Fix sdk/cwl tests after commit 9df4d7da24ef8be639af1ab806cf833ee544fb45
[arvados.git] / sdk / cwl /
2016-03-23 Ward VandewegeFix sdk/cwl tests after commit 9df4d7da24ef8be639af1ab8...
2016-03-22 Peter AmstutzCrunchrunner fix connect os.Stderr to cmd.Stderr &...
2016-03-18 Peter AmstutzFix log scanning for "crunchrunner: $(task.outdir)...
2016-03-17 Peter AmstutzImprove exception reporting for arvados-cwl-runner...
2016-03-16 radhikaMerge branch 'master' into 8554-trash-untrash-unix...
2016-03-16 Peter AmstutzMerge branch 'master' into 6518-crunch2-dispatch-slurm
2016-03-15 Tom CleggMerge branch '8491-import-build-tools' refs #8491
2016-03-14 Peter AmstutzReally fix cwl-runner tests this time. refs #8673
2016-03-14 Peter AmstutzFix cwl-runner tests. refs #8673
2016-03-14 Peter AmstutzMerge branch '8673-cwl-runner-project-uuid' closes...
2016-03-11 Peter Amstutz8673: Fix --project-uuid for arv-keepdocker upload.
2016-03-11 Tom Clegg8491: Merge branch 'master' into 8491-import-build...
2016-03-11 Tom CleggAdd 'build/' from commit '555b039609a3c8700c27767c255fd...
2016-03-11 Peter Amstutz8673: Report pipeline instance uuid. Reuse jobs by...
2016-03-11 radhikacloses #8558
2016-03-11 radhikaMerge branch 'master' into 8558-cwl-propagate-resource-req
2016-03-11 Peter Amstutz8673: Typo fix for --project-uuid. Refactor main loop...
2016-03-10 radhika8558: when cores not found in resources, use default.
2016-03-10 Peter Amstutz8673: Adding --project-uuid so resources are created...
2016-03-10 radhika8558: compacted code
2016-03-09 Peter Amstutz8636: Fix ArvPathMapper.reversemap to return a tuple...
2016-03-09 radhika8558: update field names and ensure the tests pass
2016-03-09 radhikacloses #8508
2016-03-08 Peter Amstutz8558: Add test case for running ArvadosCommandTool
2016-03-04 radhika8558: include min_scratch_mb_per_node in the keys propa...
2016-03-04 radhikaMerge branch 'master' into 8558-cwl-propagate-resource-req
2016-03-04 Peter AmstutzCWL test select config, refs #8558
2016-03-04 Peter AmstutzBugfix for CWL conformance test script, refs #8558
2016-03-04 Peter AmstutzSelf test script for running CWL conformance tests...
2016-03-04 radhika8558: add min_cores_per_node and min_ram_mb_per_node...
2016-03-03 radhikaMerge branch '8497-datamanager-batchsize-1000' of https...
2016-03-03 Peter AmstutzMerge branch '8620-better-README' closes #8620
2016-03-03 Peter AmstutzMerge branch '8488-cwl-crunchrunner-collection' closes...
2016-03-03 Peter Amstutz8488: Fix reverse mapping for references to input files...
2016-03-02 Peter Amstutz8488: Match line beginnings
2016-03-02 Peter Amstutz8488: Set docker_outdir to get correct outdir in comman...
2016-03-02 Peter Amstutz8488: Determine actual output dir from reading logs...
2016-03-01 Peter AmstutzMerge branch '8015-crunch2-mount' closes #8015
2016-03-01 Peter AmstutzAdd 'tools/arvbox/' from commit 'd3d368758db1f4a9fa5b89...
2016-03-01 Peter AmstutzMerge branch '6605-arv-copy-http' closes #6605
2016-02-29 Tom Clegg8099: 7263: Merge branch 'hgi/7263-even-better-busy...
2016-02-29 Peter Amstutz8488: Use OrderedJsonModel so that pipeline components...
2016-02-26 Peter Amstutz8488: Update cwltool pin
2016-02-25 Peter Amstutz8488: Fix output collection to accomodate reverse mappi...
2016-02-23 Peter Amstutz8488: Update default arvados branch to master
2016-02-23 Peter Amstutz8488: crunchrunner brings certificates with it to ensur...
2016-02-23 Peter Amstutz8488: Set certificate path.
