inside Docker container with proper
build environment.
-run-build-packages-sso.sh Build single-sign-on server packages.
-
run-build-packages-python-and-ruby.sh Build Python and Ruby packages suitable
for upload to PyPi and Rubygems.
run-library.sh A library of functions shared by the
various scripts in this
- directory.
\ No newline at end of file
+ directory.
WORKSPACE=path Path to the Arvados source tree to build packages from
CWLTOOL=path (optional) Path to cwltool git repository.
SALAD=path (optional) Path to schema_salad git repository.
-PYCMD=pythonexec (optional) Specify the python executable to use in the docker image. Defaults to "python3".
+PYCMD=pythonexec (optional) Specify the python3 executable to use in the docker image. Defaults to "python3".
EOF
pipcmd=pip3
fi
-(cd sdk/python && python setup.py sdist)
+(cd sdk/python && python3 setup.py sdist)
sdk=$(cd sdk/python/dist && ls -t arvados-python-client-*.tar.gz | head -n1)
-(cd sdk/cwl && python setup.py sdist)
+(cd sdk/cwl && python3 setup.py sdist)
runner=$(cd sdk/cwl/dist && ls -t arvados-cwl-runner-*.tar.gz | head -n1)
rm -rf sdk/cwl/salad_dist
mkdir -p sdk/cwl/salad_dist
if [[ -n "$SALAD" ]] ; then
- (cd "$SALAD" && python setup.py sdist)
+ (cd "$SALAD" && python3 setup.py sdist)
salad=$(cd "$SALAD/dist" && ls -t schema-salad-*.tar.gz | head -n1)
cp "$SALAD/dist/$salad" $WORKSPACE/sdk/cwl/salad_dist
fi
rm -rf sdk/cwl/cwltool_dist
mkdir -p sdk/cwl/cwltool_dist
if [[ -n "$CWLTOOL" ]] ; then
- (cd "$CWLTOOL" && python setup.py sdist)
+ (cd "$CWLTOOL" && python3 setup.py sdist)
cwltool=$(cd "$CWLTOOL/dist" && ls -t cwltool-*.tar.gz | head -n1)
cp "$CWLTOOL/dist/$cwltool" $WORKSPACE/sdk/cwl/cwltool_dist
fi
#
# SPDX-License-Identifier: AGPL-3.0
-all: centos7/generated debian9/generated debian10/generated ubuntu1604/generated ubuntu1804/generated
+all: centos7/generated debian10/generated ubuntu1604/generated ubuntu1804/generated
centos7/generated: common-generated-all
test -d centos7/generated || mkdir centos7/generated
cp -f -rlt centos7/generated common-generated/*
-debian9/generated: common-generated-all
- test -d debian9/generated || mkdir debian9/generated
- cp -f -rlt debian9/generated common-generated/*
-
debian10/generated: common-generated-all
test -d debian10/generated || mkdir debian10/generated
cp -f -rlt debian10/generated common-generated/*
-
ubuntu1604/generated: common-generated-all
test -d ubuntu1604/generated || mkdir ubuntu1604/generated
cp -f -rlt ubuntu1604/generated common-generated/*
# Need to "touch" RPM database to workaround bug in interaction between
# overlayfs and yum (https://bugzilla.redhat.com/show_bug.cgi?id=1213602)
-RUN touch /var/lib/rpm/* && yum -q -y install rh-python36
-RUN scl enable rh-python36 "easy_install-3.6 pip"
+RUN touch /var/lib/rpm/* && yum -q -y install python3 python3-pip python3-devel
-# Add epel, we need it for the python-pam dependency
-#RUN wget http://dl.fedoraproject.org/pub/epel/epel-release-latest-7.noarch.rpm
-#RUN rpm -ivh epel-release-latest-7.noarch.rpm
+# Install virtualenv
+RUN /usr/bin/pip3 install 'virtualenv<20'
RUN git clone --depth 1 git://git.arvados.org/arvados.git /tmp/arvados && cd /tmp/arvados/services/api && /usr/local/rvm/bin/rvm-exec default bundle && cd /tmp/arvados/apps/workbench && /usr/local/rvm/bin/rvm-exec default bundle
# The version of setuptools that comes with CentOS is way too old
-RUN scl enable rh-python36 "easy_install-3.6 pip install 'setuptools<45'"
+RUN pip3 install 'setuptools<45'
ENV WORKSPACE /arvados
-CMD ["scl", "enable", "rh-python36", "/usr/local/rvm/bin/rvm-exec default bash /jenkins/run-build-packages.sh --target centos7"]
+CMD ["/usr/local/rvm/bin/rvm-exec", "default", "bash", "/jenkins/run-build-packages.sh", "--target", "centos7"]
+++ /dev/null
-# Copyright (C) The Arvados Authors. All rights reserved.
-#
-# SPDX-License-Identifier: AGPL-3.0
-
-## dont use debian:9 here since the word 'stretch' is used for rvm precompiled binaries
-FROM debian:stretch
-MAINTAINER Arvados Package Maintainers <packaging@arvados.org>
-
-ENV DEBIAN_FRONTEND noninteractive
-
-# Install dependencies.
-RUN /usr/bin/apt-get update && /usr/bin/apt-get install -q -y python3 python3-setuptools python3-pip libcurl4-gnutls-dev curl git procps libattr1-dev libfuse-dev libgnutls28-dev libpq-dev unzip python3-venv python3-dev libpam-dev
-
-# Install virtualenv
-RUN /usr/bin/pip3 install 'virtualenv<20'
-
-# Install RVM
-ADD generated/mpapis.asc /tmp/
-ADD generated/pkuczynski.asc /tmp/
-RUN gpg --import --no-tty /tmp/mpapis.asc && \
- gpg --import --no-tty /tmp/pkuczynski.asc && \
- curl -L https://get.rvm.io | bash -s stable && \
- /usr/local/rvm/bin/rvm install 2.5 && \
- /usr/local/rvm/bin/rvm alias create default ruby-2.5 && \
- /usr/local/rvm/bin/rvm-exec default gem install bundler --version 2.0.2 && \
- /usr/local/rvm/bin/rvm-exec default gem install fpm --version 1.10.2
-
-# Install golang binary
-ADD generated/go1.13.4.linux-amd64.tar.gz /usr/local/
-RUN ln -s /usr/local/go/bin/go /usr/local/bin/
-
-# Install nodejs and npm
-ADD generated/node-v6.11.2-linux-x64.tar.xz /usr/local/
-RUN ln -s /usr/local/node-v6.11.2-linux-x64/bin/* /usr/local/bin/
-
-RUN git clone --depth 1 git://git.arvados.org/arvados.git /tmp/arvados && cd /tmp/arvados/services/api && /usr/local/rvm/bin/rvm-exec default bundle && cd /tmp/arvados/apps/workbench && /usr/local/rvm/bin/rvm-exec default bundle
-
-ENV WORKSPACE /arvados
-CMD ["/usr/local/rvm/bin/rvm-exec", "default", "bash", "/jenkins/run-build-packages.sh", "--target", "debian9"]
#
# SPDX-License-Identifier: AGPL-3.0
-all: centos7/generated debian9/generated debian10/generated ubuntu1604/generated ubuntu1804/generated
+all: centos7/generated debian10/generated ubuntu1604/generated ubuntu1804/generated
centos7/generated: common-generated-all
test -d centos7/generated || mkdir centos7/generated
cp -f -rlt centos7/generated common-generated/*
-debian9/generated: common-generated-all
- test -d debian9/generated || mkdir debian9/generated
- cp -f -rlt debian9/generated common-generated/*
-
debian10/generated: common-generated-all
test -d debian10/generated || mkdir debian10/generated
cp -f -rlt debian10/generated common-generated/*
+++ /dev/null
-# Copyright (C) The Arvados Authors. All rights reserved.
