Documentation for Arvados classes is generated automatically now
authorFuad Muhic <fmuhic@capeannenterprises.com>
Mon, 26 Feb 2018 15:30:44 +0000 (16:30 +0100)
committerFuad Muhic <fmuhic@capeannenterprises.com>
Mon, 26 Feb 2018 15:30:44 +0000 (16:30 +0100)
Arvados-DCO-1.1-Signed-off-by: Fuad Muhic <fmuhic@capeannenterprises.com>

50 files changed:
sdk/R/R/Arvados.R
sdk/R/R/ArvadosClasses.R
sdk/R/R/autoGenAPI.R
sdk/R/man/ApiClient.Rd [new file with mode: 0644]
sdk/R/man/ApiClientAuthorization.Rd [new file with mode: 0644]
sdk/R/man/ApiClientAuthorizationList.Rd [new file with mode: 0644]
sdk/R/man/ApiClientList.Rd [new file with mode: 0644]
sdk/R/man/AuthorizedKey.Rd [new file with mode: 0644]
sdk/R/man/AuthorizedKeyList.Rd [new file with mode: 0644]
sdk/R/man/CollectionList.Rd [new file with mode: 0644]
sdk/R/man/Container.Rd [new file with mode: 0644]
sdk/R/man/ContainerList.Rd [new file with mode: 0644]
sdk/R/man/ContainerRequest.Rd [new file with mode: 0644]
sdk/R/man/ContainerRequestList.Rd [new file with mode: 0644]
sdk/R/man/Group.Rd [new file with mode: 0644]
sdk/R/man/GroupList.Rd [new file with mode: 0644]
sdk/R/man/Human.Rd [new file with mode: 0644]
sdk/R/man/HumanList.Rd [new file with mode: 0644]
sdk/R/man/Job.Rd [new file with mode: 0644]
sdk/R/man/JobList.Rd [new file with mode: 0644]
sdk/R/man/JobTask.Rd [new file with mode: 0644]
sdk/R/man/JobTaskList.Rd [new file with mode: 0644]
sdk/R/man/KeepDisk.Rd [new file with mode: 0644]
sdk/R/man/KeepDiskList.Rd [new file with mode: 0644]
sdk/R/man/KeepService.Rd [new file with mode: 0644]
sdk/R/man/KeepServiceList.Rd [new file with mode: 0644]
sdk/R/man/Link.Rd [new file with mode: 0644]
sdk/R/man/LinkList.Rd [new file with mode: 0644]
sdk/R/man/Log.Rd [new file with mode: 0644]
sdk/R/man/LogList.Rd [new file with mode: 0644]
sdk/R/man/Node.Rd [new file with mode: 0644]
sdk/R/man/NodeList.Rd [new file with mode: 0644]
sdk/R/man/PipelineInstance.Rd [new file with mode: 0644]
sdk/R/man/PipelineInstanceList.Rd [new file with mode: 0644]
sdk/R/man/PipelineTemplate.Rd [new file with mode: 0644]
sdk/R/man/PipelineTemplateList.Rd [new file with mode: 0644]
sdk/R/man/Repository.Rd [new file with mode: 0644]
sdk/R/man/RepositoryList.Rd [new file with mode: 0644]
sdk/R/man/Specimen.Rd [new file with mode: 0644]
sdk/R/man/SpecimenList.Rd [new file with mode: 0644]
sdk/R/man/Trait.Rd [new file with mode: 0644]
sdk/R/man/TraitList.Rd [new file with mode: 0644]
sdk/R/man/User.Rd [new file with mode: 0644]
sdk/R/man/UserAgreement.Rd [new file with mode: 0644]
sdk/R/man/UserAgreementList.Rd [new file with mode: 0644]
sdk/R/man/UserList.Rd [new file with mode: 0644]
sdk/R/man/VirtualMachine.Rd [new file with mode: 0644]
sdk/R/man/VirtualMachineList.Rd [new file with mode: 0644]
sdk/R/man/Workflow.Rd [new file with mode: 0644]
sdk/R/man/WorkflowList.Rd [new file with mode: 0644]

index 7c077c03a14bbbb82a69b1b78af18b7a897ad3c2..6aa17cd3a6241038d1b0032656c56b53930a751b 100644 (file)
@@ -46,8 +46,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -59,19 +58,17 @@ Arvados <- R6::R6Class(
                                is_active = resource$is_active, username = resource$username)
                },
 
-               users.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               users.index = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("users")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -81,8 +78,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       UserList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -104,8 +100,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -133,8 +128,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -162,8 +156,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -191,8 +184,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -220,8 +212,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -249,8 +240,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -262,18 +252,16 @@ Arvados <- R6::R6Class(
                                is_active = resource$is_active, username = resource$username)
                },
 
-               users.setup = function(
-                               user = NULL, openid_prefix = NULL, repo_name = NULL,
-                               vm_uuid = NULL, send_notification_email = "false")
+               users.setup = function(user = NULL, openid_prefix = NULL,
+                       repo_name = NULL, vm_uuid = NULL, send_notification_email = "false")
                {
                        endPoint <- stringr::str_interp("users/setup")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       user = user, openid_prefix = openid_prefix,
-                                       repo_name = repo_name, vm_uuid = vm_uuid,
-                                       send_notification_email = send_notification_email)
+                       queryArgs <- list(user = user, openid_prefix = openid_prefix,
+                               repo_name = repo_name, vm_uuid = vm_uuid,
+                               send_notification_email = send_notification_email)
                        body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
@@ -283,8 +271,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -312,8 +299,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -341,8 +327,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -354,19 +339,17 @@ Arvados <- R6::R6Class(
                                is_active = resource$is_active, username = resource$username)
                },
 
-               users.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               users.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("users")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -376,8 +359,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       UserList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -399,8 +381,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -428,8 +409,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       User$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       User$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -457,10 +437,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorization$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               api_token = resource$api_token, api_client_id = resource$api_client_id,
-                               user_id = resource$user_id, created_by_ip_address = resource$created_by_ip_address,
+                       ApiClientAuthorization$new(uuid = resource$uuid,
+                               etag = resource$etag, api_token = resource$api_token,
+                               api_client_id = resource$api_client_id, user_id = resource$user_id,
+                               created_by_ip_address = resource$created_by_ip_address,
                                last_used_by_ip_address = resource$last_used_by_ip_address,
                                last_used_at = resource$last_used_at, expires_at = resource$expires_at,
                                created_at = resource$created_at, updated_at = resource$updated_at,
@@ -468,19 +448,18 @@ Arvados <- R6::R6Class(
                                scopes = resource$scopes)
                },
 
-               api_client_authorizations.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               api_client_authorizations.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("api_client_authorizations")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -490,15 +469,14 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorizationList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       ApiClientAuthorizationList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               api_client_authorizations.create = function(
-                               api_client_authorization, ensure_unique_name = "false")
+               api_client_authorizations.create = function(api_client_authorization,
+                       ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("api_client_authorizations")
                        url <- paste0(private$host, endPoint)
@@ -514,10 +492,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorization$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               api_token = resource$api_token, api_client_id = resource$api_client_id,
-                               user_id = resource$user_id, created_by_ip_address = resource$created_by_ip_address,
+                       ApiClientAuthorization$new(uuid = resource$uuid,
+                               etag = resource$etag, api_token = resource$api_token,
+                               api_client_id = resource$api_client_id, user_id = resource$user_id,
+                               created_by_ip_address = resource$created_by_ip_address,
                                last_used_by_ip_address = resource$last_used_by_ip_address,
                                last_used_at = resource$last_used_at, expires_at = resource$expires_at,
                                created_at = resource$created_at, updated_at = resource$updated_at,
@@ -541,10 +519,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorization$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               api_token = resource$api_token, api_client_id = resource$api_client_id,
-                               user_id = resource$user_id, created_by_ip_address = resource$created_by_ip_address,
+                       ApiClientAuthorization$new(uuid = resource$uuid,
+                               etag = resource$etag, api_token = resource$api_token,
+                               api_client_id = resource$api_client_id, user_id = resource$user_id,
+                               created_by_ip_address = resource$created_by_ip_address,
                                last_used_by_ip_address = resource$last_used_by_ip_address,
                                last_used_at = resource$last_used_at, expires_at = resource$expires_at,
                                created_at = resource$created_at, updated_at = resource$updated_at,
@@ -568,10 +546,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorization$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               api_token = resource$api_token, api_client_id = resource$api_client_id,
-                               user_id = resource$user_id, created_by_ip_address = resource$created_by_ip_address,
+                       ApiClientAuthorization$new(uuid = resource$uuid,
+                               etag = resource$etag, api_token = resource$api_token,
+                               api_client_id = resource$api_client_id, user_id = resource$user_id,
+                               created_by_ip_address = resource$created_by_ip_address,
                                last_used_by_ip_address = resource$last_used_by_ip_address,
                                last_used_at = resource$last_used_at, expires_at = resource$expires_at,
                                created_at = resource$created_at, updated_at = resource$updated_at,
@@ -585,8 +563,8 @@ Arvados <- R6::R6Class(
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       api_client_id = api_client_id, scopes = scopes)
+                       queryArgs <- list(api_client_id = api_client_id,
+                               scopes = scopes)
                        body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
@@ -596,10 +574,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorization$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               api_token = resource$api_token, api_client_id = resource$api_client_id,
-                               user_id = resource$user_id, created_by_ip_address = resource$created_by_ip_address,
+                       ApiClientAuthorization$new(uuid = resource$uuid,
+                               etag = resource$etag, api_token = resource$api_token,
+                               api_client_id = resource$api_client_id, user_id = resource$user_id,
+                               created_by_ip_address = resource$created_by_ip_address,
                                last_used_by_ip_address = resource$last_used_by_ip_address,
                                last_used_at = resource$last_used_at, expires_at = resource$expires_at,
                                created_at = resource$created_at, updated_at = resource$updated_at,
@@ -623,10 +601,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorization$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               api_token = resource$api_token, api_client_id = resource$api_client_id,
-                               user_id = resource$user_id, created_by_ip_address = resource$created_by_ip_address,
+                       ApiClientAuthorization$new(uuid = resource$uuid,
+                               etag = resource$etag, api_token = resource$api_token,
+                               api_client_id = resource$api_client_id, user_id = resource$user_id,
+                               created_by_ip_address = resource$created_by_ip_address,
                                last_used_by_ip_address = resource$last_used_by_ip_address,
                                last_used_at = resource$last_used_at, expires_at = resource$expires_at,
                                created_at = resource$created_at, updated_at = resource$updated_at,
@@ -634,19 +612,18 @@ Arvados <- R6::R6Class(
                                scopes = resource$scopes)
                },
 
-               api_client_authorizations.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               api_client_authorizations.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("api_client_authorizations")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -656,10 +633,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorizationList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       ApiClientAuthorizationList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -679,10 +655,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorization$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               api_token = resource$api_token, api_client_id = resource$api_client_id,
-                               user_id = resource$user_id, created_by_ip_address = resource$created_by_ip_address,
+                       ApiClientAuthorization$new(uuid = resource$uuid,
+                               etag = resource$etag, api_token = resource$api_token,
+                               api_client_id = resource$api_client_id, user_id = resource$user_id,
+                               created_by_ip_address = resource$created_by_ip_address,
                                last_used_by_ip_address = resource$last_used_by_ip_address,
                                last_used_at = resource$last_used_at, expires_at = resource$expires_at,
                                created_at = resource$created_at, updated_at = resource$updated_at,
@@ -706,10 +682,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientAuthorization$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               api_token = resource$api_token, api_client_id = resource$api_client_id,
-                               user_id = resource$user_id, created_by_ip_address = resource$created_by_ip_address,
+                       ApiClientAuthorization$new(uuid = resource$uuid,
+                               etag = resource$etag, api_token = resource$api_token,
+                               api_client_id = resource$api_client_id, user_id = resource$user_id,
+                               created_by_ip_address = resource$created_by_ip_address,
                                last_used_by_ip_address = resource$last_used_by_ip_address,
                                last_used_at = resource$last_used_at, expires_at = resource$expires_at,
                                created_at = resource$created_at, updated_at = resource$updated_at,
@@ -733,8 +709,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClient$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -742,19 +717,18 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at, is_trusted = resource$is_trusted)
                },
 
-               api_clients.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               api_clients.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("api_clients")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -764,8 +738,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       ApiClientList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -787,8 +760,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClient$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -812,8 +784,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClient$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -837,8 +808,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClient$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -846,19 +816,18 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at, is_trusted = resource$is_trusted)
                },
 
-               api_clients.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               api_clients.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("api_clients")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -868,8 +837,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClientList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       ApiClientList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -891,8 +859,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClient$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -916,8 +883,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ApiClient$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       ApiClient$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -941,10 +907,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerRequest$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       ContainerRequest$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_at = resource$modified_at,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                name = resource$name, description = resource$description,
                                properties = resource$properties, state = resource$state,
@@ -963,19 +929,18 @@ Arvados <- R6::R6Class(
                                output_name = resource$output_name, output_ttl = resource$output_ttl)
                },
 
-               container_requests.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               container_requests.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("container_requests")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -985,15 +950,14 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerRequestList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       ContainerRequestList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               container_requests.create = function(
-                               container_request, ensure_unique_name = "false")
+               container_requests.create = function(container_request,
+                       ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("container_requests")
                        url <- paste0(private$host, endPoint)
@@ -1009,10 +973,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerRequest$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       ContainerRequest$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_at = resource$modified_at,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                name = resource$name, description = resource$description,
                                properties = resource$properties, state = resource$state,
@@ -1047,10 +1011,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerRequest$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       ContainerRequest$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_at = resource$modified_at,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                name = resource$name, description = resource$description,
                                properties = resource$properties, state = resource$state,
@@ -1085,10 +1049,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerRequest$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       ContainerRequest$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_at = resource$modified_at,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                name = resource$name, description = resource$description,
                                properties = resource$properties, state = resource$state,
@@ -1107,19 +1071,18 @@ Arvados <- R6::R6Class(
                                output_name = resource$output_name, output_ttl = resource$output_ttl)
                },
 
-               container_requests.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               container_requests.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("container_requests")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -1129,10 +1092,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerRequestList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       ContainerRequestList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -1152,10 +1114,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerRequest$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       ContainerRequest$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_at = resource$modified_at,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                name = resource$name, description = resource$description,
                                properties = resource$properties, state = resource$state,
@@ -1190,10 +1152,10 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerRequest$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       ContainerRequest$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_at = resource$modified_at,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                name = resource$name, description = resource$description,
                                properties = resource$properties, state = resource$state,
@@ -1228,8 +1190,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       AuthorizedKey$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -1238,19 +1199,18 @@ Arvados <- R6::R6Class(
                                created_at = resource$created_at, updated_at = resource$updated_at)
                },
 
-               authorized_keys.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               authorized_keys.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("authorized_keys")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -1260,15 +1220,14 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       AuthorizedKeyList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       AuthorizedKeyList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               authorized_keys.create = function(
-                               authorized_key, ensure_unique_name = "false")
+               authorized_keys.create = function(authorized_key,
+                       ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("authorized_keys")
                        url <- paste0(private$host, endPoint)
@@ -1284,8 +1243,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       AuthorizedKey$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -1310,8 +1268,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       AuthorizedKey$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -1336,8 +1293,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       AuthorizedKey$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -1346,19 +1302,18 @@ Arvados <- R6::R6Class(
                                created_at = resource$created_at, updated_at = resource$updated_at)
                },
 
-               authorized_keys.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               authorized_keys.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("authorized_keys")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -1368,10 +1323,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       AuthorizedKeyList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       AuthorizedKeyList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -1391,8 +1345,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       AuthorizedKey$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -1417,8 +1370,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       AuthorizedKey$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       AuthorizedKey$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -1443,10 +1395,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1462,19 +1413,19 @@ Arvados <- R6::R6Class(
                        collection
                },
 
-               collections.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact", include_trash = NULL)
+               collections.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact", include_trash = NULL)
                {
                        endPoint <- stringr::str_interp("collections")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count, include_trash = include_trash)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count,
+                               include_trash = include_trash)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -1484,10 +1435,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       CollectionList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       CollectionList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -1507,10 +1457,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1542,10 +1491,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1577,10 +1525,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1612,10 +1559,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1647,10 +1593,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1682,10 +1627,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1717,10 +1661,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1736,19 +1679,19 @@ Arvados <- R6::R6Class(
                        collection
                },
 
-               collections.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact", include_trash = NULL)
+               collections.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact", include_trash = NULL)
                {
                        endPoint <- stringr::str_interp("collections")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count, include_trash = include_trash)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count,
+                               include_trash = include_trash)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -1758,10 +1701,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       CollectionList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       CollectionList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -1781,10 +1723,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1816,10 +1757,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       collection <- Collection$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       collection <- Collection$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, portable_data_hash = resource$portable_data_hash,
                                replication_desired = resource$replication_desired,
@@ -1851,8 +1791,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -1868,19 +1807,18 @@ Arvados <- R6::R6Class(
                                scheduling_parameters = resource$scheduling_parameters)
                },
 
