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9766: Fix make_workflow to not modify input object. upload_dependencies
[arvados.git] / sdk / cwl / setup.py
2016-08-29 Peter Amstutz9766: Full workflow: create workflow using command... blob | commitdiff | raw
2016-08-29 Peter Amstutz9766: Supports packing workflow, setting defaults,... blob | commitdiff | raw | diff to current
2016-08-25 Tom CleggMerge branch '9705-crunch2-install-guide-wip' blob | commitdiff | raw | diff to current
2016-08-19 Tom CleggMerge branch '9684-workflows' blob | commitdiff | raw | diff to current
2016-08-18 Lucas Di PentimaMerge branch 'master' into 9333-api-server-invalid-sql blob | commitdiff | raw | diff to current
2016-08-18 radhikacloses #9684 blob | commitdiff | raw | diff to current
2016-08-17 Lucas Di PentimaMerge branch '9333-api-server-invalid-sql' blob | commitdiff | raw | diff to current
2016-08-15 radhikacloses #9709 blob | commitdiff | raw | diff to current
2016-08-11 Peter AmstutzMerge branch '9751-cwl-keep-dir' closes #9751 blob | commitdiff | raw | diff to current
2016-08-11 Peter Amstutz9751: Bump cwltool dependency. blob | commitdiff | raw | diff to current
2016-08-11 Peter Amstutz9751: Fix unit tests. Rename dir6.cwl to keep-dir... blob | commitdiff | raw | diff to current
2016-08-11 Peter Amstutz9751: Override realpath in CollectionFsAccess blob | commitdiff | raw | diff to current
2016-08-11 Peter Amstutz9751: Provide make_fs_access=CollectionFsAccess and... blob | commitdiff | raw | diff to current
2016-07-27 radhikaMerge branch 'master' into 8568-docker-version-support blob | commitdiff | raw | diff to current
2016-07-27 radhikacloses #9552 blob | commitdiff | raw | diff to current
2016-07-27 radhikaMerge branch 'master' into 9552-compute-checksum-flag blob | commitdiff | raw | diff to current
2016-07-26 Brett Smith9659: Bump CWL SDK's versioned dependency on PySDK. blob | commitdiff | raw | diff to current
2016-07-26 radhika9552: update cwltool version, which offer compute_check... blob | commitdiff | raw | diff to current
2016-07-18 Lucas Di PentimaMerge branch '9438-http-default-timeout' blob | commitdiff | raw | diff to current
2016-07-15 Peter AmstutzMerge branch 'master' into 9369-arv-cwl-docs blob | commitdiff | raw | diff to current
2016-07-15 Peter AmstutzMerge branch '9570-cwl-runner-fixes' closes #9570 ... blob | commitdiff | raw | diff to current
2016-07-15 Peter Amstutz9570: Bump cwltool dependency blob | commitdiff | raw | diff to current
2016-07-13 Nico CesarMerge branch '9459-test_with_arvbox_tweaks' blob | commitdiff | raw | diff to current
2016-07-13 Peter AmstutzMerge branch '9486-retry-instance-limit-exceeded' close... blob | commitdiff | raw | diff to current
2016-07-13 Peter AmstutzMerge branch '9570-cwl-v1.0' closes #9570 blob | commitdiff | raw | diff to current
2016-07-13 Peter Amstutz9570: Update version pin and add reminder to setup... blob | commitdiff | raw | diff to current
2016-07-12 Peter Amstutz9570: Support Directory and file literal features.... blob | commitdiff | raw | diff to current
2016-07-11 Peter Amstutz9570: CWL v1.0 support wip blob | commitdiff | raw | diff to current
2016-07-07 Tom Clegg9567: Avoid ruamel.yaml >0.11.11. refs #9567 blob | commitdiff | raw | diff to current
2016-07-07 Tom CleggRevert "Bump cwltool dependency. Previously pinned... blob | commitdiff | raw | diff to current
2016-07-07 Tom CleggBump cwltool dependency. Previously pinned version... blob | commitdiff | raw | diff to current
2016-06-30 Peter AmstutzUpdate arvados-cwl-runner cwltool pin to get ruamel... blob | commitdiff | raw | diff to current
2016-06-29 Peter AmstutzMerge branch '9511-cwl-type-checking' closes #9511 blob | commitdiff | raw | diff to current
2016-06-29 Peter Amstutz9511: Bump cwltool dependency to get bugfix (81ff56f239... blob | commitdiff | raw | diff to current