-#
-# SPDX-License-Identifier: AGPL-3.0
-
-FROM debian:stretch
-MAINTAINER Arvados Package Maintainers <packaging@arvados.org>
-
-ENV DEBIAN_FRONTEND noninteractive
-
-# Install dependencies
-RUN apt-get update && \
- apt-get -y install --no-install-recommends curl ca-certificates gpg procps
-
-# Install RVM
-ADD generated/mpapis.asc /tmp/
-ADD generated/pkuczynski.asc /tmp/
-RUN gpg --import --no-tty /tmp/mpapis.asc && \
- gpg --import --no-tty /tmp/pkuczynski.asc && \
- curl -L https://get.rvm.io | bash -s stable && \
- /usr/local/rvm/bin/rvm install 2.5 && \
- /usr/local/rvm/bin/rvm alias create default ruby-2.5 && \
- /usr/local/rvm/bin/rvm-exec default gem install bundler --version 2.0.2
-
-# udev daemon can't start in a container, so don't try.
-RUN mkdir -p /etc/udev/disabled
-
-RUN echo "deb file:///arvados/packages/debian9/ /" >>/etc/apt/sources.list
arv-put --version
-/usr/share/python3/dist/rh-python36-python-arvados-python-client/bin/python3 << EOF
+/usr/bin/python3 << EOF
import arvados
print("Successfully imported arvados")
EOF
* After it installs the core configuration files (database.yml, application.yml, and production.rb) to /etc/arvados/server, it calls setup_extra_conffiles. By default this is a noop function (in step2.sh).
* Before it restarts nginx, it calls setup_before_nginx_restart. By default this is a noop function (in step2.sh). API server defines this to set up the internal git repository, if necessary.
-* $RAILSPKG_DATABASE_LOAD_TASK defines the Rake task to load the database. API server uses db:structure:load. SSO server uses db:schema:load. Workbench doesn't set this, which causes the postinst to skip all database work.
-* If $RAILSPKG_SUPPORTS_CONFIG_CHECK != 1, it won't run the config:check rake task. SSO clears this flag (it doesn't have that task code).
+* $RAILSPKG_DATABASE_LOAD_TASK defines the Rake task to load the database. API server uses db:structure:load. Workbench doesn't set this, which causes the postinst to skip all database work.
+* If $RAILSPKG_SUPPORTS_CONFIG_CHECK != 1, it won't run the config:check rake task.
+++ /dev/null
-#!/bin/sh
-# Copyright (C) The Arvados Authors. All rights reserved.
-#
-# SPDX-License-Identifier: AGPL-3.0
-
-# This file declares variables common to all scripts for one Rails package.
-
-PACKAGE_NAME=arvados-sso-server
-INSTALL_PATH=/var/www/arvados-sso
-CONFIG_PATH=/etc/arvados/sso
-DOC_URL="https://doc.arvados.org/v2.0/install/install-sso.html#configure"
-RAILSPKG_DATABASE_LOAD_TASK=db:schema:load
-RAILSPKG_SUPPORTS_CONFIG_CHECK=0
configure_version
fi
-if printf '%s\n' "$CONFIG_PATH" | grep -Fqe "sso"; then
- report_not_ready "$APPLICATION_READY" "$CONFIG_PATH/application.yml"
- report_not_ready "$DATABASE_READY" "$CONFIG_PATH/database.yml"
-else
- report_not_ready "$APPLICATION_READY" "/etc/arvados/config.yml"
-fi
+report_not_ready "$APPLICATION_READY" "/etc/arvados/config.yml"
echo >&2
echo >&2 "$0 options:"
echo >&2 " -t, --tags [csv_tags] comma separated tags"
+ echo >&2 " -i, --images [dev,demo] Choose which images to build (default: dev and demo)"
echo >&2 " -u, --upload Upload the images (docker push)"
echo >&2 " -h, --help Display this help and exit"
echo >&2
}
upload=false
+images=dev,demo
# NOTE: This requires GNU getopt (part of the util-linux package on Debian-based distros).
-TEMP=`getopt -o hut: \
- --long help,upload,tags: \
+TEMP=`getopt -o hut:i: \
+ --long help,upload,tags:,images: \
-n "$0" -- "$@"`
if [ $? != 0 ] ; then echo "Use -h for help"; exit 1 ; fi
upload=true
shift
;;
+ -i | --images)
+ case "$2" in
+ "")
+ echo "ERROR: --images needs a parameter";
+ usage;
+ exit 1
+ ;;
+ *)
+ images=$2;
+ shift 2
+ ;;
+ esac
+ ;;
-t | --tags)
case "$2" in
"")
}
docker_push () {
+ # docker always creates a local 'latest' tag, and we don't want to push that
+ # tag in every case. Remove it.
+ docker rmi $1:latest
if [[ ! -z "$tags" ]]
then
for tag in $( echo $tags|tr "," " " )
# clean up the docker build environment
cd "$WORKSPACE"
-title "Starting arvbox build localdemo"
+if [[ "$images" =~ demo ]]; then
+ title "Starting arvbox build localdemo"
-tools/arvbox/bin/arvbox build localdemo
-ECODE=$?