-               containers.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               containers.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("containers")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -1890,8 +1828,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       ContainerList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -1913,8 +1850,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -1946,8 +1882,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -1979,8 +1914,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2012,8 +1946,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2045,8 +1978,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2078,8 +2010,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2111,8 +2042,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2128,19 +2058,18 @@ Arvados <- R6::R6Class(
                                scheduling_parameters = resource$scheduling_parameters)
                },
 
-               containers.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               containers.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("containers")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -2150,8 +2079,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       ContainerList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       ContainerList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -2173,8 +2101,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2206,8 +2133,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Container$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Container$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2239,27 +2165,24 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Human$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, properties = resource$properties,
                                created_at = resource$created_at, updated_at = resource$updated_at)
                },
 
-               humans.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               humans.index = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("humans")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -2269,8 +2192,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       HumanList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       HumanList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -2292,8 +2214,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Human$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, properties = resource$properties,
@@ -2316,8 +2237,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Human$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, properties = resource$properties,
@@ -2340,27 +2260,24 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Human$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, properties = resource$properties,
                                created_at = resource$created_at, updated_at = resource$updated_at)
                },
 
-               humans.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               humans.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("humans")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -2370,8 +2287,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       HumanList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       HumanList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -2393,8 +2309,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Human$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, properties = resource$properties,
@@ -2417,8 +2332,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Human$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Human$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, properties = resource$properties,
@@ -2441,8 +2355,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, job_uuid = resource$job_uuid,
@@ -2454,19 +2367,18 @@ Arvados <- R6::R6Class(
                                finished_at = resource$finished_at)
                },
 
-               job_tasks.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               job_tasks.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("job_tasks")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -2476,8 +2388,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTaskList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       JobTaskList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -2499,8 +2410,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, job_uuid = resource$job_uuid,
@@ -2528,8 +2438,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, job_uuid = resource$job_uuid,
@@ -2557,8 +2466,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, job_uuid = resource$job_uuid,
@@ -2570,19 +2478,18 @@ Arvados <- R6::R6Class(
                                finished_at = resource$finished_at)
                },
 
-               job_tasks.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               job_tasks.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("job_tasks")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -2592,8 +2499,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTaskList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       JobTaskList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -2615,8 +2521,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, job_uuid = resource$job_uuid,
@@ -2644,8 +2549,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobTask$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       JobTask$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, job_uuid = resource$job_uuid,
@@ -2673,8 +2577,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Link$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2684,19 +2587,17 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at)
                },
 
-               links.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               links.index = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("links")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -2706,8 +2607,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       LinkList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       LinkList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -2729,8 +2629,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Link$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2756,8 +2655,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Link$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2783,8 +2681,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Link$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2794,19 +2691,17 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at)
                },
 
-               links.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               links.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("links")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -2816,8 +2711,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       LinkList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       LinkList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -2839,8 +2733,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Link$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2866,8 +2759,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Link$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2893,8 +2785,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Link$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Link$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -2920,8 +2811,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -2944,19 +2834,17 @@ Arvados <- R6::R6Class(
                                components = resource$components, script_parameters_digest = resource$script_parameters_digest)
                },
 
-               jobs.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               jobs.index = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("jobs")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -2966,27 +2854,24 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       JobList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               jobs.create = function(
-                               job, ensure_unique_name = "false", find_or_create = "false",
-                               filters = NULL, minimum_script_version = NULL,
-                               exclude_script_versions = NULL)
+               jobs.create = function(job, ensure_unique_name = "false",
+                       find_or_create = "false", filters = NULL,
+                       minimum_script_version = NULL, exclude_script_versions = NULL)
                {
                        endPoint <- stringr::str_interp("jobs")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       ensure_unique_name = ensure_unique_name,
-                                       find_or_create = find_or_create, filters = filters,
-                                       minimum_script_version = minimum_script_version,
-                                       exclude_script_versions = exclude_script_versions)
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name,
+                               find_or_create = find_or_create, filters = filters,
+                               minimum_script_version = minimum_script_version,
+                               exclude_script_versions = exclude_script_versions)
                        body <- job$toJSON()
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
@@ -2996,8 +2881,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -3036,8 +2920,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -3076,8 +2959,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -3100,19 +2982,17 @@ Arvados <- R6::R6Class(
                                components = resource$components, script_parameters_digest = resource$script_parameters_digest)
                },
 
-               jobs.queue = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               jobs.queue = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("jobs/queue")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -3122,8 +3002,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -3162,8 +3041,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -3202,8 +3080,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -3242,8 +3119,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -3266,19 +3142,17 @@ Arvados <- R6::R6Class(
                                components = resource$components, script_parameters_digest = resource$script_parameters_digest)
                },
 
-               jobs.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               jobs.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("jobs")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -3288,8 +3162,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       JobList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       JobList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -3311,8 +3184,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -3351,8 +3223,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Job$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Job$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, submit_id = resource$submit_id,
@@ -3391,8 +3262,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, ping_secret = resource$ping_secret,
@@ -3404,19 +3274,18 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
                },
 
-               keep_disks.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               keep_disks.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("keep_disks")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -3426,8 +3295,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDiskList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       KeepDiskList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -3449,8 +3317,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, ping_secret = resource$ping_secret,
@@ -3478,8 +3345,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, ping_secret = resource$ping_secret,
@@ -3507,8 +3373,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, ping_secret = resource$ping_secret,
@@ -3520,19 +3385,18 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
                },
 
-               keep_disks.ping = function(
-                               uuid = NULL, ping_secret, node_uuid = NULL,
-                               filesystem_uuid = NULL, service_host = NULL,
-                               service_port, service_ssl_flag)
+               keep_disks.ping = function(uuid = NULL, ping_secret,
+                       node_uuid = NULL, filesystem_uuid = NULL,
+                       service_host = NULL, service_port, service_ssl_flag)
                {
                        endPoint <- stringr::str_interp("keep_disks/ping")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       uuid = uuid, ping_secret = ping_secret, node_uuid = node_uuid,
-                                       filesystem_uuid = filesystem_uuid, service_host = service_host,
-                                       service_port = service_port, service_ssl_flag = service_ssl_flag)
+                       queryArgs <- list(uuid = uuid, ping_secret = ping_secret,
+                               node_uuid = node_uuid, filesystem_uuid = filesystem_uuid,
+                               service_host = service_host, service_port = service_port,
+                               service_ssl_flag = service_ssl_flag)
                        body <- NULL
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
@@ -3542,8 +3406,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, ping_secret = resource$ping_secret,
@@ -3555,19 +3418,18 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at, keep_service_uuid = resource$keep_service_uuid)
                },
 
-               keep_disks.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               keep_disks.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("keep_disks")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -3577,8 +3439,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDiskList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       KeepDiskList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -3600,8 +3461,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, ping_secret = resource$ping_secret,
@@ -3629,8 +3489,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepDisk$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepDisk$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, ping_secret = resource$ping_secret,
@@ -3658,8 +3517,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, service_host = resource$service_host,
@@ -3668,19 +3526,18 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at, read_only = resource$read_only)
                },
 
-               keep_services.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               keep_services.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("keep_services")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -3690,15 +3547,14 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepServiceList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       KeepServiceList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               keep_services.create = function(
-                               keep_service, ensure_unique_name = "false")
+               keep_services.create = function(keep_service,
+                       ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("keep_services")
                        url <- paste0(private$host, endPoint)
@@ -3714,8 +3570,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, service_host = resource$service_host,
@@ -3740,8 +3595,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, service_host = resource$service_host,
@@ -3766,8 +3620,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, service_host = resource$service_host,
@@ -3792,8 +3645,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, service_host = resource$service_host,
@@ -3802,19 +3654,18 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at, read_only = resource$read_only)
                },
 
-               keep_services.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               keep_services.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("keep_services")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -3824,10 +3675,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepServiceList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       KeepServiceList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -3847,8 +3697,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, service_host = resource$service_host,
@@ -3873,8 +3722,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       KeepService$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       KeepService$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, service_host = resource$service_host,
@@ -3899,29 +3747,27 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineTemplate$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
                                components = resource$components, updated_at = resource$updated_at,
                                description = resource$description)
                },
 
-               pipeline_templates.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               pipeline_templates.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("pipeline_templates")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -3931,15 +3777,14 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplateList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       PipelineTemplateList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               pipeline_templates.create = function(
-                               pipeline_template, ensure_unique_name = "false")
+               pipeline_templates.create = function(pipeline_template,
+                       ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("pipeline_templates")
                        url <- paste0(private$host, endPoint)
@@ -3955,10 +3800,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineTemplate$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
                                components = resource$components, updated_at = resource$updated_at,
@@ -3981,10 +3825,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineTemplate$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
                                components = resource$components, updated_at = resource$updated_at,
@@ -4007,29 +3850,27 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineTemplate$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
                                components = resource$components, updated_at = resource$updated_at,
                                description = resource$description)
                },
 
-               pipeline_templates.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               pipeline_templates.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("pipeline_templates")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4039,10 +3880,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplateList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       PipelineTemplateList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -4062,10 +3902,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineTemplate$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
                                components = resource$components, updated_at = resource$updated_at,
@@ -4088,10 +3927,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineTemplate$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineTemplate$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
                                components = resource$components, updated_at = resource$updated_at,
@@ -4114,10 +3952,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineInstance$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
                                name = resource$name, components = resource$components,
@@ -4127,19 +3964,18 @@ Arvados <- R6::R6Class(
                                description = resource$description)
                },
 
-               pipeline_instances.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               pipeline_instances.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("pipeline_instances")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4149,15 +3985,14 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstanceList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       PipelineInstanceList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               pipeline_instances.create = function(
-                               pipeline_instance, ensure_unique_name = "false")
+               pipeline_instances.create = function(pipeline_instance,
+                       ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("pipeline_instances")
                        url <- paste0(private$host, endPoint)
@@ -4173,10 +4008,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineInstance$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
                                name = resource$name, components = resource$components,
@@ -4202,10 +4036,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineInstance$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
                                name = resource$name, components = resource$components,
@@ -4231,10 +4064,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineInstance$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
                                name = resource$name, components = resource$components,
@@ -4260,10 +4092,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineInstance$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
                                name = resource$name, components = resource$components,
@@ -4273,19 +4104,18 @@ Arvados <- R6::R6Class(
                                description = resource$description)
                },
 
-               pipeline_instances.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               pipeline_instances.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("pipeline_instances")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4295,10 +4125,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstanceList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       PipelineInstanceList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -4318,10 +4147,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineInstance$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
                                name = resource$name, components = resource$components,
@@ -4347,10 +4175,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       PipelineInstance$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, created_at = resource$created_at,
-                               modified_by_client_uuid = resource$modified_by_client_uuid,
+                       PipelineInstance$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               created_at = resource$created_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, pipeline_template_uuid = resource$pipeline_template_uuid,
                                name = resource$name, components = resource$components,
@@ -4376,8 +4203,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Node$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4389,19 +4215,17 @@ Arvados <- R6::R6Class(
                                job_uuid = resource$job_uuid)
                },
 
-               nodes.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               nodes.index = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("nodes")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4411,23 +4235,21 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       NodeList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       NodeList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               nodes.create = function(
-                               node, ensure_unique_name = "false", assign_slot = NULL)
+               nodes.create = function(node, ensure_unique_name = "false",
+                       assign_slot = NULL)
                {
                        endPoint <- stringr::str_interp("nodes")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       ensure_unique_name = ensure_unique_name,
-                                       assign_slot = assign_slot)
+                       queryArgs <- list(ensure_unique_name = ensure_unique_name,
+                               assign_slot = assign_slot)
                        body <- node$toJSON()
                        
                        response <- private$REST$http$exec("POST", url, headers, body,
@@ -4437,8 +4259,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Node$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4466,8 +4287,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Node$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4495,8 +4315,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Node$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4524,8 +4343,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Node$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4537,19 +4355,17 @@ Arvados <- R6::R6Class(
                                job_uuid = resource$job_uuid)
                },
 
-               nodes.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               nodes.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("nodes")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4559,8 +4375,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       NodeList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       NodeList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -4582,8 +4397,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Node$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4611,8 +4425,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Node$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Node$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4640,27 +4453,25 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Repository$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
                                created_at = resource$created_at, updated_at = resource$updated_at)
                },
 
-               repositories.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               repositories.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("repositories")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4670,10 +4481,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       RepositoryList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       RepositoryList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -4693,8 +4503,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Repository$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -4717,8 +4526,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Repository$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -4741,8 +4549,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Repository$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -4765,27 +4572,25 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Repository$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
                                created_at = resource$created_at, updated_at = resource$updated_at)
                },
 
-               repositories.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               repositories.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("repositories")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4795,10 +4600,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       RepositoryList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       RepositoryList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -4818,8 +4622,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Repository$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -4842,8 +4645,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Repository$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Repository$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -4866,8 +4668,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4875,19 +4676,18 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at, properties = resource$properties)
                },
 
-               specimens.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               specimens.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("specimens")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -4897,8 +4697,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       SpecimenList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       SpecimenList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -4920,8 +4719,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4945,8 +4743,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4970,8 +4767,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -4979,19 +4775,18 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at, properties = resource$properties)
                },
 
-               specimens.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               specimens.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("specimens")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5001,8 +4796,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       SpecimenList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       SpecimenList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -5024,8 +4818,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -5049,8 +4842,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Specimen$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Specimen$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -5074,8 +4866,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Log$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                object_uuid = resource$object_uuid, event_at = resource$event_at,
@@ -5085,19 +4876,17 @@ Arvados <- R6::R6Class(
                                object_owner_uuid = resource$object_owner_uuid)
                },
 
-               logs.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               logs.index = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("logs")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5107,8 +4896,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       LogList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       LogList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -5130,8 +4918,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Log$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                object_uuid = resource$object_uuid, event_at = resource$event_at,
@@ -5157,8 +4944,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Log$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                object_uuid = resource$object_uuid, event_at = resource$event_at,
@@ -5184,8 +4970,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Log$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                object_uuid = resource$object_uuid, event_at = resource$event_at,
@@ -5195,19 +4980,17 @@ Arvados <- R6::R6Class(
                                object_owner_uuid = resource$object_owner_uuid)
                },
 
-               logs.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               logs.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("logs")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5217,8 +5000,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       LogList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       LogList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -5240,8 +5022,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Log$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                object_uuid = resource$object_uuid, event_at = resource$event_at,
@@ -5267,8 +5048,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Log$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Log$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                object_uuid = resource$object_uuid, event_at = resource$event_at,
@@ -5294,8 +5074,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Trait$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -5303,19 +5082,17 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at)
                },
 
-               traits.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               traits.index = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("traits")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5325,8 +5102,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       TraitList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       TraitList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -5348,8 +5124,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Trait$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -5373,8 +5148,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Trait$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -5398,8 +5172,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Trait$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -5407,19 +5180,17 @@ Arvados <- R6::R6Class(
                                updated_at = resource$updated_at)
                },
 
-               traits.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               traits.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact")
                {
                        endPoint <- stringr::str_interp("traits")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5429,8 +5200,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       TraitList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       TraitList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -5452,8 +5222,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Trait$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -5477,8 +5246,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Trait$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Trait$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, name = resource$name,
@@ -5502,27 +5270,26 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       VirtualMachine$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, hostname = resource$hostname,
                                created_at = resource$created_at, updated_at = resource$updated_at)
                },
 
-               virtual_machines.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               virtual_machines.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("virtual_machines")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5532,15 +5299,14 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachineList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       VirtualMachineList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               virtual_machines.create = function(
-                               virtual_machine, ensure_unique_name = "false")
+               virtual_machines.create = function(virtual_machine,
+                       ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("virtual_machines")
                        url <- paste0(private$host, endPoint)
@@ -5556,9 +5322,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       VirtualMachine$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, hostname = resource$hostname,
                                created_at = resource$created_at, updated_at = resource$updated_at)
@@ -5580,9 +5346,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       VirtualMachine$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, hostname = resource$hostname,
                                created_at = resource$created_at, updated_at = resource$updated_at)
@@ -5604,9 +5370,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       VirtualMachine$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, hostname = resource$hostname,
                                created_at = resource$created_at, updated_at = resource$updated_at)
@@ -5628,9 +5394,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       VirtualMachine$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, hostname = resource$hostname,
                                created_at = resource$created_at, updated_at = resource$updated_at)
@@ -5652,27 +5418,26 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       VirtualMachine$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, hostname = resource$hostname,
                                created_at = resource$created_at, updated_at = resource$updated_at)
                },
 