2016-02-19 Tom CleggMerge branch '8484-sanity-check-collection-count' close...
2016-02-19 Tom CleggMerge branch '8485-datamanager-identical-modifiedat...
2016-02-19 Peter Amstutz8488: Use crunchrunner binary instead of git repo
2016-02-19 Peter AmstutzMerge branch '8015-crunch2-mount' into 6518-crunch2...
2016-02-18 radhikaMerge branch 'master' into 8441-project-chooser
2016-02-18 Tom CleggMerge branch '8400-additional-gitignore' of https:...
2016-02-18 Peter AmstutzMerge branch '8319-bcbio-cwl' closes #8319
2016-02-17 Peter Amstutz8319: Add log message about uploading docker image
2016-01-29 Peter Amstutz8319: Fixes to run bcbio-nextgen CWL workflow. Now...
2016-01-28 Peter Amstutz8319: Fix arv-cwl-runner file references when referenci...
2015-12-11 Peter AmstutzMerge branch 'master' into 7454-azure-custom-data
2015-11-09 radhikaMerge branch 'master' into 7661-fuse-by-pdh
2015-11-04 Tom CleggMerge branch '7444-dockercleaner-containers' closes...
2015-11-04 Tom CleggMerge branch '5824-keep-web' into 5824-keep-web-workbench
2015-11-04 Tom Clegg5824: Merge branch 'master' into 5824-keep-web
2015-11-03 radhikaMerge branch 'master' into 7534-superuser-token
2015-11-02 Peter AmstutzMerge branch '7593-cwl-crunchrunner' closes #7593
2015-11-02 Peter Amstutz7593: Add version hint to arvados-python-client. Add...
2015-10-29 Peter Amstutz7593: Add arvados-cwl-runner to disambiguate if there...
2015-10-28 Peter Amstutz7593: Make peter/crunchrunner the default repository...
2015-10-28 Peter Amstutz7593: Generate files replaces $(task.keep)/ with keep...
2015-10-27 Peter Amstutz7593: Fixup to use keep: URI scheme globbing for outputs.
2015-10-27 Peter Amstutz7593: References to files in keep must have keep: URI...
2015-10-26 Peter Amstutz7593: Don't upload the same files more than once. ...
2015-10-26 Brett SmithMerge branch 'pr/25'
2015-10-26 Peter Amstutz7582: Passes draft-2 conformance tests.
2015-10-23 Peter Amstutz7582: Fixup to work with latest cwltool. Runs jobs...
2015-10-20 Brett SmithMerge branch 'pr/28'
2015-10-15 Tom CleggMerge branch 'master' into wtsi-hgi-feature/arv-view
2015-10-09 radhikaMerge branch '7167-keep-rsync-test-setup' into 7167...
2015-10-09 radhikaMerge branch 'master' into 7167-keep-rsync-test-setup
2015-10-09 Peter AmstutzMerge branch 'master' into 7491-go-keepclient-retry
2015-10-09 Tom CleggMerge branch '7491-keepclient-bugs' refs #7491
2015-10-09 Tom CleggMerge branch '7167-blob-sign-sdk' refs #7167
2015-10-09 Brett SmithVersion the CWL runner's dependency on cwltool.
2015-09-04 Joshua C. RandallMerge pull request #2 from wtsi-hgi/feature/arv-view
2015-08-03 Brett SmithMerge branch '6221-write-trash-list'
2015-07-31 Tom CleggMerge branch 'git-commit-debug' of https://github.com...
2015-07-31 Tom CleggMerge branch 'crunch-dispatch-docker-bin-env' of https...
2015-07-24 Peter AmstutzMerge branch '6705-fix-websockets-replay' closes #6705
2015-07-22 Brett SmithAdd standard Python .gitignore for CWL SDK.
2015-07-22 Peter AmstutzMerge branch '6264-cwl-runner' closes #6264
2015-07-21 Peter Amstutz6264: Typo fix.
2015-07-21 Peter Amstutz6264: Code cleanup: rename "i" in _match() to "filename...
2015-07-21 Peter Amstutz6264: Use mutually exclusive group for enable/disable...
2015-07-07 Peter Amstutz6264: Fix bin/cwl-runner to import correct module.
2015-07-06 Peter Amstutz6264: Move cwlrunner into its own module.