+ tools/arvbox/bin/arvbox build localdemo
+ ECODE=$?
-if [[ "$ECODE" != "0" ]]; then
- title "!!!!!! docker BUILD FAILED !!!!!!"
- EXITCODE=$(($EXITCODE + $ECODE))
+ if [[ "$ECODE" != "0" ]]; then
+ title "!!!!!! docker BUILD FAILED !!!!!!"
+ EXITCODE=$(($EXITCODE + $ECODE))
+ fi
fi
-title "Starting arvbox build dev"
+if [[ "$images" =~ dev ]]; then
+ title "Starting arvbox build dev"
-tools/arvbox/bin/arvbox build dev
+ tools/arvbox/bin/arvbox build dev
-ECODE=$?
+ ECODE=$?
-if [[ "$ECODE" != "0" ]]; then
- title "!!!!!! docker BUILD FAILED !!!!!!"
- EXITCODE=$(($EXITCODE + $ECODE))
+ if [[ "$ECODE" != "0" ]]; then
+ title "!!!!!! docker BUILD FAILED !!!!!!"
+ EXITCODE=$(($EXITCODE + $ECODE))
+ fi
fi
title "docker build complete (`timer`)"
-title "uploading images"
-
-timer_reset
-
if [[ "$EXITCODE" != "0" ]]; then
title "upload arvados images SKIPPED because build failed"
else
if [[ $upload == true ]]; then
+ title "uploading images"
+ timer_reset
+
## 20150526 nico -- *sometimes* dockerhub needs re-login
## even though credentials are already in .dockercfg
docker login -u arvados
keep-block-check
keep-web
libarvados-perl
- libpam-arvados-go"
- if [[ "$TARGET" =~ "centos" ]]; then
- packages="$packages
- rh-python36-python-cwltest
- rh-python36-python-arvados-fuse
- rh-python36-python-arvados-python-client
- rh-python36-python-arvados-cwl-runner
- rh-python36-python-crunchstat-summary"
- else
- packages="$packages
+ libpam-arvados-go
python3-cwltest
python3-arvados-fuse
python3-arvados-python-client
python3-arvados-cwl-runner
python3-crunchstat-summary"
- fi
fi
FINAL_EXITCODE=0
+++ /dev/null
-#!/bin/bash
-# Copyright (C) The Arvados Authors. All rights reserved.
-#
-# SPDX-License-Identifier: AGPL-3.0
-
-JENKINS_DIR=$(dirname $(readlink -e "$0"))
-. "$JENKINS_DIR/run-library.sh"
-
-read -rd "\000" helpmessage <<EOF
-$(basename $0): Build Arvados SSO server package
-
-Syntax:
- WORKSPACE=/path/to/arvados-sso $(basename $0) [options]
-
-Options:
-
---debug
- Output debug information (default: false)
---target
- Distribution to build packages for (default: debian10)
-
-WORKSPACE=path Path to the Arvados SSO source tree to build packages from
-
-EOF
-
-EXITCODE=0
-DEBUG=${ARVADOS_DEBUG:-0}
-TARGET=debian10
-
-PARSEDOPTS=$(getopt --name "$0" --longoptions \
- help,build-bundle-packages,debug,target: \
- -- "" "$@")
-if [ $? -ne 0 ]; then
- exit 1
-fi
-
-eval set -- "$PARSEDOPTS"
-while [ $# -gt 0 ]; do
- case "$1" in
- --help)
- echo >&2 "$helpmessage"
- echo >&2
- exit 1
- ;;
- --target)
- TARGET="$2"; shift
- ;;
- --debug)
- DEBUG=1
- ;;
- --test-packages)
- test_packages=1
- ;;
- --)
- if [ $# -gt 1 ]; then
- echo >&2 "$0: unrecognized argument '$2'. Try: $0 --help"
- exit 1
- fi
- ;;
- esac
- shift
-done
-
-STDOUT_IF_DEBUG=/dev/null
-STDERR_IF_DEBUG=/dev/null
-DASHQ_UNLESS_DEBUG=-q
-if [[ "$DEBUG" != 0 ]]; then
- STDOUT_IF_DEBUG=/dev/stdout
- STDERR_IF_DEBUG=/dev/stderr
- DASHQ_UNLESS_DEBUG=
-fi
-
-case "$TARGET" in
- debian*)
- FORMAT=deb
- ;;
- ubuntu*)
- FORMAT=deb
- ;;
- centos*)
- FORMAT=rpm
- ;;
- *)
- echo -e "$0: Unknown target '$TARGET'.\n" >&2
- exit 1
- ;;
-esac
-
-if ! [[ -n "$WORKSPACE" ]]; then
- echo >&2 "$helpmessage"
- echo >&2
- echo >&2 "Error: WORKSPACE environment variable not set"
- echo >&2
- exit 1
-fi
-
-if ! [[ -d "$WORKSPACE" ]]; then
- echo >&2 "$helpmessage"
- echo >&2
- echo >&2 "Error: $WORKSPACE is not a directory"
- echo >&2
- exit 1
-fi
-
-# Test for fpm
-fpm --version >/dev/null 2>&1
-
-if [[ "$?" != 0 ]]; then
- echo >&2 "$helpmessage"
- echo >&2
- echo >&2 "Error: fpm not found"
- echo >&2
- exit 1
-fi
-
-RUN_BUILD_PACKAGES_PATH="`dirname \"$0\"`"
-RUN_BUILD_PACKAGES_PATH="`( cd \"$RUN_BUILD_PACKAGES_PATH\" && pwd )`" # absolutized and normalized
-if [ -z "$RUN_BUILD_PACKAGES_PATH" ] ; then
- # error; for some reason, the path is not accessible
- # to the script (e.g. permissions re-evaled after suid)
- exit 1 # fail
-fi
-
-debug_echo "$0 is running from $RUN_BUILD_PACKAGES_PATH"
-debug_echo "Workspace is $WORKSPACE"
-
-if [[ -f /etc/profile.d/rvm.sh ]]; then
- source /etc/profile.d/rvm.sh
- GEM="rvm-exec default gem"
-else
- GEM=gem
-fi
-
-# Make all files world-readable -- jenkins runs with umask 027, and has checked
-# out our git tree here
-chmod o+r "$WORKSPACE" -R
-
-# More cleanup - make sure all executables that we'll package are 755
-# No executables in the sso server package
-#find -type d -name 'bin' |xargs -I {} find {} -type f |xargs -I {} chmod 755 {}
-
-# Now fix our umask to something better suited to building and publishing
-# gems and packages
-umask 0022
-
-debug_echo "umask is" `umask`
-
-if [[ ! -d "$WORKSPACE/packages/$TARGET" ]]; then
- mkdir -p "$WORKSPACE/packages/$TARGET"
-fi
-
-# Build the SSO server package
-handle_rails_package arvados-sso-server "$WORKSPACE" \
- "$WORKSPACE/LICENCE" --url="https://arvados.org" \
- --description="Arvados SSO server - Arvados is a free and open source platform for big data science." \
- --license="Expat license"
-
-exit $EXITCODE
FORMAT=rpm
PYTHON3_PACKAGE=$(rpm -qf "$(which python$PYTHON3_VERSION)" --queryformat '%{NAME}\n')
PYTHON3_PKG_PREFIX=$PYTHON3_PACKAGE
- PYTHON3_PREFIX=/opt/rh/rh-python36/root/usr
+ PYTHON3_PREFIX=/usr
PYTHON3_INSTALL_LIB=lib/python$PYTHON3_VERSION/site-packages
export PYCURL_SSL_LIBRARY=nss
;;
echo "Package $full_pkgname build forced with --force-build, building"