-               virtual_machines.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               virtual_machines.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("virtual_machines")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5682,10 +5447,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachineList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       VirtualMachineList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -5705,9 +5469,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       VirtualMachine$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, hostname = resource$hostname,
                                created_at = resource$created_at, updated_at = resource$updated_at)
@@ -5729,9 +5493,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       VirtualMachine$new(
-                               uuid = resource$uuid, etag = resource$etag,
-                               owner_uuid = resource$owner_uuid, modified_by_client_uuid = resource$modified_by_client_uuid,
+                       VirtualMachine$new(uuid = resource$uuid,
+                               etag = resource$etag, owner_uuid = resource$owner_uuid,
+                               modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
                                modified_at = resource$modified_at, hostname = resource$hostname,
                                created_at = resource$created_at, updated_at = resource$updated_at)
@@ -5753,8 +5517,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -5762,19 +5525,18 @@ Arvados <- R6::R6Class(
                                definition = resource$definition, updated_at = resource$updated_at)
                },
 
-               workflows.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               workflows.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("workflows")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5784,8 +5546,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       WorkflowList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       WorkflowList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -5807,8 +5568,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -5832,8 +5592,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -5857,8 +5616,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -5866,19 +5624,18 @@ Arvados <- R6::R6Class(
                                definition = resource$definition, updated_at = resource$updated_at)
                },
 
-               workflows.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               workflows.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("workflows")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5888,8 +5645,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       WorkflowList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       WorkflowList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -5911,8 +5667,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -5936,8 +5691,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Workflow$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Workflow$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_at = resource$modified_at, modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -5961,8 +5715,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Group$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -5972,19 +5725,19 @@ Arvados <- R6::R6Class(
                                is_trashed = resource$is_trashed, delete_at = resource$delete_at)
                },
 
-               groups.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact", include_trash = NULL)
+               groups.index = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact",
+                       include_trash = NULL)
                {
                        endPoint <- stringr::str_interp("groups")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count, include_trash = include_trash)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count,
+                               include_trash = include_trash)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -5994,8 +5747,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       GroupList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       GroupList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -6017,8 +5769,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Group$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6044,8 +5795,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Group$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6071,8 +5821,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Group$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6082,21 +5831,19 @@ Arvados <- R6::R6Class(
                                is_trashed = resource$is_trashed, delete_at = resource$delete_at)
                },
 
-               groups.contents = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               distinct = NULL, limit = "100", offset = "0",
-                               count = "exact", include_trash = NULL, uuid = NULL,
-                               recursive = NULL)
+               groups.contents = function(filters = NULL,
+                       where = NULL, order = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact",
+                       include_trash = NULL, uuid = NULL, recursive = NULL)
                {
                        endPoint <- stringr::str_interp("groups/contents")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       distinct = distinct, limit = limit, offset = offset,
-                                       count = count, include_trash = include_trash,
-                                       uuid = uuid, recursive = recursive)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, distinct = distinct, limit = limit,
+                               offset = offset, count = count, include_trash = include_trash,
+                               uuid = uuid, recursive = recursive)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6106,8 +5853,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Group$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6133,8 +5879,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Group$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6160,8 +5905,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Group$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6171,19 +5915,19 @@ Arvados <- R6::R6Class(
                                is_trashed = resource$is_trashed, delete_at = resource$delete_at)
                },
 
-               groups.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact", include_trash = NULL)
+               groups.list = function(filters = NULL, where = NULL,
+                       order = NULL, select = NULL, distinct = NULL,
+                       limit = "100", offset = "0", count = "exact",
+                       include_trash = NULL)
                {
                        endPoint <- stringr::str_interp("groups")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count, include_trash = include_trash)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count,
+                               include_trash = include_trash)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6193,8 +5937,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       GroupList$new(
-                               kind = resource$kind, etag = resource$etag,
+                       GroupList$new(kind = resource$kind, etag = resource$etag,
                                items = resource$items, next_link = resource$next_link,
                                next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
@@ -6216,8 +5959,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Group$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6243,8 +5985,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       Group$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       Group$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6270,8 +6011,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6286,19 +6026,18 @@ Arvados <- R6::R6Class(
                                is_trashed = resource$is_trashed)
                },
 
-               user_agreements.index = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               user_agreements.index = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("user_agreements")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6308,15 +6047,14 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreementList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       UserAgreementList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
-               user_agreements.create = function(
-                               user_agreement, ensure_unique_name = "false")
+               user_agreements.create = function(user_agreement,
+                       ensure_unique_name = "false")
                {
                        endPoint <- stringr::str_interp("user_agreements")
                        url <- paste0(private$host, endPoint)
@@ -6332,8 +6070,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6364,8 +6101,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6396,8 +6132,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6428,8 +6163,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6460,8 +6194,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6476,19 +6209,18 @@ Arvados <- R6::R6Class(
                                is_trashed = resource$is_trashed)
                },
 
-               user_agreements.list = function(
-                               filters = NULL, where = NULL, order = NULL,
-                               select = NULL, distinct = NULL, limit = "100",
-                               offset = "0", count = "exact")
+               user_agreements.list = function(filters = NULL,
+                       where = NULL, order = NULL, select = NULL,
+                       distinct = NULL, limit = "100", offset = "0",
+                       count = "exact")
                {
                        endPoint <- stringr::str_interp("user_agreements")
                        url <- paste0(private$host, endPoint)
                        headers <- list(Authorization = paste("OAuth2", private$token), 
                                        "Content-Type" = "application/json")
-                       queryArgs <- list(
-                                       filters = filters, where = where, order = order,
-                                       select = select, distinct = distinct, limit = limit,
-                                       offset = offset, count = count)
+                       queryArgs <- list(filters = filters, where = where,
+                               order = order, select = select, distinct = distinct,
+                               limit = limit, offset = offset, count = count)
                        body <- NULL
                        
                        response <- private$REST$http$exec("GET", url, headers, body,
@@ -6498,10 +6230,9 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreementList$new(
-                               kind = resource$kind, etag = resource$etag,
-                               items = resource$items, next_link = resource$next_link,
-                               next_page_token = resource$next_page_token,
+                       UserAgreementList$new(kind = resource$kind,
+                               etag = resource$etag, items = resource$items,
+                               next_link = resource$next_link, next_page_token = resource$next_page_token,
                                selfLink = resource$selfLink)
                },
 
@@ -6521,8 +6252,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6553,8 +6283,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
@@ -6585,8 +6314,7 @@ Arvados <- R6::R6Class(
                        if(!is.null(resource$errors))
                                stop(resource$errors)
                        
-                       UserAgreement$new(
-                               uuid = resource$uuid, etag = resource$etag,
+                       UserAgreement$new(uuid = resource$uuid, etag = resource$etag,
                                owner_uuid = resource$owner_uuid, created_at = resource$created_at,
                                modified_by_client_uuid = resource$modified_by_client_uuid,
                                modified_by_user_uuid = resource$modified_by_user_uuid,
index e97b6d3419c699b439769496858a340cd222e725..132428227dd159cd8fc94d2006ecfb759803c4f3 100644 (file)
@@ -1,3 +1,26 @@
+#' UserList
+#' 
+#' User list
+#' 
+#' @section Usage:
+#' \preformatted{userList -> UserList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#userList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Users.}
+#'     \item{next_link}{A link to the next page of Users.}
+#'     \item{next_page_token}{The page token for the next page of Users.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name UserList
+NULL
+
 #' @export
 UserList <- R6::R6Class(
 
@@ -11,9 +34,9 @@ UserList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -22,10 +45,8 @@ UserList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -46,6 +67,44 @@ UserList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' User
+#' 
+#' User
+#' 
+#' @section Usage:
+#' \preformatted{user -> User$new(uuid = NULL, etag = NULL,
+#'     owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, email = NULL,
+#'     first_name = NULL, last_name = NULL, identity_url = NULL,
+#'     is_admin = NULL, prefs = NULL, updated_at = NULL, default_owner_uuid = NULL,
+#'     is_active = NULL, username = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{email}{}
+#'     \item{first_name}{}
+#'     \item{last_name}{}
+#'     \item{identity_url}{}
+#'     \item{is_admin}{}
+#'     \item{prefs}{}
+#'     \item{updated_at}{}
+#'     \item{default_owner_uuid}{}
+#'     \item{is_active}{}
+#'     \item{username}{}
+#'   }
+#' 
+#' @name User
+NULL
+
 #' @export
 User <- R6::R6Class(
 
@@ -70,9 +129,8 @@ User <- R6::R6Class(
                is_active = NULL,
                username = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_by_client_uuid = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
                                modified_by_user_uuid = NULL, modified_at = NULL,
                                email = NULL, first_name = NULL, last_name = NULL,
                                identity_url = NULL, is_admin = NULL, prefs = NULL,
@@ -97,13 +155,11 @@ User <- R6::R6Class(
                        self$is_active <- is_active
                        self$username <- username
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, email,
-                               first_name, last_name, identity_url, is_admin,
-                               prefs, updated_at, default_owner_uuid, is_active,
-                               username
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, email, first_name, last_name,
+                               identity_url, is_admin, prefs, updated_at,
+                               default_owner_uuid, is_active, username)
                },
 
                toJSON = function() {
@@ -124,6 +180,29 @@ User <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' ApiClientAuthorizationList
+#' 
+#' ApiClientAuthorization list
+#' 
+#' @section Usage:
+#' \preformatted{apiClientAuthorizationList -> ApiClientAuthorizationList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#apiClientAuthorizationList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of ApiClientAuthorizations.}
+#'     \item{next_link}{A link to the next page of ApiClientAuthorizations.}
+#'     \item{next_page_token}{The page token for the next page of ApiClientAuthorizations.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name ApiClientAuthorizationList
+NULL
+
 #' @export
 ApiClientAuthorizationList <- R6::R6Class(
 
@@ -137,9 +216,9 @@ ApiClientAuthorizationList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -148,10 +227,8 @@ ApiClientAuthorizationList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -172,6 +249,39 @@ ApiClientAuthorizationList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' ApiClientAuthorization
+#' 
+#' ApiClientAuthorization
+#' 
+#' @section Usage:
+#' \preformatted{apiClientAuthorization -> ApiClientAuthorization$new(uuid = NULL,
+#'     etag = NULL, api_token = NULL, api_client_id = NULL,
+#'     user_id = NULL, created_by_ip_address = NULL, last_used_by_ip_address = NULL,
+#'     last_used_at = NULL, expires_at = NULL, created_at = NULL,
+#'     updated_at = NULL, default_owner_uuid = NULL, scopes = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{api_token}{}
+#'     \item{api_client_id}{}
+#'     \item{user_id}{}
+#'     \item{created_by_ip_address}{}
+#'     \item{last_used_by_ip_address}{}
+#'     \item{last_used_at}{}
+#'     \item{expires_at}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'     \item{default_owner_uuid}{}
+#'     \item{scopes}{}
+#'     \item{uuid}{}
+#'   }
+#' 
+#' @name ApiClientAuthorization
+NULL
+
 #' @export
 ApiClientAuthorization <- R6::R6Class(
 
@@ -192,12 +302,12 @@ ApiClientAuthorization <- R6::R6Class(
                default_owner_uuid = NULL,
                scopes = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, api_token = NULL,
-                               api_client_id = NULL, user_id = NULL, created_by_ip_address = NULL,
-                               last_used_by_ip_address = NULL, last_used_at = NULL,
-                               expires_at = NULL, created_at = NULL, updated_at = NULL,
-                               default_owner_uuid = NULL, scopes = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               api_token = NULL, api_client_id = NULL, user_id = NULL,
+                               created_by_ip_address = NULL, last_used_by_ip_address = NULL,
+                               last_used_at = NULL, expires_at = NULL, created_at = NULL,
+                               updated_at = NULL, default_owner_uuid = NULL,
+                               scopes = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -213,12 +323,11 @@ ApiClientAuthorization <- R6::R6Class(
                        self$default_owner_uuid <- default_owner_uuid
                        self$scopes <- scopes
                        
-                       private$classFields <- c(
-                               uuid, etag, api_token, api_client_id, user_id,
-                               created_by_ip_address, last_used_by_ip_address,
-                               last_used_at, expires_at, created_at, updated_at,
-                               default_owner_uuid, scopes
-                       )
+                       private$classFields <- c(uuid, etag, api_token,
+                               api_client_id, user_id, created_by_ip_address,
+                               last_used_by_ip_address, last_used_at, expires_at,
+                               created_at, updated_at, default_owner_uuid,
+                               scopes)
                },
 
                toJSON = function() {
@@ -239,6 +348,29 @@ ApiClientAuthorization <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' ApiClientList
+#' 
+#' ApiClient list
+#' 
+#' @section Usage:
+#' \preformatted{apiClientList -> ApiClientList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#apiClientList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of ApiClients.}
+#'     \item{next_link}{A link to the next page of ApiClients.}
+#'     \item{next_page_token}{The page token for the next page of ApiClients.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name ApiClientList
+NULL
+
 #' @export
 ApiClientList <- R6::R6Class(
 
@@ -252,9 +384,9 @@ ApiClientList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -263,10 +395,8 @@ ApiClientList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -287,6 +417,37 @@ ApiClientList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' ApiClient
+#' 
+#' ApiClient
+#' 
+#' @section Usage:
+#' \preformatted{apiClient -> ApiClient$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+#'     url_prefix = NULL, created_at = NULL, updated_at = NULL,
+#'     is_trusted = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{name}{}
+#'     \item{url_prefix}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'     \item{is_trusted}{}
+#'   }
+#' 
+#' @name ApiClient
+NULL
+
 #' @export
 ApiClient <- R6::R6Class(
 
@@ -305,11 +466,11 @@ ApiClient <- R6::R6Class(
                updated_at = NULL,
                is_trusted = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, name = NULL, url_prefix = NULL,
-                               created_at = NULL, updated_at = NULL, is_trusted = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               name = NULL, url_prefix = NULL, created_at = NULL,
+                               updated_at = NULL, is_trusted = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -323,11 +484,10 @@ ApiClient <- R6::R6Class(
                        self$updated_at <- updated_at
                        self$is_trusted <- is_trusted
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, name,
-                               url_prefix, created_at, updated_at, is_trusted
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, name, url_prefix, created_at,
+                               updated_at, is_trusted)
                },
 
                toJSON = function() {
@@ -348,6 +508,29 @@ ApiClient <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' ContainerRequestList
+#' 
+#' ContainerRequest list
+#' 
+#' @section Usage:
+#' \preformatted{containerRequestList -> ContainerRequestList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#containerRequestList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of ContainerRequests.}
+#'     \item{next_link}{A link to the next page of ContainerRequests.}
+#'     \item{next_page_token}{The page token for the next page of ContainerRequests.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name ContainerRequestList
+NULL
+
 #' @export
 ContainerRequestList <- R6::R6Class(
 
@@ -361,9 +544,9 @@ ContainerRequestList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -372,10 +555,8 @@ ContainerRequestList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -396,6 +577,65 @@ ContainerRequestList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' ContainerRequest
+#' 
+#' ContainerRequest
+#' 
+#' @section Usage:
+#' \preformatted{containerRequest -> ContainerRequest$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, created_at = NULL,
+#'     modified_at = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, name = NULL, description = NULL,
+#'     properties = NULL, state = NULL, requesting_container_uuid = NULL,
+#'     container_uuid = NULL, container_count_max = NULL,
+#'     mounts = NULL, runtime_constraints = NULL, container_image = NULL,
+#'     environment = NULL, cwd = NULL, command = NULL, output_path = NULL,
+#'     priority = NULL, expires_at = NULL, filters = NULL,
+#'     updated_at = NULL, container_count = NULL, use_existing = NULL,
+#'     scheduling_parameters = NULL, output_uuid = NULL, log_uuid = NULL,
+#'     output_name = NULL, output_ttl = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{name}{}
+#'     \item{description}{}
+#'     \item{properties}{}
+#'     \item{state}{}
+#'     \item{requesting_container_uuid}{}
+#'     \item{container_uuid}{}
+#'     \item{container_count_max}{}
+#'     \item{mounts}{}
+#'     \item{runtime_constraints}{}
+#'     \item{container_image}{}
+#'     \item{environment}{}
+#'     \item{cwd}{}
+#'     \item{command}{}
+#'     \item{output_path}{}
+#'     \item{priority}{}
+#'     \item{expires_at}{}
+#'     \item{filters}{}
+#'     \item{updated_at}{}
+#'     \item{container_count}{}
+#'     \item{use_existing}{}
+#'     \item{scheduling_parameters}{}
+#'     \item{output_uuid}{}
+#'     \item{log_uuid}{}
+#'     \item{output_name}{}
+#'     \item{output_ttl}{}
+#'   }
+#' 
+#' @name ContainerRequest
+NULL
+
 #' @export
 ContainerRequest <- R6::R6Class(
 