2016-06-27 Lucas Di PentimaMerge branch '9446-refactor-keep-parallel-write-strategy' blob | commitdiff | raw | diff to current
2016-06-22 Peter AmstutzMerge branch 'origin-8442-cwl-crunch2' closes #8442 blob | commitdiff | raw | diff to current
2016-06-22 Peter AmstutzMerge branch 'master' into origin-8442-cwl-crunch2 blob | commitdiff | raw | diff to current
2016-06-15 Peter Amstutz8442: raise UnsupportedRequirement for unsupported... blob | commitdiff | raw | diff to current
2016-06-08 radhikaMerge branch 'master' into wtsi-hgi-8087-arv-cli-reques... blob | commitdiff | raw | diff to current
2016-06-08 radhikaMerge branch '8087-arv-cli-request-body-from-file'... blob | commitdiff | raw | diff to current
2016-06-06 Peter AmstutzMerge branch 'master' into 9187-crunchv2-dispatching blob | commitdiff | raw | diff to current
2016-05-31 radhikaMerge branch 'master' into 8876-work-unit blob | commitdiff | raw | diff to current
2016-05-31 Brett Smith9316: Include documentation in CWL SDK. blob | commitdiff | raw | diff to current
2016-05-20 Tom CleggMerge branch 'wtsi-hgi-9231-rename-redunancy-to-replica... blob | commitdiff | raw | diff to current
2016-05-19 Peter AmstutzMerge branch '8653-cwl-runner-handle-files' closes... blob | commitdiff | raw | diff to current
2016-05-19 Peter Amstutz8653: Fix tests. blob | commitdiff | raw | diff to current
2016-05-18 Peter Amstutz8653: cwl-runner crunch script rewrites keep file paths... blob | commitdiff | raw | diff to current
2016-05-03 Peter AmstutzMerge branch '8998-optimize-decode-www-form-component... blob | commitdiff | raw | diff to current
2016-05-02 Tom CleggMerge branch '8653-cwl-to-template' blob | commitdiff | raw | diff to current
2016-05-02 Tom Clegg8653: Add arvados-cwl-runner --create-template flag blob | commitdiff | raw | diff to current
2016-04-26 Peter AmstutzMerge branch '8931-event-thread-catch-exceptions' close... blob | commitdiff | raw | diff to current
2016-04-21 radhikacloses #8936 blob | commitdiff | raw | diff to current
2016-04-21 Peter AmstutzPin bump cwltool dependency and pin version so it doesn... blob | commitdiff | raw | diff to current
2016-04-01 Peter AmstutzMerge branch 'master' into 8857-cwl-job-reuse blob | commitdiff | raw | diff to current
2016-03-31 Peter AmstutzMerge branch '8840-lock-job-record' closes #8840 blob | commitdiff | raw | diff to current
2016-03-31 Peter AmstutzMerge branch '8654-arv-jobs-cwl-runner' closes #8654 blob | commitdiff | raw | diff to current
2016-03-31 Peter AmstutzMerge branch 'master' into 8654-arv-jobs-cwl-runner blob | commitdiff | raw | diff to current
2016-03-29 Peter AmstutzMerge branch '8815-crunchrunner-everywhere' into 8654... blob | commitdiff | raw | diff to current
2016-03-28 Peter Amstutz8654: Bump cwltool version dependency and print cwl... blob | commitdiff | raw | diff to current
2016-03-28 Peter AmstutzMerge branch 'master' into 8654-arv-jobs-cwl-runner blob | commitdiff | raw | diff to current
2016-03-23 Peter AmstutzMerge branch '8766-cwl-collection-project' into 8654... blob | commitdiff | raw | diff to current
2016-03-22 Peter Amstutz8654: Bump cwltool version blob | commitdiff | raw | diff to current
2016-03-22 Peter AmstutzMerge branch 'master' into 8654-arv-jobs-cwl-runner blob | commitdiff | raw | diff to current
2016-03-22 Peter Amstutz8654: Bump arvados-cwl-runner version dependency on... blob | commitdiff | raw | diff to current
2016-03-21 Peter Amstutz8654: Bump arvados-cwl-runner version dependency on... blob | commitdiff | raw | diff to current
2016-03-21 Peter AmstutzMerge branch 'master' into 8654-arv-jobs-cwl-runner blob | commitdiff | raw | diff to current
2016-03-17 radhikaMerge branch '8087-arv-cli-request-body-from-file'... blob | commitdiff | raw | diff to current