elif [[ "$FORMAT" == "deb" ]]; then
declare -A dd
- dd[debian9]=stretch
dd[debian10]=buster
dd[ubuntu1604]=xenial
dd[ubuntu1804]=bionic
fi
# For some reason fpm excludes need to not start with /.
local exclude_root="${railsdir#/}"
- # .git and packages are for the SSO server, which is built from its
- # repository root.
- local -a exclude_list=(.git packages tmp log coverage Capfile\* \
+ local -a exclude_list=(tmp log coverage Capfile\* \
config/deploy\* config/application.yml)
# for arvados-workbench, we need to have the (dummy) config/database.yml in the package
if [[ "$pkgname" != "arvados-workbench" ]]; then
case "$PACKAGE_TYPE" in
python3)
python=python3
- if [[ "$FORMAT" != "rpm" ]]; then
- pip=pip3
- else
- # In CentOS, we use a different mechanism to get the right version of pip
- pip=pip
- fi
+ pip=pip3
PACKAGE_PREFIX=$PYTHON3_PKG_PREFIX
;;
esac
h3. Debian and Ubuntu
-Debian 9 (stretch) and Ubuntu 16.04 (xenial) ship Ruby 2.3, which is not supported by Arvados. Use "RVM":#rvm to install Ruby 2.5 or later.
+Ubuntu 16.04 (xenial) ships with Ruby 2.3, which is not supported by Arvados. Use "RVM":#rvm to install Ruby 2.5 or later.
Debian 10 (buster) and Ubuntu 18.04 (bionic) and later ship with Ruby 2.5, which is supported by Arvados.
h2(#fromsource). Option 3: Install from source
-Install prerequisites for Debian 8:
+Install prerequisites for Debian 10:
<notextile>
<pre><code><span class="userinput">sudo apt-get install \
- bison build-essential gettext libcurl3 libcurl3-gnutls \
+ bison build-essential gettext libcurl4 \
libcurl4-openssl-dev libpcre3-dev libreadline-dev \
libssl-dev libxslt1.1 zlib1g-dev
</span></code></pre></notextile>
make automake libtool bison sqlite-devel tar
</span></code></pre></notextile>
-Install prerequisites for Ubuntu 12.04 or 14.04:
+Install prerequisites for Ubuntu 16.04:
<notextile>
<pre><code><span class="userinput">sudo apt-get install \
- gawk g++ gcc make libc6-dev libreadline6-dev zlib1g-dev libssl-dev \
- libyaml-dev libsqlite3-dev sqlite3 autoconf libgdbm-dev \
- libncurses5-dev automake libtool bison pkg-config libffi-dev curl
+ bison build-essential gettext libcurl3 \
+ libcurl3-openssl-dev libpcre3-dev libreadline-dev \
+ libssl-dev libxslt1.1 zlib1g-dev
</span></code></pre></notextile>
Build and install Ruby:
<div class="releasenotes">
</notextile>
+h2(#master). development master (as of 2020-10-28)
+
+"Upgrading from 2.1.0":#v2_1_0
+
+h3. Centos7 Python 3 dependency upgraded to python3
+
+Now that Python 3 is part of the base repository in CentOS 7, the Python 3 dependency for Centos7 Arvados packages was changed from SCL rh-python36 to python3.
+
h2(#v2_1_0). v2.1.0 (2020-10-13)
"Upgrading from 2.0.0":#v2_0_0
h2(#introduction). Introduction
-This assumes you already have a Slurm cluster, and have "set up all of your compute nodes":install-compute-node.html . For information on installing Slurm, see "this install guide":https://slurm.schedmd.com/quickstart_admin.html
+This assumes you already have a Slurm cluster, and have "set up all of your compute nodes":install-compute-node.html. Slurm packages are available for CentOS, Debian and Ubuntu. Please see your distribution package repositories. For information on installing Slurm from source, see "this install guide":https://slurm.schedmd.com/quickstart_admin.html
The Arvados Slurm dispatcher can run on any node that can submit requests to both the Arvados API server and the Slurm controller (via @sbatch@). It is not resource-intensive, so you can run it on the API server node.
|_. Distribution|_. State|_. Last supported version|
|CentOS 7|Supported|Latest|
|Debian 10 ("buster")|Supported|Latest|
-|Debian 9 ("stretch")|Supported|Latest|
|Ubuntu 18.04 ("bionic")|Supported|Latest|
|Ubuntu 16.04 ("xenial")|Supported|Latest|
-|Ubuntu 14.04 ("trusty")|EOL|1.4.3|
+|Debian 9 ("stretch")|EOL|Latest 2.1.X release|
|Debian 8 ("jessie")|EOL|1.4.3|
+|Ubuntu 14.04 ("trusty")|EOL|1.4.3|
|Ubuntu 12.04 ("precise")|EOL|8ed7b6dd5d4df93a3f37096afe6d6f81c2a7ef6e (2017-05-03)|
|Debian 7 ("wheezy")|EOL|997479d1408139e96ecdb42a60b4f727f814f6c9 (2016-12-28)|
|CentOS 6 |EOL|997479d1408139e96ecdb42a60b4f727f814f6c9 (2016-12-28)|
{% include 'note_python_sc' %}
# Install PostgreSQL
- <notextile><pre># <span class="userinput">yum install rh-postgresql95 rh-postgresql95-postgresql-contrib</span>
-~$ <span class="userinput">scl enable rh-postgresql95 bash</span></pre></notextile>
+ <notextile><pre># <span class="userinput">yum install rh-postgresql12 rh-postgresql12-postgresql-contrib</span>
+~$ <span class="userinput">scl enable rh-postgresql12 bash</span></pre></notextile>
# Initialize the database
<notextile><pre># <span class="userinput">postgresql-setup initdb</span></pre></notextile>
# Configure the database to accept password connections
<notextile><pre><code># <span class="userinput">sed -ri -e 's/^(host +all +all +(127\.0\.0\.1\/32|::1\/128) +)ident$/\1md5/' /var/lib/pgsql/data/pg_hba.conf</span></code></pre></notextile>
# Configure the database to launch at boot and start now
- <notextile><pre># <span class="userinput">systemctl enable --now rh-postgresql95-postgresql</span></pre></notextile>
+ <notextile><pre># <span class="userinput">systemctl enable --now rh-postgresql12-postgresql</span></pre></notextile>
h3(#debian). Debian or Ubuntu
-Debian 8 (Jessie) and Ubuntu 16.04 (Xenial) and later versions include a sufficiently recent version of Postgres.