@@ -435,17 +675,17 @@ ContainerRequest <- R6::R6Class(
                output_name = NULL,
                output_ttl = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_at = NULL, modified_by_client_uuid = NULL,
-                               modified_by_user_uuid = NULL, name = NULL,
-                               description = NULL, properties = NULL, state = NULL,
-                               requesting_container_uuid = NULL, container_uuid = NULL,
-                               container_count_max = NULL, mounts = NULL,
-                               runtime_constraints = NULL, container_image = NULL,
-                               environment = NULL, cwd = NULL, command = NULL,
-                               output_path = NULL, priority = NULL, expires_at = NULL,
-                               filters = NULL, updated_at = NULL, container_count = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_at = NULL,
+                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+                               name = NULL, description = NULL, properties = NULL,
+                               state = NULL, requesting_container_uuid = NULL,
+                               container_uuid = NULL, container_count_max = NULL,
+                               mounts = NULL, runtime_constraints = NULL,
+                               container_image = NULL, environment = NULL,
+                               cwd = NULL, command = NULL, output_path = NULL,
+                               priority = NULL, expires_at = NULL, filters = NULL,
+                               updated_at = NULL, container_count = NULL,
                                use_existing = NULL, scheduling_parameters = NULL,
                                output_uuid = NULL, log_uuid = NULL, output_name = NULL,
                                output_ttl = NULL)
@@ -483,17 +723,16 @@ ContainerRequest <- R6::R6Class(
                        self$output_name <- output_name
                        self$output_ttl <- output_ttl
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_at,
-                               modified_by_client_uuid, modified_by_user_uuid,
-                               name, description, properties, state, requesting_container_uuid,
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_at, modified_by_client_uuid,
+                               modified_by_user_uuid, name, description,
+                               properties, state, requesting_container_uuid,
                                container_uuid, container_count_max, mounts,
                                runtime_constraints, container_image, environment,
                                cwd, command, output_path, priority, expires_at,
                                filters, updated_at, container_count, use_existing,
                                scheduling_parameters, output_uuid, log_uuid,
-                               output_name, output_ttl
-                       )
+                               output_name, output_ttl)
                },
 
                toJSON = function() {
@@ -514,6 +753,29 @@ ContainerRequest <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' AuthorizedKeyList
+#' 
+#' AuthorizedKey list
+#' 
+#' @section Usage:
+#' \preformatted{authorizedKeyList -> AuthorizedKeyList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#authorizedKeyList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of AuthorizedKeys.}
+#'     \item{next_link}{A link to the next page of AuthorizedKeys.}
+#'     \item{next_page_token}{The page token for the next page of AuthorizedKeys.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name AuthorizedKeyList
+NULL
+
 #' @export
 AuthorizedKeyList <- R6::R6Class(
 
@@ -527,9 +789,9 @@ AuthorizedKeyList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -538,10 +800,8 @@ AuthorizedKeyList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -562,6 +822,39 @@ AuthorizedKeyList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' AuthorizedKey
+#' 
+#' AuthorizedKey
+#' 
+#' @section Usage:
+#' \preformatted{authorizedKey -> AuthorizedKey$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+#'     key_type = NULL, authorized_user_uuid = NULL, public_key = NULL,
+#'     expires_at = NULL, created_at = NULL, updated_at = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{name}{}
+#'     \item{key_type}{}
+#'     \item{authorized_user_uuid}{}
+#'     \item{public_key}{}
+#'     \item{expires_at}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'   }
+#' 
+#' @name AuthorizedKey
+NULL
+
 #' @export
 AuthorizedKey <- R6::R6Class(
 
@@ -582,12 +875,12 @@ AuthorizedKey <- R6::R6Class(
                created_at = NULL,
                updated_at = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, name = NULL, key_type = NULL,
-                               authorized_user_uuid = NULL, public_key = NULL,
-                               expires_at = NULL, created_at = NULL, updated_at = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               name = NULL, key_type = NULL, authorized_user_uuid = NULL,
+                               public_key = NULL, expires_at = NULL, created_at = NULL,
+                               updated_at = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -603,12 +896,10 @@ AuthorizedKey <- R6::R6Class(
                        self$created_at <- created_at
                        self$updated_at <- updated_at
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, name,
-                               key_type, authorized_user_uuid, public_key,
-                               expires_at, created_at, updated_at
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, name, key_type, authorized_user_uuid,
+                               public_key, expires_at, created_at, updated_at)
                },
 
                toJSON = function() {
@@ -629,6 +920,29 @@ AuthorizedKey <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' CollectionList
+#' 
+#' Collection list
+#' 
+#' @section Usage:
+#' \preformatted{collectionList -> CollectionList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#collectionList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Collections.}
+#'     \item{next_link}{A link to the next page of Collections.}
+#'     \item{next_page_token}{The page token for the next page of Collections.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name CollectionList
+NULL
+
 #' @export
 CollectionList <- R6::R6Class(
 
@@ -642,9 +956,9 @@ CollectionList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -653,10 +967,8 @@ CollectionList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -677,6 +989,29 @@ CollectionList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' ContainerList
+#' 
+#' Container list
+#' 
+#' @section Usage:
+#' \preformatted{containerList -> ContainerList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#containerList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Containers.}
+#'     \item{next_link}{A link to the next page of Containers.}
+#'     \item{next_page_token}{The page token for the next page of Containers.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name ContainerList
+NULL
+
 #' @export
 ContainerList <- R6::R6Class(
 
@@ -690,9 +1025,9 @@ ContainerList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -701,10 +1036,8 @@ ContainerList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -725,6 +1058,57 @@ ContainerList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Container
+#' 
+#' Container
+#' 
+#' @section Usage:
+#' \preformatted{container -> Container$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, created_at = NULL,
+#'     modified_at = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, state = NULL, started_at = NULL,
+#'     finished_at = NULL, log = NULL, environment = NULL,
+#'     cwd = NULL, command = NULL, output_path = NULL, mounts = NULL,
+#'     runtime_constraints = NULL, output = NULL, container_image = NULL,
+#'     progress = NULL, priority = NULL, updated_at = NULL,
+#'     exit_code = NULL, auth_uuid = NULL, locked_by_uuid = NULL,
+#'     scheduling_parameters = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{state}{}
+#'     \item{started_at}{}
+#'     \item{finished_at}{}
+#'     \item{log}{}
+#'     \item{environment}{}
+#'     \item{cwd}{}
+#'     \item{command}{}
+#'     \item{output_path}{}
+#'     \item{mounts}{}
+#'     \item{runtime_constraints}{}
+#'     \item{output}{}
+#'     \item{container_image}{}
+#'     \item{progress}{}
+#'     \item{priority}{}
+#'     \item{updated_at}{}
+#'     \item{exit_code}{}
+#'     \item{auth_uuid}{}
+#'     \item{locked_by_uuid}{}
+#'     \item{scheduling_parameters}{}
+#'   }
+#' 
+#' @name Container
+NULL
+
 #' @export
 Container <- R6::R6Class(
 
@@ -758,14 +1142,14 @@ Container <- R6::R6Class(
                locked_by_uuid = NULL,
                scheduling_parameters = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_at = NULL, modified_by_client_uuid = NULL,
-                               modified_by_user_uuid = NULL, state = NULL,
-                               started_at = NULL, finished_at = NULL, log = NULL,
-                               environment = NULL, cwd = NULL, command = NULL,
-                               output_path = NULL, mounts = NULL, runtime_constraints = NULL,
-                               output = NULL, container_image = NULL, progress = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_at = NULL,
+                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+                               state = NULL, started_at = NULL, finished_at = NULL,
+                               log = NULL, environment = NULL, cwd = NULL,
+                               command = NULL, output_path = NULL, mounts = NULL,
+                               runtime_constraints = NULL, output = NULL,
+                               container_image = NULL, progress = NULL,
                                priority = NULL, updated_at = NULL, exit_code = NULL,
                                auth_uuid = NULL, locked_by_uuid = NULL,
                                scheduling_parameters = NULL)
@@ -797,15 +1181,14 @@ Container <- R6::R6Class(
                        self$locked_by_uuid <- locked_by_uuid
                        self$scheduling_parameters <- scheduling_parameters
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_at,
-                               modified_by_client_uuid, modified_by_user_uuid,
-                               state, started_at, finished_at, log, environment,
-                               cwd, command, output_path, mounts, runtime_constraints,
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_at, modified_by_client_uuid,
+                               modified_by_user_uuid, state, started_at,
+                               finished_at, log, environment, cwd, command,
+                               output_path, mounts, runtime_constraints,
                                output, container_image, progress, priority,
                                updated_at, exit_code, auth_uuid, locked_by_uuid,
-                               scheduling_parameters
-                       )
+                               scheduling_parameters)
                },
 
                toJSON = function() {
@@ -826,6 +1209,29 @@ Container <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' HumanList
+#' 
+#' Human list
+#' 
+#' @section Usage:
+#' \preformatted{humanList -> HumanList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#humanList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Humans.}
+#'     \item{next_link}{A link to the next page of Humans.}
+#'     \item{next_page_token}{The page token for the next page of Humans.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name HumanList
+NULL
+
 #' @export
 HumanList <- R6::R6Class(
 
@@ -839,9 +1245,9 @@ HumanList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -850,10 +1256,8 @@ HumanList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -874,6 +1278,34 @@ HumanList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Human
+#' 
+#' Human
+#' 
+#' @section Usage:
+#' \preformatted{human -> Human$new(uuid = NULL, etag = NULL,
+#'     owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, properties = NULL,
+#'     created_at = NULL, updated_at = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{properties}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'   }
+#' 
+#' @name Human
+NULL
+
 #' @export
 Human <- R6::R6Class(
 
@@ -890,11 +1322,10 @@ Human <- R6::R6Class(
                created_at = NULL,
                updated_at = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, properties = NULL, created_at = NULL,
-                               updated_at = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               properties = NULL, created_at = NULL, updated_at = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -906,11 +1337,9 @@ Human <- R6::R6Class(
                        self$created_at <- created_at
                        self$updated_at <- updated_at
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, properties,
-                               created_at, updated_at
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, properties, created_at, updated_at)
                },
 
                toJSON = function() {
@@ -931,6 +1360,29 @@ Human <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' JobTaskList
+#' 
+#' JobTask list
+#' 
+#' @section Usage:
+#' \preformatted{jobTaskList -> JobTaskList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#jobTaskList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of JobTasks.}
+#'     \item{next_link}{A link to the next page of JobTasks.}
+#'     \item{next_page_token}{The page token for the next page of JobTasks.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name JobTaskList
+NULL
+
 #' @export
 JobTaskList <- R6::R6Class(
 
@@ -944,9 +1396,9 @@ JobTaskList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -955,10 +1407,8 @@ JobTaskList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -979,6 +1429,46 @@ JobTaskList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' JobTask
+#' 
+#' JobTask
+#' 
+#' @section Usage:
+#' \preformatted{jobTask -> JobTask$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, job_uuid = NULL,
+#'     sequence = NULL, parameters = NULL, output = NULL,
+#'     progress = NULL, success = NULL, created_at = NULL,
+#'     updated_at = NULL, created_by_job_task_uuid = NULL,
+#'     qsequence = NULL, started_at = NULL, finished_at = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{job_uuid}{}
+#'     \item{sequence}{}
+#'     \item{parameters}{}
+#'     \item{output}{}
+#'     \item{progress}{}
+#'     \item{success}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'     \item{created_by_job_task_uuid}{}
+#'     \item{qsequence}{}
+#'     \item{started_at}{}
+#'     \item{finished_at}{}
+#'   }
+#' 
+#' @name JobTask
+NULL
+
 #' @export
 JobTask <- R6::R6Class(
 
@@ -1004,14 +1494,13 @@ JobTask <- R6::R6Class(
                started_at = NULL,
                finished_at = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, job_uuid = NULL, sequence = NULL,
-                               parameters = NULL, output = NULL, progress = NULL,
-                               success = NULL, created_at = NULL, updated_at = NULL,
-                               created_by_job_task_uuid = NULL, qsequence = NULL,
-                               started_at = NULL, finished_at = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               job_uuid = NULL, sequence = NULL, parameters = NULL,
+                               output = NULL, progress = NULL, success = NULL,
+                               created_at = NULL, updated_at = NULL, created_by_job_task_uuid = NULL,
+                               qsequence = NULL, started_at = NULL, finished_at = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -1032,13 +1521,12 @@ JobTask <- R6::R6Class(
                        self$started_at <- started_at
                        self$finished_at <- finished_at
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, job_uuid,
-                               sequence, parameters, output, progress, success,
-                               created_at, updated_at, created_by_job_task_uuid,
-                               qsequence, started_at, finished_at
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, job_uuid, sequence, parameters,
+                               output, progress, success, created_at, updated_at,
+                               created_by_job_task_uuid, qsequence, started_at,
+                               finished_at)
                },
 
                toJSON = function() {
@@ -1059,6 +1547,29 @@ JobTask <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' LinkList
+#' 
+#' Link list
+#' 
+#' @section Usage:
+#' \preformatted{linkList -> LinkList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#linkList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Links.}
+#'     \item{next_link}{A link to the next page of Links.}
+#'     \item{next_page_token}{The page token for the next page of Links.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name LinkList
+NULL
+
 #' @export
 LinkList <- R6::R6Class(
 
@@ -1072,9 +1583,9 @@ LinkList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -1083,10 +1594,8 @@ LinkList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -1107,6 +1616,39 @@ LinkList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Link
+#' 
+#' Link
+#' 
+#' @section Usage:
+#' \preformatted{link -> Link$new(uuid = NULL, etag = NULL,
+#'     owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, tail_uuid = NULL,
+#'     link_class = NULL, name = NULL, head_uuid = NULL, properties = NULL,
+#'     updated_at = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{tail_uuid}{}
+#'     \item{link_class}{}
+#'     \item{name}{}
+#'     \item{head_uuid}{}
+#'     \item{properties}{}
+#'     \item{updated_at}{}
+#'   }
+#' 
+#' @name Link
+NULL
+
 #' @export
 Link <- R6::R6Class(
 
@@ -1127,9 +1669,8 @@ Link <- R6::R6Class(
                properties = NULL,
                updated_at = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_by_client_uuid = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
                                modified_by_user_uuid = NULL, modified_at = NULL,
                                tail_uuid = NULL, link_class = NULL, name = NULL,
                                head_uuid = NULL, properties = NULL, updated_at = NULL)
@@ -1148,12 +1689,10 @@ Link <- R6::R6Class(
                        self$properties <- properties
                        self$updated_at <- updated_at
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, tail_uuid,
-                               link_class, name, head_uuid, properties,
-                               updated_at
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, tail_uuid, link_class, name,
+                               head_uuid, properties, updated_at)
                },
 
                toJSON = function() {
@@ -1174,6 +1713,29 @@ Link <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' JobList
+#' 
+#' Job list
+#' 
+#' @section Usage:
+#' \preformatted{jobList -> JobList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#jobList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Jobs.}
+#'     \item{next_link}{A link to the next page of Jobs.}
+#'     \item{next_page_token}{The page token for the next page of Jobs.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name JobList
+NULL
+
 #' @export
 JobList <- R6::R6Class(
 
@@ -1187,9 +1749,9 @@ JobList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -1198,10 +1760,8 @@ JobList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -1222,6 +1782,68 @@ JobList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Job
+#' 
+#' Job
+#' 
+#' @section Usage:
+#' \preformatted{job -> Job$new(uuid = NULL, etag = NULL,
+#'     owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, submit_id = NULL,
+#'     script = NULL, script_version = NULL, script_parameters = NULL,
+#'     cancelled_by_client_uuid = NULL, cancelled_by_user_uuid = NULL,
+#'     cancelled_at = NULL, started_at = NULL, finished_at = NULL,
+#'     running = NULL, success = NULL, output = NULL, created_at = NULL,
+#'     updated_at = NULL, is_locked_by_uuid = NULL, log = NULL,
+#'     tasks_summary = NULL, runtime_constraints = NULL, nondeterministic = NULL,
+#'     repository = NULL, supplied_script_version = NULL,
+#'     docker_image_locator = NULL, priority = NULL, description = NULL,
+#'     state = NULL, arvados_sdk_version = NULL, components = NULL,
+#'     script_parameters_digest = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{submit_id}{}
+#'     \item{script}{}
+#'     \item{script_version}{}
+#'     \item{script_parameters}{}
+#'     \item{cancelled_by_client_uuid}{}
+#'     \item{cancelled_by_user_uuid}{}
+#'     \item{cancelled_at}{}
+#'     \item{started_at}{}
+#'     \item{finished_at}{}
+#'     \item{running}{}
+#'     \item{success}{}
+#'     \item{output}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'     \item{is_locked_by_uuid}{}
+#'     \item{log}{}
+#'     \item{tasks_summary}{}
+#'     \item{runtime_constraints}{}
+#'     \item{nondeterministic}{}
+#'     \item{repository}{}
+#'     \item{supplied_script_version}{}
+#'     \item{docker_image_locator}{}
+#'     \item{priority}{}
+#'     \item{description}{}
+#'     \item{state}{}
+#'     \item{arvados_sdk_version}{}
+#'     \item{components}{}
+#'     \item{script_parameters_digest}{}
+#'   }
+#' 
+#' @name Job
+NULL
+
 #' @export
 Job <- R6::R6Class(
 