2016-03-16 radhikaMerge branch 'master' into 8554-trash-untrash-unix... blob | commitdiff | raw | diff to current
2016-03-16 Peter AmstutzMerge branch 'master' into 6518-crunch2-dispatch-slurm blob | commitdiff | raw | diff to current
2016-03-15 Tom CleggMerge branch '8491-import-build-tools' refs #8491 blob | commitdiff | raw | diff to current
2016-03-14 Peter AmstutzMerge branch '8673-cwl-runner-project-uuid' closes... blob | commitdiff | raw | diff to current
2016-03-11 Peter AmstutzMerge branch '8673-cwl-runner-project-uuid' into 8654... blob | commitdiff | raw | diff to current
2016-03-11 Tom Clegg8491: Merge branch 'master' into 8491-import-build... blob | commitdiff | raw | diff to current
2016-03-11 Tom CleggAdd 'build/' from commit '555b039609a3c8700c27767c255fd... blob | commitdiff | raw | diff to current
2016-03-11 Peter Amstutz8673: Report pipeline instance uuid. Reuse jobs by... blob | commitdiff | raw | diff to current
2016-03-11 radhikacloses #8558 blob | commitdiff | raw | diff to current
2016-03-11 radhikaMerge branch 'master' into 8558-cwl-propagate-resource-req blob | commitdiff | raw | diff to current
2016-03-09 Peter Amstutz8636: Fix ArvPathMapper.reversemap to return a tuple... blob | commitdiff | raw | diff to current
2016-03-09 radhikacloses #8508 blob | commitdiff | raw | diff to current
2016-03-08 Peter Amstutz8558: Add test case for running ArvadosCommandTool blob | commitdiff | raw | diff to current
2016-03-03 radhikaMerge branch '8497-datamanager-batchsize-1000' of https... blob | commitdiff | raw | diff to current
2016-03-03 Peter AmstutzMerge branch '8620-better-README' closes #8620 blob | commitdiff | raw | diff to current
2016-03-03 Peter AmstutzMerge branch '8488-cwl-crunchrunner-collection' closes... blob | commitdiff | raw | diff to current
2016-03-02 Peter Amstutz8488: Set docker_outdir to get correct outdir in comman... blob | commitdiff | raw | diff to current
2016-03-02 Peter Amstutz8488: Determine actual output dir from reading logs... blob | commitdiff | raw | diff to current
2016-03-01 Peter AmstutzMerge branch '8015-crunch2-mount' closes #8015 blob | commitdiff | raw | diff to current
2016-03-01 Peter AmstutzAdd 'tools/arvbox/' from commit 'd3d368758db1f4a9fa5b89... blob | commitdiff | raw | diff to current
2016-03-01 Peter AmstutzMerge branch '6605-arv-copy-http' closes #6605 blob | commitdiff | raw | diff to current
2016-02-29 Tom Clegg8099: 7263: Merge branch 'hgi/7263-even-better-busy... blob | commitdiff | raw | diff to current
2016-02-26 Peter Amstutz8488: Update cwltool pin blob | commitdiff | raw | diff to current
2016-02-25 Peter Amstutz8488: Fix output collection to accomodate reverse mappi... blob | commitdiff | raw | diff to current
2016-02-19 Tom CleggMerge branch '8484-sanity-check-collection-count' close... blob | commitdiff | raw | diff to current
2016-02-19 Tom CleggMerge branch '8485-datamanager-identical-modifiedat... blob | commitdiff | raw | diff to current
2016-02-19 Peter AmstutzMerge branch '8015-crunch2-mount' into 6518-crunch2... blob | commitdiff | raw | diff to current
2016-02-18 radhikaMerge branch 'master' into 8441-project-chooser blob | commitdiff | raw | diff to current
2016-02-18 Tom CleggMerge branch '8400-additional-gitignore' of https:... blob | commitdiff | raw | diff to current
2016-02-18 Peter AmstutzMerge branch '8319-bcbio-cwl' closes #8319 blob | commitdiff | raw | diff to current
2016-01-29 Peter Amstutz8319: Fixes to run bcbio-nextgen CWL workflow. Now... blob | commitdiff | raw | diff to current
2015-12-11 Peter AmstutzMerge branch 'master' into 7454-azure-custom-data blob | commitdiff | raw | diff to current
2015-11-09 radhikaMerge branch 'master' into 7661-fuse-by-pdh blob | commitdiff | raw | diff to current
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