-
-Ubuntu 14.04 (Trusty) requires an updated PostgreSQL version, see "the PostgreSQL ubuntu repository":https://www.postgresql.org/download/linux/ubuntu/
+Debian 10 (Buster) and Ubuntu 16.04 (Xenial) and later versions include a sufficiently recent version of Postgres.
# Install PostgreSQL
<notextile><pre># <span class="userinput">apt-get --no-install-recommends install postgresql postgresql-contrib</span></pre></notextile>
table(table table-bordered table-condensed).
|_. OS version|_. Command|
|Debian 10 ("buster")|<notextile><code><span class="userinput">echo "deb http://apt.arvados.org/ buster main" | tee /etc/apt/sources.list.d/arvados.list</span></code></notextile>|
-|Debian 9 ("stretch")|<notextile><code><span class="userinput">echo "deb http://apt.arvados.org/ stretch main" | tee /etc/apt/sources.list.d/arvados.list</span></code></notextile>|
|Ubuntu 18.04 ("bionic")[1]|<notextile><code><span class="userinput">echo "deb http://apt.arvados.org/ bionic main" | tee /etc/apt/sources.list.d/arvados.list</span></code></notextile>|
|Ubuntu 16.04 ("xenial")[1]|<notextile><code><span class="userinput">echo "deb http://apt.arvados.org/ xenial main" | tee /etc/apt/sources.list.d/arvados.list</span></code></notextile>|
# "Install Ruby":../../install/ruby.html
# "Install the Python SDK":../python/sdk-python.html
-The SDK uses @curl@ which depends on the @libcurl@ C library. To build the module you may have to install additional packages. On Debian 9 this is:
+The SDK uses @curl@ which depends on the @libcurl@ C library. To build the module you may have to install additional packages. On Debian 10 this is:
<pre>
$ apt-get install build-essential libcurl4-openssl-dev
Note:
-The SDK uses @pycurl@ which depends on the @libcurl@ C library. To build the module you may have to first install additional packages. On Debian 9 this is:
-
-<pre>
-$ apt-get install git build-essential python-dev libcurl4-openssl-dev libssl1.0-dev python-llfuse
-</pre>
-
-For Python 3 this is:
+The SDK uses @pycurl@ which depends on the @libcurl@ C library. To build the module you may have to first install additional packages. On Debian 10 this is:
<pre>
$ apt-get install git build-essential python3-dev libcurl4-openssl-dev libssl1.0-dev python3-llfuse
Note:
-The SDK uses @pycurl@ which depends on the @libcurl@ C library. To build the module you may have to first install additional packages. On Debian 9 this is:
+The SDK uses @pycurl@ which depends on the @libcurl@ C library. To build the module you may have to first install additional packages. On Debian 10 this is:
<pre>
-$ apt-get install git build-essential python-dev libcurl4-openssl-dev libssl1.0-dev python-llfuse
-</pre>
-
-For Python 3 this is:
-
-<pre>
-$ apt-get install git build-essential python3-dev libcurl4-openssl-dev libssl1.0-dev python3-llfuse
+$ apt-get install git build-essential python3-dev libcurl4-openssl-dev libssl-dev python3-llfuse
</pre>
h3. Usage
Note:
-The SDK uses @pycurl@ which depends on the @libcurl@ C library. To build the module you may have to first install additional packages. On Debian 9 this is:
+The SDK uses @pycurl@ which depends on the @libcurl@ C library. To build the module you may have to first install additional packages. On Debian 10 this is:
<pre>
-$ apt-get install git build-essential python-dev libcurl4-openssl-dev libssl1.0-dev
-</pre>
-
-For Python 3 this is
-
-<pre>
-$ apt-get install git build-essential python3-dev libcurl4-openssl-dev libssl1.0-dev
+$ apt-get install git build-essential python3-dev libcurl4-openssl-dev libssl-dev
</pre>
If your version of @pip@ is 1.4 or newer, the @pip install@ command might give an error: "Could not find a version that satisfies the requirement arvados-python-client". If this happens, try @pip install --pre arvados-python-client@.
# "Install Ruby":../../install/ruby.html
-The SDK uses @curl@ which depends on the @libcurl@ C library. To build the module you may have to install additional packages. On Debian 9 this is:
+The SDK uses @curl@ which depends on the @libcurl@ C library. To build the module you may have to install additional packages. On Debian 10 this is:
<pre>
$ apt-get install build-essential libcurl4-openssl-dev
h3. 7. Set Docker image, base command, and input port for "sort" tool
-The "Docker Repository" is the name:tag of a "Docker image uploaded Arvados.":{{site.baseurl}}/user/topics/arv-docker.html (Use @arv-keepdocker --pull debian:9@) You can also find prepackaged bioinformatics tools on various sites, such as http://dockstore.org and http://biocontainers.pro/ .
+The "Docker Repository" is the name:tag of a "Docker image uploaded Arvados.":{{site.baseurl}}/user/topics/arv-docker.html (Use @arv-keepdocker --pull debian:10@) You can also find prepackaged bioinformatics tools on various sites, such as http://dockstore.org and http://biocontainers.pro/ .
!(screenshot)c6.png!