@@ -1263,15 +1885,15 @@ Job <- R6::R6Class(
                components = NULL,
                script_parameters_digest = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, submit_id = NULL, script = NULL,
-                               script_version = NULL, script_parameters = NULL,
-                               cancelled_by_client_uuid = NULL, cancelled_by_user_uuid = NULL,
-                               cancelled_at = NULL, started_at = NULL, finished_at = NULL,
-                               running = NULL, success = NULL, output = NULL,
-                               created_at = NULL, updated_at = NULL, is_locked_by_uuid = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               submit_id = NULL, script = NULL, script_version = NULL,
+                               script_parameters = NULL, cancelled_by_client_uuid = NULL,
+                               cancelled_by_user_uuid = NULL, cancelled_at = NULL,
+                               started_at = NULL, finished_at = NULL, running = NULL,
+                               success = NULL, output = NULL, created_at = NULL,
+                               updated_at = NULL, is_locked_by_uuid = NULL,
                                log = NULL, tasks_summary = NULL, runtime_constraints = NULL,
                                nondeterministic = NULL, repository = NULL,
                                supplied_script_version = NULL, docker_image_locator = NULL,
@@ -1314,18 +1936,17 @@ Job <- R6::R6Class(
                        self$components <- components
                        self$script_parameters_digest <- script_parameters_digest
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, submit_id,
-                               script, script_version, script_parameters,
-                               cancelled_by_client_uuid, cancelled_by_user_uuid,
-                               cancelled_at, started_at, finished_at, running,
-                               success, output, created_at, updated_at,
-                               is_locked_by_uuid, log, tasks_summary, runtime_constraints,
-                               nondeterministic, repository, supplied_script_version,
-                               docker_image_locator, priority, description,
-                               state, arvados_sdk_version, components, script_parameters_digest
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, submit_id, script, script_version,
+                               script_parameters, cancelled_by_client_uuid,
+                               cancelled_by_user_uuid, cancelled_at, started_at,
+                               finished_at, running, success, output, created_at,
+                               updated_at, is_locked_by_uuid, log, tasks_summary,
+                               runtime_constraints, nondeterministic, repository,
+                               supplied_script_version, docker_image_locator,
+                               priority, description, state, arvados_sdk_version,
+                               components, script_parameters_digest)
                },
 
                toJSON = function() {
@@ -1346,6 +1967,29 @@ Job <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' KeepDiskList
+#' 
+#' KeepDisk list
+#' 
+#' @section Usage:
+#' \preformatted{keepDiskList -> KeepDiskList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#keepDiskList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of KeepDisks.}
+#'     \item{next_link}{A link to the next page of KeepDisks.}
+#'     \item{next_page_token}{The page token for the next page of KeepDisks.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name KeepDiskList
+NULL
+
 #' @export
 KeepDiskList <- R6::R6Class(
 
@@ -1359,9 +2003,9 @@ KeepDiskList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -1370,10 +2014,8 @@ KeepDiskList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -1394,6 +2036,47 @@ KeepDiskList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' KeepDisk
+#' 
+#' KeepDisk
+#' 
+#' @section Usage:
+#' \preformatted{keepDisk -> KeepDisk$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, ping_secret = NULL,
+#'     node_uuid = NULL, filesystem_uuid = NULL, bytes_total = NULL,
+#'     bytes_free = NULL, is_readable = NULL, is_writable = NULL,
+#'     last_read_at = NULL, last_write_at = NULL, last_ping_at = NULL,
+#'     created_at = NULL, updated_at = NULL, keep_service_uuid = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{ping_secret}{}
+#'     \item{node_uuid}{}
+#'     \item{filesystem_uuid}{}
+#'     \item{bytes_total}{}
+#'     \item{bytes_free}{}
+#'     \item{is_readable}{}
+#'     \item{is_writable}{}
+#'     \item{last_read_at}{}
+#'     \item{last_write_at}{}
+#'     \item{last_ping_at}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'     \item{keep_service_uuid}{}
+#'   }
+#' 
+#' @name KeepDisk
+NULL
+
 #' @export
 KeepDisk <- R6::R6Class(
 
@@ -1420,15 +2103,14 @@ KeepDisk <- R6::R6Class(
                updated_at = NULL,
                keep_service_uuid = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, ping_secret = NULL, node_uuid = NULL,
-                               filesystem_uuid = NULL, bytes_total = NULL,
-                               bytes_free = NULL, is_readable = NULL, is_writable = NULL,
-                               last_read_at = NULL, last_write_at = NULL,
-                               last_ping_at = NULL, created_at = NULL, updated_at = NULL,
-                               keep_service_uuid = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               ping_secret = NULL, node_uuid = NULL, filesystem_uuid = NULL,
+                               bytes_total = NULL, bytes_free = NULL, is_readable = NULL,
+                               is_writable = NULL, last_read_at = NULL,
+                               last_write_at = NULL, last_ping_at = NULL,
+                               created_at = NULL, updated_at = NULL, keep_service_uuid = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -1450,14 +2132,12 @@ KeepDisk <- R6::R6Class(
                        self$updated_at <- updated_at
                        self$keep_service_uuid <- keep_service_uuid
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, ping_secret,
-                               node_uuid, filesystem_uuid, bytes_total,
-                               bytes_free, is_readable, is_writable, last_read_at,
-                               last_write_at, last_ping_at, created_at,
-                               updated_at, keep_service_uuid
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, ping_secret, node_uuid, filesystem_uuid,
+                               bytes_total, bytes_free, is_readable, is_writable,
+                               last_read_at, last_write_at, last_ping_at,
+                               created_at, updated_at, keep_service_uuid)
                },
 
                toJSON = function() {
@@ -1478,6 +2158,29 @@ KeepDisk <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' KeepServiceList
+#' 
+#' KeepService list
+#' 
+#' @section Usage:
+#' \preformatted{keepServiceList -> KeepServiceList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#keepServiceList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of KeepServices.}
+#'     \item{next_link}{A link to the next page of KeepServices.}
+#'     \item{next_page_token}{The page token for the next page of KeepServices.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name KeepServiceList
+NULL
+
 #' @export
 KeepServiceList <- R6::R6Class(
 
@@ -1491,9 +2194,9 @@ KeepServiceList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -1502,10 +2205,8 @@ KeepServiceList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -1526,6 +2227,39 @@ KeepServiceList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' KeepService
+#' 
+#' KeepService
+#' 
+#' @section Usage:
+#' \preformatted{keepService -> KeepService$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, service_host = NULL,
+#'     service_port = NULL, service_ssl_flag = NULL, service_type = NULL,
+#'     created_at = NULL, updated_at = NULL, read_only = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{service_host}{}
+#'     \item{service_port}{}
+#'     \item{service_ssl_flag}{}
+#'     \item{service_type}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'     \item{read_only}{}
+#'   }
+#' 
+#' @name KeepService
+NULL
+
 #' @export
 KeepService <- R6::R6Class(
 
@@ -1546,13 +2280,12 @@ KeepService <- R6::R6Class(
                updated_at = NULL,
                read_only = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, service_host = NULL,
-                               service_port = NULL, service_ssl_flag = NULL,
-                               service_type = NULL, created_at = NULL, updated_at = NULL,
-                               read_only = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               service_host = NULL, service_port = NULL,
+                               service_ssl_flag = NULL, service_type = NULL,
+                               created_at = NULL, updated_at = NULL, read_only = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -1568,12 +2301,11 @@ KeepService <- R6::R6Class(
                        self$updated_at <- updated_at
                        self$read_only <- read_only
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, service_host,
-                               service_port, service_ssl_flag, service_type,
-                               created_at, updated_at, read_only
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, service_host, service_port,
+                               service_ssl_flag, service_type, created_at,
+                               updated_at, read_only)
                },
 
                toJSON = function() {
@@ -1594,6 +2326,29 @@ KeepService <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' PipelineTemplateList
+#' 
+#' PipelineTemplate list
+#' 
+#' @section Usage:
+#' \preformatted{pipelineTemplateList -> PipelineTemplateList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#pipelineTemplateList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of PipelineTemplates.}
+#'     \item{next_link}{A link to the next page of PipelineTemplates.}
+#'     \item{next_page_token}{The page token for the next page of PipelineTemplates.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name PipelineTemplateList
+NULL
+
 #' @export
 PipelineTemplateList <- R6::R6Class(
 
@@ -1607,9 +2362,9 @@ PipelineTemplateList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -1618,10 +2373,8 @@ PipelineTemplateList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -1642,6 +2395,37 @@ PipelineTemplateList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' PipelineTemplate
+#' 
+#' PipelineTemplate
+#' 
+#' @section Usage:
+#' \preformatted{pipelineTemplate -> PipelineTemplate$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, created_at = NULL,
+#'     modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+#'     modified_at = NULL, name = NULL, components = NULL,
+#'     updated_at = NULL, description = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{name}{}
+#'     \item{components}{}
+#'     \item{updated_at}{}
+#'     \item{description}{}
+#'   }
+#' 
+#' @name PipelineTemplate
+NULL
+
 #' @export
 PipelineTemplate <- R6::R6Class(
 
@@ -1660,9 +2444,8 @@ PipelineTemplate <- R6::R6Class(
                updated_at = NULL,
                description = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_by_client_uuid = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
                                modified_by_user_uuid = NULL, modified_at = NULL,
                                name = NULL, components = NULL, updated_at = NULL,
                                description = NULL)
@@ -1679,11 +2462,10 @@ PipelineTemplate <- R6::R6Class(
                        self$updated_at <- updated_at
                        self$description <- description
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, name,
-                               components, updated_at, description
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, name, components, updated_at,
+                               description)
                },
 
                toJSON = function() {
@@ -1704,6 +2486,29 @@ PipelineTemplate <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' PipelineInstanceList
+#' 
+#' PipelineInstance list
+#' 
+#' @section Usage:
+#' \preformatted{pipelineInstanceList -> PipelineInstanceList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#pipelineInstanceList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of PipelineInstances.}
+#'     \item{next_link}{A link to the next page of PipelineInstances.}
+#'     \item{next_page_token}{The page token for the next page of PipelineInstances.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name PipelineInstanceList
+NULL
+
 #' @export
 PipelineInstanceList <- R6::R6Class(
 
@@ -1717,9 +2522,9 @@ PipelineInstanceList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -1728,10 +2533,8 @@ PipelineInstanceList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -1752,6 +2555,45 @@ PipelineInstanceList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' PipelineInstance
+#' 
+#' PipelineInstance
+#' 
+#' @section Usage:
+#' \preformatted{pipelineInstance -> PipelineInstance$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, created_at = NULL,
+#'     modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+#'     modified_at = NULL, pipeline_template_uuid = NULL,
+#'     name = NULL, components = NULL, updated_at = NULL,
+#'     properties = NULL, state = NULL, components_summary = NULL,
+#'     started_at = NULL, finished_at = NULL, description = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{pipeline_template_uuid}{}
+#'     \item{name}{}
+#'     \item{components}{}
+#'     \item{updated_at}{}
+#'     \item{properties}{}
+#'     \item{state}{}
+#'     \item{components_summary}{}
+#'     \item{started_at}{}
+#'     \item{finished_at}{}
+#'     \item{description}{}
+#'   }
+#' 
+#' @name PipelineInstance
+NULL
+
 #' @export
 PipelineInstance <- R6::R6Class(
 
@@ -1776,9 +2618,8 @@ PipelineInstance <- R6::R6Class(
                finished_at = NULL,
                description = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_by_client_uuid = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
                                modified_by_user_uuid = NULL, modified_at = NULL,
                                pipeline_template_uuid = NULL, name = NULL,
                                components = NULL, updated_at = NULL, properties = NULL,
@@ -1803,13 +2644,12 @@ PipelineInstance <- R6::R6Class(
                        self$finished_at <- finished_at
                        self$description <- description
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, pipeline_template_uuid,
-                               name, components, updated_at, properties,
-                               state, components_summary, started_at, finished_at,
-                               description
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, pipeline_template_uuid, name,
+                               components, updated_at, properties, state,
+                               components_summary, started_at, finished_at,
+                               description)
                },
 
                toJSON = function() {
@@ -1830,6 +2670,29 @@ PipelineInstance <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' NodeList
+#' 
+#' Node list
+#' 
+#' @section Usage:
+#' \preformatted{nodeList -> NodeList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#nodeList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Nodes.}
+#'     \item{next_link}{A link to the next page of Nodes.}
+#'     \item{next_page_token}{The page token for the next page of Nodes.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name NodeList
+NULL
+
 #' @export
 NodeList <- R6::R6Class(
 
@@ -1843,9 +2706,9 @@ NodeList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -1854,10 +2717,8 @@ NodeList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -1878,6 +2739,44 @@ NodeList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Node
+#' 
+#' Node
+#' 
+#' @section Usage:
+#' \preformatted{node -> Node$new(uuid = NULL, etag = NULL,
+#'     owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, slot_number = NULL,
+#'     hostname = NULL, domain = NULL, ip_address = NULL,
+#'     first_ping_at = NULL, last_ping_at = NULL, info = NULL,
+#'     updated_at = NULL, properties = NULL, job_uuid = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{slot_number}{}
+#'     \item{hostname}{}
+#'     \item{domain}{}
+#'     \item{ip_address}{}
+#'     \item{first_ping_at}{}
+#'     \item{last_ping_at}{}
+#'     \item{info}{}
+#'     \item{updated_at}{}
+#'     \item{properties}{}
+#'     \item{job_uuid}{}
+#'   }
+#' 
+#' @name Node
+NULL
+
 #' @export
 Node <- R6::R6Class(
 
@@ -1902,9 +2801,8 @@ Node <- R6::R6Class(
                properties = NULL,
                job_uuid = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_by_client_uuid = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
                                modified_by_user_uuid = NULL, modified_at = NULL,
                                slot_number = NULL, hostname = NULL, domain = NULL,
                                ip_address = NULL, first_ping_at = NULL,
@@ -1929,13 +2827,11 @@ Node <- R6::R6Class(
                        self$properties <- properties
                        self$job_uuid <- job_uuid
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, slot_number,
-                               hostname, domain, ip_address, first_ping_at,
-                               last_ping_at, info, updated_at, properties,
-                               job_uuid
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, slot_number, hostname, domain,
+                               ip_address, first_ping_at, last_ping_at,
+                               info, updated_at, properties, job_uuid)
                },
 
                toJSON = function() {
@@ -1956,6 +2852,29 @@ Node <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' RepositoryList
+#' 
+#' Repository list
+#' 
+#' @section Usage:
+#' \preformatted{repositoryList -> RepositoryList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#repositoryList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Repositories.}
+#'     \item{next_link}{A link to the next page of Repositories.}
+#'     \item{next_page_token}{The page token for the next page of Repositories.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name RepositoryList
+NULL
+
 #' @export
 RepositoryList <- R6::R6Class(
 
@@ -1969,9 +2888,9 @@ RepositoryList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -1980,10 +2899,8 @@ RepositoryList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -2004,6 +2921,34 @@ RepositoryList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Repository
+#' 
+#' Repository
+#' 
+#' @section Usage:
+#' \preformatted{repository -> Repository$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+#'     created_at = NULL, updated_at = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{name}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'   }
+#' 
+#' @name Repository
+NULL
+
 #' @export
 Repository <- R6::R6Class(
 
@@ -2020,11 +2965,10 @@ Repository <- R6::R6Class(
                created_at = NULL,
                updated_at = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, name = NULL, created_at = NULL,
-                               updated_at = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               name = NULL, created_at = NULL, updated_at = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -2036,11 +2980,9 @@ Repository <- R6::R6Class(
                        self$created_at <- created_at
                        self$updated_at <- updated_at
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, name,
-                               created_at, updated_at
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, name, created_at, updated_at)
                },
 
                toJSON = function() {
@@ -2061,6 +3003,29 @@ Repository <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' SpecimenList
+#' 
+#' Specimen list
+#' 
+#' @section Usage:
+#' \preformatted{specimenList -> SpecimenList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#specimenList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Specimens.}
+#'     \item{next_link}{A link to the next page of Specimens.}
+#'     \item{next_page_token}{The page token for the next page of Specimens.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name SpecimenList
+NULL
+
 #' @export
 SpecimenList <- R6::R6Class(
 
@@ -2074,9 +3039,9 @@ SpecimenList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -2085,10 +3050,8 @@ SpecimenList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -2109,6 +3072,36 @@ SpecimenList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Specimen
+#' 
+#' Specimen
+#' 
+#' @section Usage:
+#' \preformatted{specimen -> Specimen$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, created_at = NULL,
+#'     modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+#'     modified_at = NULL, material = NULL, updated_at = NULL,
+#'     properties = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{material}{}
+#'     \item{updated_at}{}
+#'     \item{properties}{}
+#'   }
+#' 
+#' @name Specimen
+NULL
+
 #' @export
 Specimen <- R6::R6Class(
 
