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10793: Fix to return tuple for alternate exit points --create/update-workflow and...
[arvados.git]
/
sdk
/
cwl
/
arvados_cwl
/
2017-01-05
Peter Amstutz
10793: Fix to return tuple for alternate exit points...
tree
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commitdiff
2017-01-05
Peter Amstutz
10793: Move output_callback to finally block to ensure...
tree
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commitdiff
2017-01-05
Peter Amstutz
10793: Return output, status tuple from executor.
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commitdiff
2017-01-05
Peter Amstutz
10793: Bump cwltool pin for workflow engine improvement...
tree
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commitdiff
2016-12-31
Ward Vandewege
Merge branch 'master' into 10786-remove-centos6-from...
tree
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commitdiff
2016-12-30
Tom Clegg
Merge branch '10467-client-disconnect' closes #10467
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commitdiff
2016-12-30
Tom Clegg
Merge branch '10538-trash-delete' closes #10538
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commitdiff
2016-12-30
Peter Amstutz
Merge branch '10497-cwl-job-logs' closes #10497
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commitdiff
2016-12-30
Peter Amstutz
Merge branch '10722-cwl-subworkflow' closes #10722
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commitdiff
2016-12-30
Peter Amstutz
10497: Replace \d\d\d\d with \d{4}
tree
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commitdiff
2016-12-28
Peter Amstutz
10722: Issue better error when 'id' is missing.
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Add logname (crunch-run, stdout, stderr) to...
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Filter crunchstat lines to make more space for...
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Increase number of log lines shown by runner...
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commitdiff
2016-12-28
Peter Amstutz
10497: Don't prefix every line of log from job.
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commitdiff
2016-12-28
Peter Amstutz
10497: Add --no-log-timestamps to eliminate redundant...
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Print last 25 lines of log when job fails.
tree
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commitdiff
2016-12-28
Peter Amstutz
Fix crunch script to construct toolpath before it is...
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commitdiff
2016-12-28
Peter Amstutz
Merge branch '10497-cwl-better-errors' refs #10497
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commitdiff
2016-12-28
Peter Amstutz
10497: Pop cwl:tool parameter from job order
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commitdiff
2016-12-28
Peter Amstutz
10497: Use SourceLine in context manager in PathMapper...
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Improve up front feature checking and error...
tree
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commitdiff
2016-12-28
Peter Amstutz
10497: Add source line reporting to errors and fix...
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commitdiff
2016-12-22
Tom Clegg
Merge branch '10585-crunchstat-lost-parent' refs #10585
tree
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commitdiff
2016-12-21
Lucas Di Pentima
10671: Merge branch 'master' into 10671-pipeline-instan...
tree
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commitdiff
2016-12-21
Tom Clegg
10467: Merge branch 'master' into 10467-client-disconnect
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commitdiff
2016-12-19
Peter Amstutz
Fix CWL tests affected by minimum_script_version tweaks...
tree
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commitdiff
2016-12-19
Peter Amstutz
Adjust arvados repo minimum script versions for job...
tree
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commitdiff
2016-12-19
Peter Amstutz
Fix crunch_script.py to pass name arg, refs #10681
tree
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commitdiff
2016-12-15
Lucas Di Pentima
10383: Merge branch 'master' into 10383-arv-put-increme...
tree
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commitdiff
2016-12-15
Tom Clegg
8460: Merge branch 'master' into 8460-websocket-go
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commitdiff
2016-12-14
Peter Amstutz
Merge branch '10576-cwl-keep-fetcher' closes #10576
tree
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commitdiff
2016-12-13
Peter Amstutz
Merge branch 'master' into 10576-cwl-keep-fetcher
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commitdiff
2016-12-13
Peter Amstutz
10576: Add ability to run pipeline templates containing...
tree
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commitdiff
2016-12-13
Peter Amstutz
10576: Add retries to arvcontainer. Add command line...
tree
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commitdiff
2016-12-11
Tom Clegg
8460: Merge branch 'master' into 8460-websocket-go
tree
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commitdiff
2016-12-09
Lucas Di Pentima
10383: Merge branch 'master' into 10383-arv-put-increme...
tree
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commitdiff
2016-12-09
Peter Amstutz
10576: Set name default to name of workflow when runnin...
tree
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commitdiff
2016-12-09
Peter Amstutz
Merge branch 'master' into 10576-cwl-keep-fetcher
tree
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commitdiff
2016-12-09
Peter Amstutz
10576: Bugfix, set self.uuid on ArvadosContainer.
tree
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commitdiff
2016-12-09
Peter Amstutz
10576: Set template_uuid when creating container reques...
tree
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commitdiff
2016-12-09
Peter Amstutz
Merge branch '10674-wb-workflow-defaults' closes #10674
tree
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commitdiff
2016-12-09
Lucas Di Pentima
10585: Merge branch 'master' into 10587-python-cli...
tree
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commitdiff
2016-12-08
Peter Amstutz
Merge branch '10681-cwl-wf-name-flag' closes #10681
tree
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commitdiff
2016-12-08
Tom Clegg
Merge branch '10467-client-disconnect' refs #10467
tree
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commitdiff
2016-12-08
Peter Amstutz
10681: Apply --name flag to creating and updating workf...
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commitdiff
2016-12-07
Peter Amstutz
Merge branch '10681-cwl-name-flag' closes #10681
tree
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commitdiff
2016-12-07
Peter Amstutz
10576: Fix tests for cwl.input.json part of container...
tree
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commitdiff
2016-12-07
Peter Amstutz
10681: Add --name flag to set name on pipeline instance...
tree
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commitdiff
2016-12-07
Peter Amstutz
10576: Fill in cwl.input.json as a "json" mount instead...
tree
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commitdiff
2016-12-07
Peter Amstutz
Merge branch 'master' into 10576-cwl-keep-fetcher
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commitdiff
2016-12-06
radhika
closes #10215
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commitdiff
2016-12-06
radhika
Merge branch 'master' into 10215-arvados-cwl-runner...