<pre>
requirements:
DockerRequirement:
- dockerPull: "debian:9"
+ dockerPull: "debian:10"
arv:dockerCollectionPDH: "feaf1fc916103d7cdab6489e1f8c3a2b+174"
</pre>
#
# SPDX-License-Identifier: Apache-2.0
-# Based on Debian Stretch
+# Based on Debian
FROM debian:buster-slim
MAINTAINER Arvados Package Maintainers <packaging@arvados.org>
func fetchRemoteCollectionByUUID(
h *genericFederatedRequestHandler,
effectiveMethod string,
- clusterId *string,
+ clusterID *string,
uuid string,
remainder string,
w http.ResponseWriter,
if uuid != "" {
// Collection UUID GET request
- *clusterId = uuid[0:5]
- if *clusterId != "" && *clusterId != h.handler.Cluster.ClusterID {
+ *clusterID = uuid[0:5]
+ if *clusterID != "" && *clusterID != h.handler.Cluster.ClusterID {
// request for remote collection by uuid
- resp, err := h.handler.remoteClusterRequest(*clusterId, req)
- newResponse, err := rewriteSignatures(*clusterId, "", resp, err)
+ resp, err := h.handler.remoteClusterRequest(*clusterID, req)
+ newResponse, err := rewriteSignatures(*clusterID, "", resp, err)
h.handler.proxy.ForwardResponse(w, newResponse, err)
return true
}
func fetchRemoteCollectionByPDH(
h *genericFederatedRequestHandler,
effectiveMethod string,
- clusterId *string,
+ clusterID *string,
uuid string,
remainder string,
w http.ResponseWriter,
func remoteContainerRequestCreate(
h *genericFederatedRequestHandler,
effectiveMethod string,
- clusterId *string,
+ clusterID *string,
uuid string,
remainder string,
w http.ResponseWriter,
return true
}
- if *clusterId == "" || *clusterId == h.handler.Cluster.ClusterID {
+ if *clusterID == "" || *clusterID == h.handler.Cluster.ClusterID {
// Submitting container request to local cluster. No
// need to set a runtime_token (rails api will create
// one when the container runs) or do a remote cluster
req.ContentLength = int64(buf.Len())
req.Header.Set("Content-Length", fmt.Sprintf("%v", buf.Len()))
- resp, err := h.handler.remoteClusterRequest(*clusterId, req)
+ resp, err := h.handler.remoteClusterRequest(*clusterID, req)
h.handler.proxy.ForwardResponse(w, resp, err)
return true
}
type federatedRequestDelegate func(
h *genericFederatedRequestHandler,
effectiveMethod string,
- clusterId *string,
+ clusterID *string,
uuid string,
remainder string,
w http.ResponseWriter,
clusterID string, uuids []string) (rp []map[string]interface{}, kind string, err error) {
found := make(map[string]bool)
- prev_len_uuids := len(uuids) + 1
+ prevLenUuids := len(uuids) + 1
// Loop while
// (1) there are more uuids to query
// (2) we're making progress - on each iteration the set of
// uuids we are expecting for must shrink.
- for len(uuids) > 0 && len(uuids) < prev_len_uuids {
+ for len(uuids) > 0 && len(uuids) < prevLenUuids {
var remoteReq http.Request
remoteReq.Header = req.Header
remoteReq.Method = "POST"
l = append(l, u)
}
}
- prev_len_uuids = len(uuids)
+ prevLenUuids = len(uuids)
uuids = l
}
}
func (h *genericFederatedRequestHandler) handleMultiClusterQuery(w http.ResponseWriter,
- req *http.Request, clusterId *string) bool {
+ req *http.Request, clusterID *string) bool {
var filters [][]interface{}
err := json.Unmarshal([]byte(req.Form.Get("filters")), &filters)
if rhs, ok := filter[2].([]interface{}); ok {
for _, i := range rhs {
if u, ok := i.(string); ok && len(u) == 27 {
- *clusterId = u[0:5]
+ *clusterID = u[0:5]
queryClusters[u[0:5]] = append(queryClusters[u[0:5]], u)
- expectCount += 1
+ expectCount++
}
}
}
} else if op == "=" {
if u, ok := filter[2].(string); ok && len(u) == 27 {
- *clusterId = u[0:5]
+ *clusterID = u[0:5]
queryClusters[u[0:5]] = append(queryClusters[u[0:5]], u)
- expectCount += 1
+ expectCount++
}
} else {
return false
func (h *genericFederatedRequestHandler) ServeHTTP(w http.ResponseWriter, req *http.Request) {
m := h.matcher.FindStringSubmatch(req.URL.Path)
- clusterId := ""
+ clusterID := ""
if len(m) > 0 && m[2] != "" {
- clusterId = m[2]
+ clusterID = m[2]
}
// Get form parameters from URL and form body (if POST).
// Check if the parameters have an explicit cluster_id
if req.Form.Get("cluster_id") != "" {
- clusterId = req.Form.Get("cluster_id")
+ clusterID = req.Form.Get("cluster_id")
}
// Handle the POST-as-GET special case (workaround for large
}
if effectiveMethod == "GET" &&
- clusterId == "" &&
+ clusterID == "" &&
req.Form.Get("filters") != "" &&
- h.handleMultiClusterQuery(w, req, &clusterId) {
+ h.handleMultiClusterQuery(w, req, &clusterID) {
return
}
uuid = m[1][1:]
}
for _, d := range h.delegates {
- if d(h, effectiveMethod, &clusterId, uuid, m[3], w, req) {
+ if d(h, effectiveMethod, &clusterID, uuid, m[3], w, req) {
return
}
}
- if clusterId == "" || clusterId == h.handler.Cluster.ClusterID {
+ if clusterID == "" || clusterID == h.handler.Cluster.ClusterID {
h.next.ServeHTTP(w, req)
} else {
- resp, err := h.handler.remoteClusterRequest(clusterId, req)
+ resp, err := h.handler.remoteClusterRequest(clusterID, req)
h.handler.proxy.ForwardResponse(w, resp, err)
}
}
// cached negative result (value is expiry time)
if time.Now().Before(exp) {
return nil
- } else {
- ta.cache.Remove(tok)
}
+ ta.cache.Remove(tok)
} else {
// cached positive result
aca := cached.(arvados.APIClientAuthorization)
return nil
}
-// List UUIDs of active crunch-run processes.
+// ListProcesses lists UUIDs of active crunch-run processes.
func ListProcesses(stdout, stderr io.Writer) int {
// filepath.Walk does not follow symlinks, so we must walk
// lockdir+"/." in case lockdir itself is a symlink.