@@ -2126,9 +3119,8 @@ Specimen <- R6::R6Class(
                updated_at = NULL,
                properties = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_by_client_uuid = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
                                modified_by_user_uuid = NULL, modified_at = NULL,
                                material = NULL, updated_at = NULL, properties = NULL)
                {
@@ -2143,11 +3135,9 @@ Specimen <- R6::R6Class(
                        self$updated_at <- updated_at
                        self$properties <- properties
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, material,
-                               updated_at, properties
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, material, updated_at, properties)
                },
 
                toJSON = function() {
@@ -2168,6 +3158,29 @@ Specimen <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' LogList
+#' 
+#' Log list
+#' 
+#' @section Usage:
+#' \preformatted{logList -> LogList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#logList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Logs.}
+#'     \item{next_link}{A link to the next page of Logs.}
+#'     \item{next_page_token}{The page token for the next page of Logs.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name LogList
+NULL
+
 #' @export
 LogList <- R6::R6Class(
 
@@ -2181,9 +3194,9 @@ LogList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -2192,10 +3205,8 @@ LogList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -2216,6 +3227,41 @@ LogList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Log
+#' 
+#' Log
+#' 
+#' @section Usage:
+#' \preformatted{log -> Log$new(uuid = NULL, etag = NULL,
+#'     owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, object_uuid = NULL, event_at = NULL,
+#'     event_type = NULL, summary = NULL, properties = NULL,
+#'     created_at = NULL, updated_at = NULL, modified_at = NULL,
+#'     object_owner_uuid = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{object_uuid}{}
+#'     \item{event_at}{}
+#'     \item{event_type}{}
+#'     \item{summary}{}
+#'     \item{properties}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'     \item{modified_at}{}
+#'     \item{object_owner_uuid}{}
+#'   }
+#' 
+#' @name Log
+NULL
+
 #' @export
 Log <- R6::R6Class(
 
@@ -2237,12 +3283,12 @@ Log <- R6::R6Class(
                modified_at = NULL,
                object_owner_uuid = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               object_uuid = NULL, event_at = NULL, event_type = NULL,
-                               summary = NULL, properties = NULL, created_at = NULL,
-                               updated_at = NULL, modified_at = NULL, object_owner_uuid = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, object_uuid = NULL,
+                               event_at = NULL, event_type = NULL, summary = NULL,
+                               properties = NULL, created_at = NULL, updated_at = NULL,
+                               modified_at = NULL, object_owner_uuid = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -2259,12 +3305,11 @@ Log <- R6::R6Class(
                        self$modified_at <- modified_at
                        self$object_owner_uuid <- object_owner_uuid
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, object_uuid, event_at,
-                               event_type, summary, properties, created_at,
-                               updated_at, modified_at, object_owner_uuid
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               object_uuid, event_at, event_type, summary,
+                               properties, created_at, updated_at, modified_at,
+                               object_owner_uuid)
                },
 
                toJSON = function() {
@@ -2285,6 +3330,29 @@ Log <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' TraitList
+#' 
+#' Trait list
+#' 
+#' @section Usage:
+#' \preformatted{traitList -> TraitList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#traitList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Traits.}
+#'     \item{next_link}{A link to the next page of Traits.}
+#'     \item{next_page_token}{The page token for the next page of Traits.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name TraitList
+NULL
+
 #' @export
 TraitList <- R6::R6Class(
 
@@ -2298,9 +3366,9 @@ TraitList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -2309,10 +3377,8 @@ TraitList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -2333,6 +3399,35 @@ TraitList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Trait
+#' 
+#' Trait
+#' 
+#' @section Usage:
+#' \preformatted{trait -> Trait$new(uuid = NULL, etag = NULL,
+#'     owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+#'     properties = NULL, created_at = NULL, updated_at = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{name}{}
+#'     \item{properties}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'   }
+#' 
+#' @name Trait
+NULL
+
 #' @export
 Trait <- R6::R6Class(
 
@@ -2350,11 +3445,11 @@ Trait <- R6::R6Class(
                created_at = NULL,
                updated_at = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, name = NULL, properties = NULL,
-                               created_at = NULL, updated_at = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               name = NULL, properties = NULL, created_at = NULL,
+                               updated_at = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -2367,11 +3462,10 @@ Trait <- R6::R6Class(
                        self$created_at <- created_at
                        self$updated_at <- updated_at
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, name,
-                               properties, created_at, updated_at
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, name, properties, created_at,
+                               updated_at)
                },
 
                toJSON = function() {
@@ -2392,6 +3486,29 @@ Trait <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' VirtualMachineList
+#' 
+#' VirtualMachine list
+#' 
+#' @section Usage:
+#' \preformatted{virtualMachineList -> VirtualMachineList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#virtualMachineList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of VirtualMachines.}
+#'     \item{next_link}{A link to the next page of VirtualMachines.}
+#'     \item{next_page_token}{The page token for the next page of VirtualMachines.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name VirtualMachineList
+NULL
+
 #' @export
 VirtualMachineList <- R6::R6Class(
 
@@ -2405,9 +3522,9 @@ VirtualMachineList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -2416,10 +3533,8 @@ VirtualMachineList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -2440,6 +3555,34 @@ VirtualMachineList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' VirtualMachine
+#' 
+#' VirtualMachine
+#' 
+#' @section Usage:
+#' \preformatted{virtualMachine -> VirtualMachine$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, hostname = NULL,
+#'     created_at = NULL, updated_at = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{hostname}{}
+#'     \item{created_at}{}
+#'     \item{updated_at}{}
+#'   }
+#' 
+#' @name VirtualMachine
+NULL
+
 #' @export
 VirtualMachine <- R6::R6Class(
 
@@ -2456,11 +3599,10 @@ VirtualMachine <- R6::R6Class(
                created_at = NULL,
                updated_at = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
-                               modified_at = NULL, hostname = NULL, created_at = NULL,
-                               updated_at = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, modified_by_client_uuid = NULL,
+                               modified_by_user_uuid = NULL, modified_at = NULL,
+                               hostname = NULL, created_at = NULL, updated_at = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -2472,11 +3614,9 @@ VirtualMachine <- R6::R6Class(
                        self$created_at <- created_at
                        self$updated_at <- updated_at
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, hostname,
-                               created_at, updated_at
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, hostname, created_at, updated_at)
                },
 
                toJSON = function() {
@@ -2497,6 +3637,29 @@ VirtualMachine <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' WorkflowList
+#' 
+#' Workflow list
+#' 
+#' @section Usage:
+#' \preformatted{workflowList -> WorkflowList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#workflowList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Workflows.}
+#'     \item{next_link}{A link to the next page of Workflows.}
+#'     \item{next_page_token}{The page token for the next page of Workflows.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name WorkflowList
+NULL
+
 #' @export
 WorkflowList <- R6::R6Class(
 
@@ -2510,9 +3673,9 @@ WorkflowList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -2521,10 +3684,8 @@ WorkflowList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -2545,6 +3706,37 @@ WorkflowList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Workflow
+#' 
+#' Workflow
+#' 
+#' @section Usage:
+#' \preformatted{workflow -> Workflow$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, created_at = NULL,
+#'     modified_at = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, name = NULL, description = NULL,
+#'     definition = NULL, updated_at = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{name}{}
+#'     \item{description}{}
+#'     \item{definition}{}
+#'     \item{updated_at}{}
+#'   }
+#' 
+#' @name Workflow
+NULL
+
 #' @export
 Workflow <- R6::R6Class(
 
@@ -2563,11 +3755,11 @@ Workflow <- R6::R6Class(
                definition = NULL,
                updated_at = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_at = NULL, modified_by_client_uuid = NULL,
-                               modified_by_user_uuid = NULL, name = NULL,
-                               description = NULL, definition = NULL, updated_at = NULL)
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_at = NULL,
+                               modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+                               name = NULL, description = NULL, definition = NULL,
+                               updated_at = NULL)
                {
                        self$uuid <- uuid
                        self$etag <- etag
@@ -2581,11 +3773,10 @@ Workflow <- R6::R6Class(
                        self$definition <- definition
                        self$updated_at <- updated_at
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_at,
-                               modified_by_client_uuid, modified_by_user_uuid,
-                               name, description, definition, updated_at
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_at, modified_by_client_uuid,
+                               modified_by_user_uuid, name, description,
+                               definition, updated_at)
                },
 
                toJSON = function() {
@@ -2606,6 +3797,29 @@ Workflow <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' GroupList
+#' 
+#' Group list
+#' 
+#' @section Usage:
+#' \preformatted{groupList -> GroupList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#groupList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of Groups.}
+#'     \item{next_link}{A link to the next page of Groups.}
+#'     \item{next_page_token}{The page token for the next page of Groups.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name GroupList
+NULL
+
 #' @export
 GroupList <- R6::R6Class(
 
@@ -2619,9 +3833,9 @@ GroupList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -2630,10 +3844,8 @@ GroupList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -2654,6 +3866,40 @@ GroupList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' Group
+#' 
+#' Group
+#' 
+#' @section Usage:
+#' \preformatted{group -> Group$new(uuid = NULL, etag = NULL,
+#'     owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
+#'     modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+#'     description = NULL, updated_at = NULL, group_class = NULL,
+#'     trash_at = NULL, is_trashed = NULL, delete_at = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{uuid}{}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{name}{}
+#'     \item{description}{}
+#'     \item{updated_at}{}
+#'     \item{group_class}{}
+#'     \item{trash_at}{}
+#'     \item{is_trashed}{}
+#'     \item{delete_at}{}
+#'   }
+#' 
+#' @name Group
+NULL
+
 #' @export
 Group <- R6::R6Class(
 
@@ -2675,9 +3921,8 @@ Group <- R6::R6Class(
                is_trashed = NULL,
                delete_at = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_by_client_uuid = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
                                modified_by_user_uuid = NULL, modified_at = NULL,
                                name = NULL, description = NULL, updated_at = NULL,
                                group_class = NULL, trash_at = NULL, is_trashed = NULL,
@@ -2698,12 +3943,10 @@ Group <- R6::R6Class(
                        self$is_trashed <- is_trashed
                        self$delete_at <- delete_at
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, name,
-                               description, updated_at, group_class, trash_at,
-                               is_trashed, delete_at
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, name, description, updated_at,
+                               group_class, trash_at, is_trashed, delete_at)
                },
 
                toJSON = function() {
@@ -2724,6 +3967,29 @@ Group <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' UserAgreementList
+#' 
+#' UserAgreement list
+#' 
+#' @section Usage:
+#' \preformatted{userAgreementList -> UserAgreementList$new(kind = NULL,
+#'     etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+#'     selfLink = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{kind}{Object type. Always arvados#userAgreementList.}
+#'     \item{etag}{List version.}
+#'     \item{items}{The list of UserAgreements.}
+#'     \item{next_link}{A link to the next page of UserAgreements.}
+#'     \item{next_page_token}{The page token for the next page of UserAgreements.}
+#'     \item{selfLink}{A link back to this list.}
+#'   }
+#' 
+#' @name UserAgreementList
+NULL
+
 #' @export
 UserAgreementList <- R6::R6Class(
 
@@ -2737,9 +4003,9 @@ UserAgreementList <- R6::R6Class(
                next_page_token = NULL,
                selfLink = NULL,
 
-               initialize = function(
-                               kind = NULL, etag = NULL, items = NULL, next_link = NULL,
-                               next_page_token = NULL, selfLink = NULL)
+               initialize = function(kind = NULL, etag = NULL,
+                               items = NULL, next_link = NULL, next_page_token = NULL,
+                               selfLink = NULL)
                {
                        self$kind <- kind
                        self$etag <- etag
@@ -2748,10 +4014,8 @@ UserAgreementList <- R6::R6Class(
                        self$next_page_token <- next_page_token
                        self$selfLink <- selfLink
                        
-                       private$classFields <- c(
-                               kind, etag, items, next_link, next_page_token,
-                               selfLink
-                       )
+                       private$classFields <- c(kind, etag, items,
+                               next_link, next_page_token, selfLink)
                },
 
                toJSON = function() {
@@ -2772,6 +4036,49 @@ UserAgreementList <- R6::R6Class(
        cloneable = FALSE
 )
 
+#' UserAgreement
+#' 
+#' UserAgreement
+#' 
+#' @section Usage:
+#' \preformatted{userAgreement -> UserAgreement$new(uuid = NULL,
+#'     etag = NULL, owner_uuid = NULL, created_at = NULL,
+#'     modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+#'     modified_at = NULL, portable_data_hash = NULL, replication_desired = NULL,
+#'     replication_confirmed_at = NULL, replication_confirmed = NULL,
+#'     updated_at = NULL, manifest_text = NULL, name = NULL,
+#'     description = NULL, properties = NULL, delete_at = NULL,
+#'     file_names = NULL, trash_at = NULL, is_trashed = NULL)
+#' }
+#' 
+#' @section Arguments:
+#'   \describe{
+#'     \item{uuid}{Object ID.}
+#'     \item{etag}{Object version.}
+#'     \item{owner_uuid}{}
+#'     \item{created_at}{}
+#'     \item{modified_by_client_uuid}{}
+#'     \item{modified_by_user_uuid}{}
+#'     \item{modified_at}{}
+#'     \item{portable_data_hash}{}
+#'     \item{replication_desired}{}
+#'     \item{replication_confirmed_at}{}
+#'     \item{replication_confirmed}{}
+#'     \item{updated_at}{}
+#'     \item{uuid}{}
+#'     \item{manifest_text}{}
+#'     \item{name}{}
+#'     \item{description}{}
+#'     \item{properties}{}
+#'     \item{delete_at}{}
+#'     \item{file_names}{}
+#'     \item{trash_at}{}
+#'     \item{is_trashed}{}
+#'   }
+#' 
+#' @name UserAgreement
+NULL
+
 #' @export
 UserAgreement <- R6::R6Class(
 
@@ -2799,9 +4106,8 @@ UserAgreement <- R6::R6Class(
                trash_at = NULL,
                is_trashed = NULL,
 
-               initialize = function(
-                               uuid = NULL, etag = NULL, owner_uuid = NULL,
-                               created_at = NULL, modified_by_client_uuid = NULL,
+               initialize = function(uuid = NULL, etag = NULL,
+                               owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
                                modified_by_user_uuid = NULL, modified_at = NULL,
                                portable_data_hash = NULL, replication_desired = NULL,
                                replication_confirmed_at = NULL, replication_confirmed = NULL,
@@ -2831,14 +4137,13 @@ UserAgreement <- R6::R6Class(
                        self$trash_at <- trash_at
                        self$is_trashed <- is_trashed
                        
-                       private$classFields <- c(
-                               uuid, etag, owner_uuid, created_at, modified_by_client_uuid,
-                               modified_by_user_uuid, modified_at, portable_data_hash,
-                               replication_desired, replication_confirmed_at,
-                               replication_confirmed, updated_at, manifest_text,
-                               name, description, properties, delete_at,
-                               file_names, trash_at, is_trashed
-                       )
+                       private$classFields <- c(uuid, etag, owner_uuid,
+                               created_at, modified_by_client_uuid, modified_by_user_uuid,
+                               modified_at, portable_data_hash, replication_desired,
+                               replication_confirmed_at, replication_confirmed,
+                               updated_at, manifest_text, name, description,
+                               properties, delete_at, file_names, trash_at,
+                               is_trashed)
                },
 
                toJSON = function() {
index 7dedfa50edd893d33658e4ef2e3d17b68eb47b31..4c3e5d65594ed0a55e981ffb62f694fbdd91c9b2 100644 (file)
@@ -139,14 +139,13 @@ getReturnObject <- function(functionMetaData, classMetaData)
 
 
     if(returnClass == "Collection")
-        return(c("collection <- Collection$new(",
-                 paste0("\t", splitArgs(classArguments, 40, ")")),
+        return(c(formatArgs("collection <- Collection$new(", "\t",
+                            classArguments, ")", 40),
                  "",
                  "collection$setRESTService(private$REST)",
                  "collection"))
 
-    c(paste0(returnClass, "$new("),
-      paste0("\t", splitArgs(classArguments, 40, ")")))
+    formatArgs(paste0(returnClass, "$new("), "\t", classArguments, ")", 40)
 }
 
 getReturnClassArguments <- function(className, classMetaData)
@@ -193,15 +192,9 @@ getRequestQueryList <- function(functionMetaData)
     collapsedArgs <- paste0(args, collapse = ", ")
 
     if(nchar(collapsedArgs) > 40)
-    {
-        formatedArgs <- splitArgs(args, 40, ")")
-        return(c(paste0("queryArgs <- list("),
-                 paste0("\t\t", formatedArgs)))
-    }
+        return(formatArgs("queryArgs <- list(", "\t", args, ")", 40))
     else
-    {
         return(paste0("queryArgs <- list(", collapsedArgs, ")"))
-    }
 }
 
 createFunction <- function(functionName, functionMetaData, classMetaData)
@@ -224,9 +217,9 @@ getFunSignature <- function(funName, args)
 
     if(nchar(collapsedArgs) > 40)
     {
-        formatedArgs <- splitArgs(args, 40, ")")
-        return(c(paste0("\t\t", funName, " = function("),
-                 paste0("\t\t\t\t", formatedArgs)))
+        return(paste0("\t\t",
+                      formatArgs(paste(funName, "= function("),
+                                 "\t", args, ")", 40)))
     }
     else
     {
@@ -310,10 +303,10 @@ getArvadosClass <- function(classSchema)
 {
     name   <- classSchema$id
     fields <- unique(names(classSchema$properties))
-    #fieldsList <- paste0("c(", paste0("\"", fields, "\"", collapse = ", "), ")")
     constructorArgs <- paste(fields, "= NULL")
+    documentation <- getClassDocumentation(classSchema, constructorArgs)
 