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commitdiff
2016-12-06
radhika
Merge branch 'master' into 10604-crunch2-user-guide
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commitdiff
2016-12-06
Peter Amstutz
Merge branch '10658-crunch-run-missing-files' closes...
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commitdiff
2016-12-06
Peter Amstutz
Merge branch '10649-squeue-stderr' closes #10649
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commitdiff
2016-12-05
Peter Amstutz
10576: Running jobs from keep: and arv: prefixes WIP...
tree
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commitdiff
2016-12-05
Tom Clegg
8460: Merge branch 'master' into 8460-websocket-go
tree
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commitdiff
2016-12-05
radhika
10215: if version arg is used, just display version...
tree
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commitdiff
2016-12-05
Peter Amstutz
10576: Add resolver to execute from keep references...
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commitdiff
2016-12-02
Peter Amstutz
10576: Tests & fixes for keep ref url join.
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commitdiff
2016-12-02
Peter Amstutz
10576: Working on fetch & url join for keep references.
tree
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commitdiff
2016-12-02
radhika
Merge branch 'master' into 10293-cr-log-and-output...
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commitdiff
2016-12-02
Peter Amstutz
Merge branch '10655-arvbash' closes #10655
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commitdiff
2016-12-02
Peter Amstutz
Merge branch '10647-dev-jobs-image' closes #10647
tree
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commitdiff
2016-12-02
Peter Amstutz
Fix bug done.done() not returning output value. refs...
tree
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commitdiff
2016-12-01
Lucas Di Pentima
5737: Merge branch 'master' into 5737-ruby231
tree
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commitdiff
2016-12-01
Peter Amstutz
Merge branch '10651-cwl-submit-runner-ram' refs #10651
tree
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commitdiff
2016-12-01
Peter Amstutz
Merge branch 'origin-10293-cwl-cr-output' closes #10293
tree
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commitdiff
2016-12-01
Peter Amstutz
10651: Check --submit-runner-ram has a valid value...
tree
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commitdiff
2016-12-01
Peter Amstutz
10293: Fix error message when wrong --api provided.
tree
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commitdiff
2016-12-01
Peter Amstutz
10651: Add --submit-runner-ram to specify amount of...
tree
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commitdiff
2016-11-30
Peter Amstutz
10293: Avoid noisy and unhelpful error when cwl.output...
tree
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commitdiff
2016-11-30
Peter Amstutz
10293: Improve error messages for --api and unsupported...
tree
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commitdiff
2016-11-30
Peter Amstutz
10293: Don't try to json decode empty output file to...
tree
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commitdiff
2016-11-30
Peter Amstutz
10293: Override workflow runner done() to get container...
tree
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commitdiff
2016-11-30
Peter Amstutz
10293: Bug fixes
tree
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commitdiff
2016-11-30
Tom Clegg
8460: Merge branch 'master' into 8460-websocket-go
tree
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commitdiff
2016-11-29
Lucas Di Pentima
5737: Merge branch 'master' into 5737-ruby231
tree
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commitdiff
2016-11-28
radhika
Merge branch 'master' into 10293-cwl-cr-output
tree
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commitdiff
2016-11-23
Tom Clegg
Merge branch '10484-count-clients' closes #10484
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commitdiff
2016-11-22
radhika
refs #10524
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commitdiff
2016-11-22
radhika
Merge branch 'master' into 10293-cwl-cr-output
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commitdiff
2016-11-22
radhika
10293: done_outputs in a try/except block
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commitdiff
2016-11-22
Peter Amstutz
Merge branch '10583-cwl-salad-ver' refs #10583
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commitdiff
2016-11-22
Peter Amstutz
10583: Bump versions.
tree
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commitdiff
2016-11-22
radhika
10293: invoke output_callback in a try/except block
tree
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commitdiff
2016-11-22
radhika
Merge branch 'master' into 10293-cwl-cr-output
tree
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commitdiff
2016-11-22
radhika
closes #10524
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commitdiff
2016-11-22
Tom Clegg
Merge branch '9897-log-block-prefetch-worker-exceptions...
tree
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commitdiff
2016-11-22
Tom Clegg
Merge branch '10473-keepstore-logrus' closes #10473
tree
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commitdiff
2016-11-22
Lucas Di Pentima
5737: Merge branch 'master' into 5737-ruby231
tree
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commitdiff
2016-11-22
Peter Amstutz
Merge branch '10498-arvdocker-project-uuid' refs #10498
tree
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commitdiff
2016-11-22
Peter Amstutz
10498: Handle project_uuid of None in arv_docker_get_image.
tree
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commitdiff
2016-11-21
Lucas Di Pentima
10383: Merge branch 'master' into 10383-arv-put-increme...
tree
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commitdiff
2016-11-21
Tom Clegg
Merge branch '10499-cwl-crunch2-docs' refs #10499
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commitdiff
2016-11-18
Javier BĂ©rtoli
Merge branch '10556-get_anonymous_user_token.rb-multipl...
tree
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commitdiff
2016-11-17
Tom Clegg
Merge branch '10498-register-with-chosen-api' closes...
tree
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commitdiff
2016-11-17
Tom Clegg
10498: Tweak var names and help messages.
tree
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commitdiff
2016-11-17
radhika
Merge branch 'master' into 10293-cwl-cr-output
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commitdiff
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