper.reversemap to return a tuple...
tree
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commitdiff
2016-03-09
radhika
8558: update field names and ensure the tests pass
tree
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commitdiff
2016-03-09
radhika
closes #8508
tree
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commitdiff
2016-03-08
Peter Amstutz
8558: Add test case for running ArvadosCommandTool
tree
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commitdiff
2016-03-04
radhika
8558: include min_scratch_mb_per_node in the keys propa...
tree
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commitdiff
2016-03-04
radhika
Merge branch 'master' into 8558-cwl-propagate-resource-req
tree
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commitdiff
2016-03-04
radhika
8558: add min_cores_per_node and min_ram_mb_per_node...
tree
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commitdiff
2016-03-03
radhika
Merge branch '8497-datamanager-batchsize-1000' of https...
tree
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commitdiff
2016-03-03
Peter Amstutz
Merge branch '8620-better-README' closes #8620
tree
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commitdiff
2016-03-03
Peter Amstutz
Merge branch '8488-cwl-crunchrunner-collection' closes...
tree
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commitdiff
2016-03-03
Peter Amstutz
8488: Fix reverse mapping for references to input files...
tree
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commitdiff
2016-03-02
Peter Amstutz
8488: Match line beginnings
tree
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commitdiff
2016-03-02
Peter Amstutz
8488: Set docker_outdir to get correct outdir in comman...
tree
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commitdiff
2016-03-02
Peter Amstutz
8488: Determine actual output dir from reading logs...
tree
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commitdiff
2016-03-01
Peter Amstutz
Merge branch '8015-crunch2-mount' closes #8015
tree
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commitdiff
2016-03-01
Peter Amstutz
Add 'tools/arvbox/' from commit 'd3d368758db1f4a9fa5b89...
tree
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commitdiff
2016-03-01
Peter Amstutz
Merge branch '6605-arv-copy-http' closes #6605
tree
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commitdiff
2016-02-29
Tom Clegg
8099: 7263: Merge branch 'hgi/7263-even-better-busy...
tree
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commitdiff
2016-02-29
Peter Amstutz
8488: Use OrderedJsonModel so that pipeline components...
tree
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commitdiff
2016-02-25
Peter Amstutz
8488: Fix output collection to accomodate reverse mappi...
tree
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commitdiff
2016-02-23
Peter Amstutz
8488: Update default arvados branch to master
tree
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commitdiff
2016-02-23
Peter Amstutz
8488: crunchrunner brings certificates with it to ensur...
tree
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commitdiff
2016-02-23
Peter Amstutz
8488: Set certificate path.
tree
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commitdiff
2016-02-19
Tom Clegg
Merge branch '8484-sanity-check-collection-count' close...
tree
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commitdiff
2016-02-19
Tom Clegg
Merge branch '8485-datamanager-identical-modifiedat...
tree
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commitdiff
2016-02-19
Peter Amstutz
8488: Use crunchrunner binary instead of git repo
tree
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commitdiff
2016-02-19
Peter Amstutz
Merge branch '8015-crunch2-mount' into 6518-crunch2...
tree
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commitdiff
2016-02-18
radhika
Merge branch 'master' into 8441-project-chooser
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commitdiff
2016-02-18
Tom Clegg
Merge branch '8400-additional-gitignore' of https:...
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commitdiff
2016-02-18
Peter Amstutz
Merge branch '8319-bcbio-cwl' closes #8319
tree
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commitdiff
2016-02-17
Peter Amstutz
8319: Add log message about uploading docker image
tree
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commitdiff
2016-01-29
Peter Amstutz
8319: Fixes to run bcbio-nextgen CWL workflow. Now...
tree
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commitdiff
2016-01-28
Peter Amstutz
8319: Fix arv-cwl-runner file references when referenci...
tree
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commitdiff
2015-12-11
Peter Amstutz
Merge branch 'master' into 7454-azure-custom-data
tree
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commitdiff
2015-11-09
radhika
Merge branch 'master' into 7661-fuse-by-pdh
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