-    classString <- c("#' @export",
+    classString <- c(documentation,
               paste0(name, " <- R6::R6Class("),
                      "",
               paste0("\t\"", name, "\","),
@@ -321,14 +314,13 @@ getArvadosClass <- function(classSchema)
                      "\tpublic = list(",
               paste0("\t\t", fields, " = NULL,"),
                      "",
-                     "\t\tinitialize = function(",
-                     paste0("\t\t\t\t", splitArgs(constructorArgs, 40, ")")),
-                     "\t\t{", 
+              paste0("\t\t", formatArgs("initialize = function(", "\t\t",
+                                        constructorArgs, ")", 40)),
+                     "\t\t{",
               paste0("\t\t\tself$", fields, " <- ", fields),
                      "\t\t\t",
-                     "\t\t\tprivate$classFields <- c(",
-              paste0("\t\t\t\t", splitArgs(fields, 40)),
-                     "\t\t\t)",
+              paste0("\t\t\t", formatArgs("private$classFields <- c(", "\t",
+                                         fields, ")", 40)),
                      "\t\t},",
                      "",
                      "\t\ttoJSON = function() {",
@@ -351,12 +343,53 @@ getArvadosClass <- function(classSchema)
                      "")
 }
 
-splitArgs <- function(args, lineLength, appendAtEnd = "")
+getClassDocumentation <- function(classSchema, constructorArgs)
+{
+    name <- classSchema$id
+    description <- classSchema$description
+    nameLowercaseFirstLetter <- paste0(tolower(substr(name, 1, 1)),
+                                       substr(name, 2, nchar(name)))
+    c(paste0("#' ", name),
+             "#' ",
+      paste0("#' ", description),
+             "#' ",
+             "#' @section Usage:",
+             formatArgs(paste0("#' \\preformatted{",
+                               nameLowercaseFirstLetter, " -> ", name, "$new("),
+                        "#' \t", constructorArgs, ")", 50),
+
+             "#' }",
+             "#' ",
+      paste0("#' @section Arguments:"),
+             "#'   \\describe{",
+      paste0("#'     ", getClassArgumentDescription(classSchema)),
+             "#'   }",
+             "#' ",
+      paste0("#' @name ", name),
+             "NULL",
+             "",
+             "#' @export")
+}
+
+getClassArgumentDescription <- function(classSchema)
+{
+    argDoc <- sapply(classSchema$properties, function(arg)
+    {    
+        paste0("{", arg$description, "}")
+    }, USE.NAMES = TRUE)
+
+    paste0("\\item{", names(classSchema$properties), "}", argDoc)
+}
+
+formatArgs <- function(prependAtStart, prependToEachSplit,
+                       args, appendAtEnd, lineLength)
 {
-    
     if(length(args) > 1)
+    {
         args[1:(length(args) - 1)] <- paste0(args[1:(length(args) - 1)], ",") 
+    }
 
+    args[1] <- paste0(prependAtStart, args[1])
     args[length(args)] <- paste0(args[length(args)], appendAtEnd)
 
     argsLength <- length(args)
@@ -377,5 +410,11 @@ splitArgs <- function(args, lineLength, appendAtEnd = "")
         argLines <- c(argLines, line)
     }
     