//
// SPDX-License-Identifier: Apache-2.0
-// package service provides a cmd.Handler that brings up a system service.
+// Package service provides a cmd.Handler that brings up a system service.
package service
import (
s.summary = "Arvados CLI tools"
s.description = "Arvados command line tools, git commit #{git_hash}"
s.authors = ["Arvados Authors"]
- s.email = 'gem-dev@arvados.org'
+ s.email = 'packaging@arvados.org'
#s.bindir = '.'
s.licenses = ['Apache-2.0']
s.files = ["bin/arv", "bin/arv-tag", "LICENSE-2.0.txt"]
fpm_depends+=(nodejs)
case "$TARGET" in
- debian9 | ubuntu1604)
+ ubuntu1604)
fpm_depends+=(libcurl3-gnutls)
;;
debian* | ubuntu*)
stubs.keep_client = keep_client2
stubs.docker_images = {
"arvados/jobs:"+arvados_cwl.__version__: [("zzzzz-4zz18-zzzzzzzzzzzzzd3", "")],
- "debian:8": [("zzzzz-4zz18-zzzzzzzzzzzzzd4", "")],
+ "debian:buster-slim": [("zzzzz-4zz18-zzzzzzzzzzzzzd4", "")],
"arvados/jobs:123": [("zzzzz-4zz18-zzzzzzzzzzzzzd5", "")],
"arvados/jobs:latest": [("zzzzz-4zz18-zzzzzzzzzzzzzd6", "")],
}
],
'requirements': [
{
- 'dockerPull': 'debian:8',
+ 'dockerPull': 'debian:buster-slim',
'class': 'DockerRequirement',
"http://arvados.org/cwl#dockerCollectionPDH": "999999999999999999999999999999d4+99"
}
"hints": [
{
"class": "DockerRequirement",
- "dockerPull": "debian:8",
+ "dockerPull": "debian:buster-slim",
"http://arvados.org/cwl#dockerCollectionPDH": "999999999999999999999999999999d4+99"
},
{
cwlVersion: v1.0
requirements:
- class: DockerRequirement
- dockerPull: debian:8
+ dockerPull: debian:buster-slim
inputs:
- id: x
type: File
cwlVersion: v1.0
requirements:
- class: DockerRequirement
- dockerPull: debian:8
+ dockerPull: debian:buster-slim
inputs:
- id: x
type: File
requirements:
InlineJavascriptRequirement: {}
DockerRequirement:
- dockerPull: debian:stretch-slim
+ dockerPull: debian:buster-slim
inputs:
d: Directory
outputs:
type: string
outputs: []
requirements:
- - {class: DockerRequirement, dockerPull: 'debian:8'}
+ - {class: DockerRequirement, dockerPull: 'debian:buster-slim'}
"requirements": [
{
"class": "DockerRequirement",
- "dockerPull": "debian:8",
+ "dockerPull": "debian:buster-slim",
"http://arvados.org/cwl#dockerCollectionPDH": "999999999999999999999999999999d4+99"
}
]
"requirements": [
{
"class": "DockerRequirement",
- "dockerPull": "debian:8",
+ "dockerPull": "debian:buster-slim",
"http://arvados.org/cwl#dockerCollectionPDH": "999999999999999999999999999999d4+99"
}
]
"cwltool:Secrets":
secrets: [pw]
DockerRequirement:
- dockerPull: debian:8
+ dockerPull: debian:buster-slim
inputs:
pw: string
outputs:
- class: CommandLineTool
requirements:
- class: DockerRequirement
- dockerPull: debian:8
+ dockerPull: debian:buster-slim
'http://arvados.org/cwl#dockerCollectionPDH': 999999999999999999999999999999d4+99
inputs:
- id: '#submit_tool.cwl/x'
# (This dockerfile file must be located in the arvados/sdk/ directory because
# of the docker build root.)
-FROM debian:9
-MAINTAINER Peter Amstutz <peter.amstutz@curii.com>
+FROM debian:buster-slim
+MAINTAINER Arvados Package Maintainers <packaging@arvados.org>
ENV DEBIAN_FRONTEND noninteractive
defaultRequestID string
}
-// The default http.Client used by a Client with Insecure==true and
-// Client==nil.
+// InsecureHTTPClient is the default http.Client used by a Client with
+// Insecure==true and Client==nil.
var InsecureHTTPClient = &http.Client{
Transport: &http.Transport{
TLSClientConfig: &tls.Config{
InsecureSkipVerify: true}}}
-// The default http.Client used by a Client otherwise.
+// DefaultSecureClient is the default http.Client used by a Client otherwise.
var DefaultSecureClient = &http.Client{}
// NewClientFromConfig creates a new Client that uses the endpoints in
Properties map[string]interface{} `json:"properties"`
}
-// UserList is an arvados#userList resource.
+// LinkList is an arvados#linkList resource.
type LinkList struct {
Items []Link `json:"items"`
ItemsAvailable int `json:"items_available"`
//
// SPDX-License-Identifier: Apache-2.0
-/* Provides low-level Get/Put primitives for accessing Arvados Keep blocks. */
+// Package keepclient provides low-level Get/Put primitives for accessing
+// Arvados Keep blocks.
package keepclient
import (
"git.arvados.org/arvados.git/sdk/go/httpserver"
)
-// A Keep "block" is 64MB.
+// BLOCKSIZE defines the length of a Keep "block", which is 64MB.
const BLOCKSIZE = 64 * 1024 * 1024
var (
// ErrIncompleteIndex is returned when the Index response does not end with a new empty line
var ErrIncompleteIndex = errors.New("Got incomplete index")
-const X_Keep_Desired_Replicas = "X-Keep-Desired-Replicas"
-const X_Keep_Replicas_Stored = "X-Keep-Replicas-Stored"
+const XKeepDesiredReplicas = "X-Keep-Desired-Replicas"
+const XKeepReplicasStored = "X-Keep-Replicas-Stored"
type HTTPClient interface {
Do(*http.Request) (*http.Response, error)
}
}
-// Put a block given the block hash, a reader, and the number of bytes
+// PutHR puts a block given the block hash, a reader, and the number of bytes
// to read from the reader (which must be between 0 and BLOCKSIZE).
//
// Returns the locator for the written block, the number of replicas
var errs []string
- tries_remaining := 1 + kc.Retries
+ triesRemaining := 1 + kc.Retries
serversToTry := kc.getSortedRoots(locator)
var retryList []string
- for tries_remaining > 0 {
- tries_remaining -= 1
+ for triesRemaining > 0 {
+ triesRemaining -= 1
retryList = nil
for _, host := range serversToTry {
req.Header.Add("X-Request-Id", reqid)
req.Header.Add("Authorization", "OAuth2 "+this.Arvados.ApiToken)
req.Header.Add("Content-Type", "application/octet-stream")
- req.Header.Add(X_Keep_Desired_Replicas, fmt.Sprint(this.Want_replicas))
+ req.Header.Add(XKeepDesiredReplicas, fmt.Sprint(this.Want_replicas))
if len(this.StorageClasses) > 0 {
req.Header.Add("X-Keep-Storage-Classes", strings.Join(this.StorageClasses, ", "))
}
}
rep := 1
- if xr := resp.Header.Get(X_Keep_Replicas_Stored); xr != "" {
+ if xr := resp.Header.Get(XKeepReplicasStored); xr != "" {
fmt.Sscanf(xr, "%d", &rep)
}
1. Add this Arvados repository to your sources list::
- deb http://apt.arvados.org/ stretch main
+ deb http://apt.arvados.org/ buster main
2. Update your package list.
-3. Install the ``python-arvados-python-client`` package.
+3. Install the ``python3-arvados-python-client`` package.
Configuration
-------------
s.summary = "Arvados client library"
s.description = "Arvados client library, git commit #{git_hash}"
s.authors = ["Arvados Authors"]
- s.email = 'gem-dev@curoverse.com'
+ s.email = 'packaging@arvados.org'
s.licenses = ['Apache-2.0']
s.files = ["lib/arvados.rb", "lib/arvados/google_api_client.rb",
"lib/arvados/collection.rb", "lib/arvados/keep.rb",
--- /dev/null
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: AGPL-3.0
+[Unit]
+Description=Arvados Crunch Dispatcher for LOCAL service
+Documentation=https://doc.arvados.org/
+After=network.target
+
+# systemd==229 (ubuntu:xenial) obeys StartLimitInterval in the [Unit] section
+StartLimitInterval=0
+
+# systemd>=230 (debian:9) obeys StartLimitIntervalSec in the [Unit] section
+StartLimitIntervalSec=0
+
+[Service]
+Type=simple
+EnvironmentFile=-/etc/arvados/crunch-dispatch-local-credentials
+ExecStart=/usr/bin/crunch-dispatch-local -poll-interval=1 -crunch-run-command=/usr/bin/crunch-run
+# Set a reasonable default for the open file limit
+LimitNOFILE=65536
+Restart=always
+RestartSec=1
+LimitNOFILE=1000000
+
+# systemd<=219 (centos:7, debian:8, ubuntu:trusty) obeys StartLimitInterval in the [Service] section
+StartLimitInterval=0
+
+[Install]
+WantedBy=multi-user.target
--- /dev/null
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: AGPL-3.0
+
+fpm_depends+=(crunch-run)
# SPDX-License-Identifier: Apache-2.0
case "$TARGET" in
- debian9 | ubuntu1604)
+ ubuntu1604)
fpm_depends+=()
;;
debian* | ubuntu*)
URL: "http://" + s.testServer.Addr,
SigningRegion: "custom-signing-region",
}, nil
- } else {
- return endpoints.NewDefaultResolver().ResolveEndpoint(service, region)
}
+ return endpoints.NewDefaultResolver().ResolveEndpoint(service, region)
})
client := s3.New(cfg)
client.ForcePathStyle = true
expireTime int64
}
-// Cache the token and set an expire time. If we already have an expire time
-// on the token, it is not updated.
-func (this *APITokenCache) RememberToken(token string) {
- this.lock.Lock()
- defer this.lock.Unlock()
+// RememberToken caches the token and set an expire time. If we already have
+// an expire time on the token, it is not updated.
+func (cache *APITokenCache) RememberToken(token string) {
+ cache.lock.Lock()
+ defer cache.lock.Unlock()
now := time.Now().Unix()
- if this.tokens[token] == 0 {
- this.tokens[token] = now + this.expireTime
+ if cache.tokens[token] == 0 {
+ cache.tokens[token] = now + cache.expireTime
}
}
-// Check if the cached token is known and still believed to be valid.
-func (this *APITokenCache) RecallToken(token string) bool {
- this.lock.Lock()
- defer this.lock.Unlock()
+// RecallToken checks if the cached token is known and still believed to be
+// valid.
+func (cache *APITokenCache) RecallToken(token string) bool {
+ cache.lock.Lock()
+ defer cache.lock.Unlock()
now := time.Now().Unix()
- if this.tokens[token] == 0 {
+ if cache.tokens[token] == 0 {
// Unknown token
return false
- } else if now < this.tokens[token] {
+ } else if now < cache.tokens[token] {
// Token is known and still valid
return true
} else {
// Token is expired
- this.tokens[token] = 0
+ cache.tokens[token] = 0
return false
}
}
+// GetRemoteAddress returns a string with the remote address for the request.
+// If the X-Forwarded-For header is set and has a non-zero length, it returns a
+// string made from a comma separated list of all the remote addresses,
+// starting with the one(s) from the X-Forwarded-For header.
func GetRemoteAddress(req *http.Request) string {
if xff := req.Header.Get("X-Forwarded-For"); xff != "" {
return xff + "," + req.RemoteAddr
// Check if the client specified the number of replicas
if req.Header.Get("X-Keep-Desired-Replicas") != "" {
var r int
- _, err := fmt.Sscanf(req.Header.Get(keepclient.X_Keep_Desired_Replicas), "%d", &r)
+ _, err := fmt.Sscanf(req.Header.Get(keepclient.XKeepDesiredReplicas), "%d", &r)
if err == nil {
kc.Want_replicas = r
}
}
// Tell the client how many successful PUTs we accomplished
- resp.Header().Set(keepclient.X_Keep_Replicas_Stored, fmt.Sprintf("%d", wroteReplicas))
+ resp.Header().Set(keepclient.XKeepReplicasStored, fmt.Sprintf("%d", wroteReplicas))
switch err.(type) {
case nil:
s.summary = "Set up local login accounts for Arvados users"
s.description = "Creates and updates local login accounts for Arvados users. Built from git commit #{git_hash}"
s.authors = ["Arvados Authors"]
- s.email = 'gem-dev@curoverse.com'
+ s.email = 'packaging@arvados.org'
s.licenses = ['AGPL-3.0']
s.files = ["bin/arvados-login-sync", "agpl-3.0.txt"]
s.executables << "arvados-login-sync"
projects / arvados.git / commitdiff