-    unlist(argLines)
+    argLines <- unlist(argLines)
+    argLinesLen <- length(argLines)
+
+    if(argLinesLen > 1)
+        argLines[2:argLinesLen] <- paste0(prependToEachSplit, argLines[2:argLinesLen]) 
+
+    argLines
 }
diff --git a/sdk/R/man/ApiClient.Rd b/sdk/R/man/ApiClient.Rd
new file mode 100644 (file)
index 0000000..1a0aaa5
--- /dev/null
@@ -0,0 +1,36 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{ApiClient}
+\alias{ApiClient}
+\title{ApiClient}
+\description{
+ApiClient
+}
+\section{Usage}{
+
+\preformatted{apiClient -> ApiClient$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+       url_prefix = NULL, created_at = NULL, updated_at = NULL,
+       is_trusted = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{name}{}
+    \item{url_prefix}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+    \item{is_trusted}{}
+  }
+}
+
diff --git a/sdk/R/man/ApiClientAuthorization.Rd b/sdk/R/man/ApiClientAuthorization.Rd
new file mode 100644 (file)
index 0000000..ef74a16
--- /dev/null
@@ -0,0 +1,38 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{ApiClientAuthorization}
+\alias{ApiClientAuthorization}
+\title{ApiClientAuthorization}
+\description{
+ApiClientAuthorization
+}
+\section{Usage}{
+
+\preformatted{apiClientAuthorization -> ApiClientAuthorization$new(uuid = NULL,
+       etag = NULL, api_token = NULL, api_client_id = NULL,
+       user_id = NULL, created_by_ip_address = NULL, last_used_by_ip_address = NULL,
+       last_used_at = NULL, expires_at = NULL, created_at = NULL,
+       updated_at = NULL, default_owner_uuid = NULL, scopes = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{api_token}{}
+    \item{api_client_id}{}
+    \item{user_id}{}
+    \item{created_by_ip_address}{}
+    \item{last_used_by_ip_address}{}
+    \item{last_used_at}{}
+    \item{expires_at}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+    \item{default_owner_uuid}{}
+    \item{scopes}{}
+    \item{uuid}{}
+  }
+}
+
diff --git a/sdk/R/man/ApiClientAuthorizationList.Rd b/sdk/R/man/ApiClientAuthorizationList.Rd
new file mode 100644 (file)
index 0000000..9c3a6b5
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{ApiClientAuthorizationList}
+\alias{ApiClientAuthorizationList}
+\title{ApiClientAuthorizationList}
+\description{
+ApiClientAuthorization list
+}
+\section{Usage}{
+
+\preformatted{apiClientAuthorizationList -> ApiClientAuthorizationList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#apiClientAuthorizationList.}
+    \item{etag}{List version.}
+    \item{items}{The list of ApiClientAuthorizations.}
+    \item{next_link}{A link to the next page of ApiClientAuthorizations.}
+    \item{next_page_token}{The page token for the next page of ApiClientAuthorizations.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/ApiClientList.Rd b/sdk/R/man/ApiClientList.Rd
new file mode 100644 (file)
index 0000000..c632c3f
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{ApiClientList}
+\alias{ApiClientList}
+\title{ApiClientList}
+\description{
+ApiClient list
+}
+\section{Usage}{
+
+\preformatted{apiClientList -> ApiClientList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#apiClientList.}
+    \item{etag}{List version.}
+    \item{items}{The list of ApiClients.}
+    \item{next_link}{A link to the next page of ApiClients.}
+    \item{next_page_token}{The page token for the next page of ApiClients.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/AuthorizedKey.Rd b/sdk/R/man/AuthorizedKey.Rd
new file mode 100644 (file)
index 0000000..458b9ca
--- /dev/null
@@ -0,0 +1,38 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{AuthorizedKey}
+\alias{AuthorizedKey}
+\title{AuthorizedKey}
+\description{
+AuthorizedKey
+}
+\section{Usage}{
+
+\preformatted{authorizedKey -> AuthorizedKey$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+       key_type = NULL, authorized_user_uuid = NULL, public_key = NULL,
+       expires_at = NULL, created_at = NULL, updated_at = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{name}{}
+    \item{key_type}{}
+    \item{authorized_user_uuid}{}
+    \item{public_key}{}
+    \item{expires_at}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+  }
+}
+
diff --git a/sdk/R/man/AuthorizedKeyList.Rd b/sdk/R/man/AuthorizedKeyList.Rd
new file mode 100644 (file)
index 0000000..17c584f
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{AuthorizedKeyList}
+\alias{AuthorizedKeyList}
+\title{AuthorizedKeyList}
+\description{
+AuthorizedKey list
+}
+\section{Usage}{
+
+\preformatted{authorizedKeyList -> AuthorizedKeyList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#authorizedKeyList.}
+    \item{etag}{List version.}
+    \item{items}{The list of AuthorizedKeys.}
+    \item{next_link}{A link to the next page of AuthorizedKeys.}
+    \item{next_page_token}{The page token for the next page of AuthorizedKeys.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/CollectionList.Rd b/sdk/R/man/CollectionList.Rd
new file mode 100644 (file)
index 0000000..33bb954
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{CollectionList}
+\alias{CollectionList}
+\title{CollectionList}
+\description{
+Collection list
+}
+\section{Usage}{
+
+\preformatted{collectionList -> CollectionList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#collectionList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Collections.}
+    \item{next_link}{A link to the next page of Collections.}
+    \item{next_page_token}{The page token for the next page of Collections.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Container.Rd b/sdk/R/man/Container.Rd
new file mode 100644 (file)
index 0000000..bb078f2
--- /dev/null
@@ -0,0 +1,56 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Container}
+\alias{Container}
+\title{Container}
+\description{
+Container
+}
+\section{Usage}{
+
+\preformatted{container -> Container$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, created_at = NULL,
+       modified_at = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, state = NULL, started_at = NULL,
+       finished_at = NULL, log = NULL, environment = NULL,
+       cwd = NULL, command = NULL, output_path = NULL, mounts = NULL,
+       runtime_constraints = NULL, output = NULL, container_image = NULL,
+       progress = NULL, priority = NULL, updated_at = NULL,
+       exit_code = NULL, auth_uuid = NULL, locked_by_uuid = NULL,
+       scheduling_parameters = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{state}{}
+    \item{started_at}{}
+    \item{finished_at}{}
+    \item{log}{}
+    \item{environment}{}
+    \item{cwd}{}
+    \item{command}{}
+    \item{output_path}{}
+    \item{mounts}{}
+    \item{runtime_constraints}{}
+    \item{output}{}
+    \item{container_image}{}
+    \item{progress}{}
+    \item{priority}{}
+    \item{updated_at}{}
+    \item{exit_code}{}
+    \item{auth_uuid}{}
+    \item{locked_by_uuid}{}
+    \item{scheduling_parameters}{}
+  }
+}
+
diff --git a/sdk/R/man/ContainerList.Rd b/sdk/R/man/ContainerList.Rd
new file mode 100644 (file)
index 0000000..bfa8202
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{ContainerList}
+\alias{ContainerList}
+\title{ContainerList}
+\description{
+Container list
+}
+\section{Usage}{
+
+\preformatted{containerList -> ContainerList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#containerList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Containers.}
+    \item{next_link}{A link to the next page of Containers.}
+    \item{next_page_token}{The page token for the next page of Containers.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/ContainerRequest.Rd b/sdk/R/man/ContainerRequest.Rd
new file mode 100644 (file)
index 0000000..8b38410
--- /dev/null
@@ -0,0 +1,64 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{ContainerRequest}
+\alias{ContainerRequest}
+\title{ContainerRequest}
+\description{
+ContainerRequest
+}
+\section{Usage}{
+
+\preformatted{containerRequest -> ContainerRequest$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, created_at = NULL,
+       modified_at = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, name = NULL, description = NULL,
+       properties = NULL, state = NULL, requesting_container_uuid = NULL,
+       container_uuid = NULL, container_count_max = NULL,
+       mounts = NULL, runtime_constraints = NULL, container_image = NULL,
+       environment = NULL, cwd = NULL, command = NULL, output_path = NULL,
+       priority = NULL, expires_at = NULL, filters = NULL,
+       updated_at = NULL, container_count = NULL, use_existing = NULL,
+       scheduling_parameters = NULL, output_uuid = NULL, log_uuid = NULL,
+       output_name = NULL, output_ttl = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{name}{}
+    \item{description}{}
+    \item{properties}{}
+    \item{state}{}
+    \item{requesting_container_uuid}{}
+    \item{container_uuid}{}
+    \item{container_count_max}{}
+    \item{mounts}{}
+    \item{runtime_constraints}{}
+    \item{container_image}{}
+    \item{environment}{}
+    \item{cwd}{}
+    \item{command}{}
+    \item{output_path}{}
+    \item{priority}{}
+    \item{expires_at}{}
+    \item{filters}{}
+    \item{updated_at}{}
+    \item{container_count}{}
+    \item{use_existing}{}
+    \item{scheduling_parameters}{}
+    \item{output_uuid}{}
+    \item{log_uuid}{}
+    \item{output_name}{}
+    \item{output_ttl}{}
+  }
+}
+
diff --git a/sdk/R/man/ContainerRequestList.Rd b/sdk/R/man/ContainerRequestList.Rd
new file mode 100644 (file)
index 0000000..f44717d
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{ContainerRequestList}
+\alias{ContainerRequestList}
+\title{ContainerRequestList}
+\description{
+ContainerRequest list
+}
+\section{Usage}{
+
+\preformatted{containerRequestList -> ContainerRequestList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#containerRequestList.}
+    \item{etag}{List version.}
+    \item{items}{The list of ContainerRequests.}
+    \item{next_link}{A link to the next page of ContainerRequests.}
+    \item{next_page_token}{The page token for the next page of ContainerRequests.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Group.Rd b/sdk/R/man/Group.Rd
new file mode 100644 (file)
index 0000000..e7e9139
--- /dev/null
@@ -0,0 +1,39 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Group}
+\alias{Group}
+\title{Group}
+\description{
+Group
+}
+\section{Usage}{
+
+\preformatted{group -> Group$new(uuid = NULL, etag = NULL,
+       owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+       description = NULL, updated_at = NULL, group_class = NULL,
+       trash_at = NULL, is_trashed = NULL, delete_at = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{name}{}
+    \item{description}{}
+    \item{updated_at}{}
+    \item{group_class}{}
+    \item{trash_at}{}
+    \item{is_trashed}{}
+    \item{delete_at}{}
+  }
+}
+
diff --git a/sdk/R/man/GroupList.Rd b/sdk/R/man/GroupList.Rd
new file mode 100644 (file)
index 0000000..ddfc57b
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{GroupList}
+\alias{GroupList}
+\title{GroupList}
+\description{
+Group list
+}
+\section{Usage}{
+
+\preformatted{groupList -> GroupList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#groupList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Groups.}
+    \item{next_link}{A link to the next page of Groups.}
+    \item{next_page_token}{The page token for the next page of Groups.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Human.Rd b/sdk/R/man/Human.Rd
new file mode 100644 (file)
index 0000000..d90e576
--- /dev/null
@@ -0,0 +1,33 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Human}
+\alias{Human}
+\title{Human}
+\description{
+Human
+}
+\section{Usage}{
+
+\preformatted{human -> Human$new(uuid = NULL, etag = NULL,
+       owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, properties = NULL,
+       created_at = NULL, updated_at = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{properties}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+  }
+}
+
diff --git a/sdk/R/man/HumanList.Rd b/sdk/R/man/HumanList.Rd
new file mode 100644 (file)
index 0000000..4359f5e
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{HumanList}
+\alias{HumanList}
+\title{HumanList}
+\description{
+Human list
+}
+\section{Usage}{
+
+\preformatted{humanList -> HumanList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#humanList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Humans.}
+    \item{next_link}{A link to the next page of Humans.}
+    \item{next_page_token}{The page token for the next page of Humans.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Job.Rd b/sdk/R/man/Job.Rd
new file mode 100644 (file)
index 0000000..feb8546
--- /dev/null
@@ -0,0 +1,67 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Job}
+\alias{Job}
+\title{Job}
+\description{
+Job
+}
+\section{Usage}{
+
+\preformatted{job -> Job$new(uuid = NULL, etag = NULL,
+       owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, submit_id = NULL,
+       script = NULL, script_version = NULL, script_parameters = NULL,
+       cancelled_by_client_uuid = NULL, cancelled_by_user_uuid = NULL,
+       cancelled_at = NULL, started_at = NULL, finished_at = NULL,
+       running = NULL, success = NULL, output = NULL, created_at = NULL,
+       updated_at = NULL, is_locked_by_uuid = NULL, log = NULL,
+       tasks_summary = NULL, runtime_constraints = NULL, nondeterministic = NULL,
+       repository = NULL, supplied_script_version = NULL,
+       docker_image_locator = NULL, priority = NULL, description = NULL,
+       state = NULL, arvados_sdk_version = NULL, components = NULL,
+       script_parameters_digest = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{submit_id}{}
+    \item{script}{}
+    \item{script_version}{}
+    \item{script_parameters}{}
+    \item{cancelled_by_client_uuid}{}
+    \item{cancelled_by_user_uuid}{}
+    \item{cancelled_at}{}
+    \item{started_at}{}
+    \item{finished_at}{}
+    \item{running}{}
+    \item{success}{}
+    \item{output}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+    \item{is_locked_by_uuid}{}
+    \item{log}{}
+    \item{tasks_summary}{}
+    \item{runtime_constraints}{}
+    \item{nondeterministic}{}
+    \item{repository}{}
+    \item{supplied_script_version}{}
+    \item{docker_image_locator}{}
+    \item{priority}{}
+    \item{description}{}
+    \item{state}{}
+    \item{arvados_sdk_version}{}
+    \item{components}{}
+    \item{script_parameters_digest}{}
+  }
+}
+
diff --git a/sdk/R/man/JobList.Rd b/sdk/R/man/JobList.Rd
new file mode 100644 (file)
index 0000000..4302d77
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{JobList}
+\alias{JobList}
+\title{JobList}
+\description{
+Job list
+}
+\section{Usage}{
+
+\preformatted{jobList -> JobList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#jobList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Jobs.}
+    \item{next_link}{A link to the next page of Jobs.}
+    \item{next_page_token}{The page token for the next page of Jobs.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/JobTask.Rd b/sdk/R/man/JobTask.Rd
new file mode 100644 (file)
index 0000000..92b6e8f
--- /dev/null
@@ -0,0 +1,45 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{JobTask}
+\alias{JobTask}
+\title{JobTask}
+\description{
+JobTask
+}
+\section{Usage}{
+
+\preformatted{jobTask -> JobTask$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, job_uuid = NULL,
+       sequence = NULL, parameters = NULL, output = NULL,
+       progress = NULL, success = NULL, created_at = NULL,
+       updated_at = NULL, created_by_job_task_uuid = NULL,
+       qsequence = NULL, started_at = NULL, finished_at = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{job_uuid}{}
+    \item{sequence}{}
+    \item{parameters}{}
+    \item{output}{}
+    \item{progress}{}
+    \item{success}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+    \item{created_by_job_task_uuid}{}
+    \item{qsequence}{}
+    \item{started_at}{}
+    \item{finished_at}{}
+  }
+}
+
diff --git a/sdk/R/man/JobTaskList.Rd b/sdk/R/man/JobTaskList.Rd
new file mode 100644 (file)
index 0000000..1b40c64
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{JobTaskList}
+\alias{JobTaskList}
+\title{JobTaskList}
+\description{
+JobTask list
+}
+\section{Usage}{
+
+\preformatted{jobTaskList -> JobTaskList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#jobTaskList.}
+    \item{etag}{List version.}
+    \item{items}{The list of JobTasks.}
+    \item{next_link}{A link to the next page of JobTasks.}
+    \item{next_page_token}{The page token for the next page of JobTasks.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/KeepDisk.Rd b/sdk/R/man/KeepDisk.Rd
new file mode 100644 (file)
index 0000000..08a9b50
--- /dev/null
@@ -0,0 +1,46 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{KeepDisk}
+\alias{KeepDisk}
+\title{KeepDisk}
+\description{
+KeepDisk
+}
+\section{Usage}{
+
+\preformatted{keepDisk -> KeepDisk$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, ping_secret = NULL,
+       node_uuid = NULL, filesystem_uuid = NULL, bytes_total = NULL,
+       bytes_free = NULL, is_readable = NULL, is_writable = NULL,
+       last_read_at = NULL, last_write_at = NULL, last_ping_at = NULL,
+       created_at = NULL, updated_at = NULL, keep_service_uuid = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{ping_secret}{}
+    \item{node_uuid}{}
+    \item{filesystem_uuid}{}
+    \item{bytes_total}{}
+    \item{bytes_free}{}
+    \item{is_readable}{}
+    \item{is_writable}{}
+    \item{last_read_at}{}
+    \item{last_write_at}{}
+    \item{last_ping_at}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+    \item{keep_service_uuid}{}
+  }
+}
+
diff --git a/sdk/R/man/KeepDiskList.Rd b/sdk/R/man/KeepDiskList.Rd
new file mode 100644 (file)
index 0000000..e94bf7f
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{KeepDiskList}
+\alias{KeepDiskList}
+\title{KeepDiskList}
+\description{
+KeepDisk list
+}
+\section{Usage}{
+
+\preformatted{keepDiskList -> KeepDiskList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#keepDiskList.}
+    \item{etag}{List version.}
+    \item{items}{The list of KeepDisks.}
+    \item{next_link}{A link to the next page of KeepDisks.}
+    \item{next_page_token}{The page token for the next page of KeepDisks.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/KeepService.Rd b/sdk/R/man/KeepService.Rd
new file mode 100644 (file)
index 0000000..00e80d4
--- /dev/null
@@ -0,0 +1,38 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{KeepService}
+\alias{KeepService}
+\title{KeepService}
+\description{
+KeepService
+}
+\section{Usage}{
+
+\preformatted{keepService -> KeepService$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, service_host = NULL,
+       service_port = NULL, service_ssl_flag = NULL, service_type = NULL,
+       created_at = NULL, updated_at = NULL, read_only = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{service_host}{}
+    \item{service_port}{}
+    \item{service_ssl_flag}{}
+    \item{service_type}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+    \item{read_only}{}
+  }
+}
+
diff --git a/sdk/R/man/KeepServiceList.Rd b/sdk/R/man/KeepServiceList.Rd
new file mode 100644 (file)
index 0000000..7e76d00
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{KeepServiceList}
+\alias{KeepServiceList}
+\title{KeepServiceList}
+\description{
+KeepService list
+}
+\section{Usage}{
+
+\preformatted{keepServiceList -> KeepServiceList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#keepServiceList.}
+    \item{etag}{List version.}
+    \item{items}{The list of KeepServices.}
+    \item{next_link}{A link to the next page of KeepServices.}
+    \item{next_page_token}{The page token for the next page of KeepServices.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Link.Rd b/sdk/R/man/Link.Rd
new file mode 100644 (file)
index 0000000..3d6f004
--- /dev/null
@@ -0,0 +1,38 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Link}
+\alias{Link}
+\title{Link}
+\description{
+Link
+}
+\section{Usage}{
+
+\preformatted{link -> Link$new(uuid = NULL, etag = NULL,
+       owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, tail_uuid = NULL,
+       link_class = NULL, name = NULL, head_uuid = NULL, properties = NULL,
+       updated_at = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{tail_uuid}{}
+    \item{link_class}{}
+    \item{name}{}
+    \item{head_uuid}{}
+    \item{properties}{}
+    \item{updated_at}{}
+  }
+}
+
diff --git a/sdk/R/man/LinkList.Rd b/sdk/R/man/LinkList.Rd
new file mode 100644 (file)
index 0000000..ea8b625
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{LinkList}
+\alias{LinkList}
+\title{LinkList}
+\description{
+Link list
+}
+\section{Usage}{
+
+\preformatted{linkList -> LinkList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#linkList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Links.}
+    \item{next_link}{A link to the next page of Links.}
+    \item{next_page_token}{The page token for the next page of Links.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Log.Rd b/sdk/R/man/Log.Rd
new file mode 100644 (file)
index 0000000..244c75a
--- /dev/null
@@ -0,0 +1,40 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Log}
+\alias{Log}
+\title{Log}
+\description{
+Log
+}
+\section{Usage}{
+
+\preformatted{log -> Log$new(uuid = NULL, etag = NULL,
+       owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, object_uuid = NULL, event_at = NULL,
+       event_type = NULL, summary = NULL, properties = NULL,
+       created_at = NULL, updated_at = NULL, modified_at = NULL,
+       object_owner_uuid = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{object_uuid}{}
+    \item{event_at}{}
+    \item{event_type}{}
+    \item{summary}{}
+    \item{properties}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+    \item{modified_at}{}
+    \item{object_owner_uuid}{}
+  }
+}
+
diff --git a/sdk/R/man/LogList.Rd b/sdk/R/man/LogList.Rd
new file mode 100644 (file)
index 0000000..2a979d0
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{LogList}
+\alias{LogList}
+\title{LogList}
+\description{
+Log list
+}
+\section{Usage}{
+
+\preformatted{logList -> LogList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#logList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Logs.}
+    \item{next_link}{A link to the next page of Logs.}
+    \item{next_page_token}{The page token for the next page of Logs.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Node.Rd b/sdk/R/man/Node.Rd
new file mode 100644 (file)
index 0000000..3c9d661
--- /dev/null
@@ -0,0 +1,43 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Node}
+\alias{Node}
+\title{Node}
+\description{
+Node
+}
+\section{Usage}{
+
+\preformatted{node -> Node$new(uuid = NULL, etag = NULL,
+       owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, slot_number = NULL,
+       hostname = NULL, domain = NULL, ip_address = NULL,
+       first_ping_at = NULL, last_ping_at = NULL, info = NULL,
+       updated_at = NULL, properties = NULL, job_uuid = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{slot_number}{}
+    \item{hostname}{}
+    \item{domain}{}
+    \item{ip_address}{}
+    \item{first_ping_at}{}
+    \item{last_ping_at}{}
+    \item{info}{}
+    \item{updated_at}{}
+    \item{properties}{}
+    \item{job_uuid}{}
+  }
+}
+
diff --git a/sdk/R/man/NodeList.Rd b/sdk/R/man/NodeList.Rd
new file mode 100644 (file)
index 0000000..67616af
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{NodeList}
+\alias{NodeList}
+\title{NodeList}
+\description{
+Node list
+}
+\section{Usage}{
+
+\preformatted{nodeList -> NodeList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#nodeList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Nodes.}
+    \item{next_link}{A link to the next page of Nodes.}
+    \item{next_page_token}{The page token for the next page of Nodes.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/PipelineInstance.Rd b/sdk/R/man/PipelineInstance.Rd
new file mode 100644 (file)
index 0000000..004e19f
--- /dev/null
@@ -0,0 +1,44 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{PipelineInstance}
+\alias{PipelineInstance}
+\title{PipelineInstance}
+\description{
+PipelineInstance
+}
+\section{Usage}{
+
+\preformatted{pipelineInstance -> PipelineInstance$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, created_at = NULL,
+       modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+       modified_at = NULL, pipeline_template_uuid = NULL,
+       name = NULL, components = NULL, updated_at = NULL,
+       properties = NULL, state = NULL, components_summary = NULL,
+       started_at = NULL, finished_at = NULL, description = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{pipeline_template_uuid}{}
+    \item{name}{}
+    \item{components}{}
+    \item{updated_at}{}
+    \item{properties}{}
+    \item{state}{}
+    \item{components_summary}{}
+    \item{started_at}{}
+    \item{finished_at}{}
+    \item{description}{}
+  }
+}
+
diff --git a/sdk/R/man/PipelineInstanceList.Rd b/sdk/R/man/PipelineInstanceList.Rd
new file mode 100644 (file)
index 0000000..7d02c8b
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{PipelineInstanceList}
+\alias{PipelineInstanceList}
+\title{PipelineInstanceList}
+\description{
+PipelineInstance list
+}
+\section{Usage}{
+
+\preformatted{pipelineInstanceList -> PipelineInstanceList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#pipelineInstanceList.}
+    \item{etag}{List version.}
+    \item{items}{The list of PipelineInstances.}
+    \item{next_link}{A link to the next page of PipelineInstances.}
+    \item{next_page_token}{The page token for the next page of PipelineInstances.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/PipelineTemplate.Rd b/sdk/R/man/PipelineTemplate.Rd
new file mode 100644 (file)
index 0000000..eecf3d3
--- /dev/null
@@ -0,0 +1,36 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{PipelineTemplate}
+\alias{PipelineTemplate}
+\title{PipelineTemplate}
+\description{
+PipelineTemplate
+}
+\section{Usage}{
+
+\preformatted{pipelineTemplate -> PipelineTemplate$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, created_at = NULL,
+       modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+       modified_at = NULL, name = NULL, components = NULL,
+       updated_at = NULL, description = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{name}{}
+    \item{components}{}
+    \item{updated_at}{}
+    \item{description}{}
+  }
+}
+
diff --git a/sdk/R/man/PipelineTemplateList.Rd b/sdk/R/man/PipelineTemplateList.Rd
new file mode 100644 (file)
index 0000000..0cc0172
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{PipelineTemplateList}
+\alias{PipelineTemplateList}
+\title{PipelineTemplateList}
+\description{
+PipelineTemplate list
+}
+\section{Usage}{
+
+\preformatted{pipelineTemplateList -> PipelineTemplateList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#pipelineTemplateList.}
+    \item{etag}{List version.}
+    \item{items}{The list of PipelineTemplates.}
+    \item{next_link}{A link to the next page of PipelineTemplates.}
+    \item{next_page_token}{The page token for the next page of PipelineTemplates.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Repository.Rd b/sdk/R/man/Repository.Rd
new file mode 100644 (file)
index 0000000..8f9913d
--- /dev/null
@@ -0,0 +1,33 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Repository}
+\alias{Repository}
+\title{Repository}
+\description{
+Repository
+}
+\section{Usage}{
+
+\preformatted{repository -> Repository$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+       created_at = NULL, updated_at = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{name}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+  }
+}
+
diff --git a/sdk/R/man/RepositoryList.Rd b/sdk/R/man/RepositoryList.Rd
new file mode 100644 (file)
index 0000000..e7c585e
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{RepositoryList}
+\alias{RepositoryList}
+\title{RepositoryList}
+\description{
+Repository list
+}
+\section{Usage}{
+
+\preformatted{repositoryList -> RepositoryList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#repositoryList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Repositories.}
+    \item{next_link}{A link to the next page of Repositories.}
+    \item{next_page_token}{The page token for the next page of Repositories.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Specimen.Rd b/sdk/R/man/Specimen.Rd
new file mode 100644 (file)
index 0000000..29d1c4e
--- /dev/null
@@ -0,0 +1,35 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Specimen}
+\alias{Specimen}
+\title{Specimen}
+\description{
+Specimen
+}
+\section{Usage}{
+
+\preformatted{specimen -> Specimen$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, created_at = NULL,
+       modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+       modified_at = NULL, material = NULL, updated_at = NULL,
+       properties = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{material}{}
+    \item{updated_at}{}
+    \item{properties}{}
+  }
+}
+
diff --git a/sdk/R/man/SpecimenList.Rd b/sdk/R/man/SpecimenList.Rd
new file mode 100644 (file)
index 0000000..7a88cdd
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{SpecimenList}
+\alias{SpecimenList}
+\title{SpecimenList}
+\description{
+Specimen list
+}
+\section{Usage}{
+
+\preformatted{specimenList -> SpecimenList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#specimenList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Specimens.}
+    \item{next_link}{A link to the next page of Specimens.}
+    \item{next_page_token}{The page token for the next page of Specimens.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Trait.Rd b/sdk/R/man/Trait.Rd
new file mode 100644 (file)
index 0000000..d476259
--- /dev/null
@@ -0,0 +1,34 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Trait}
+\alias{Trait}
+\title{Trait}
+\description{
+Trait
+}
+\section{Usage}{
+
+\preformatted{trait -> Trait$new(uuid = NULL, etag = NULL,
+       owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, name = NULL,
+       properties = NULL, created_at = NULL, updated_at = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{name}{}
+    \item{properties}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+  }
+}
+
diff --git a/sdk/R/man/TraitList.Rd b/sdk/R/man/TraitList.Rd
new file mode 100644 (file)
index 0000000..b5ae767
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{TraitList}
+\alias{TraitList}
+\title{TraitList}
+\description{
+Trait list
+}
+\section{Usage}{
+
+\preformatted{traitList -> TraitList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#traitList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Traits.}
+    \item{next_link}{A link to the next page of Traits.}
+    \item{next_page_token}{The page token for the next page of Traits.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/User.Rd b/sdk/R/man/User.Rd
new file mode 100644 (file)
index 0000000..6fe8350
--- /dev/null
@@ -0,0 +1,43 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{User}
+\alias{User}
+\title{User}
+\description{
+User
+}
+\section{Usage}{
+
+\preformatted{user -> User$new(uuid = NULL, etag = NULL,
+       owner_uuid = NULL, created_at = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, email = NULL,
+       first_name = NULL, last_name = NULL, identity_url = NULL,
+       is_admin = NULL, prefs = NULL, updated_at = NULL, default_owner_uuid = NULL,
+       is_active = NULL, username = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{email}{}
+    \item{first_name}{}
+    \item{last_name}{}
+    \item{identity_url}{}
+    \item{is_admin}{}
+    \item{prefs}{}
+    \item{updated_at}{}
+    \item{default_owner_uuid}{}
+    \item{is_active}{}
+    \item{username}{}
+  }
+}
+
diff --git a/sdk/R/man/UserAgreement.Rd b/sdk/R/man/UserAgreement.Rd
new file mode 100644 (file)
index 0000000..f9d67ae
--- /dev/null
@@ -0,0 +1,48 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{UserAgreement}
+\alias{UserAgreement}
+\title{UserAgreement}
+\description{
+UserAgreement
+}
+\section{Usage}{
+
+\preformatted{userAgreement -> UserAgreement$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, created_at = NULL,
+       modified_by_client_uuid = NULL, modified_by_user_uuid = NULL,
+       modified_at = NULL, portable_data_hash = NULL, replication_desired = NULL,
+       replication_confirmed_at = NULL, replication_confirmed = NULL,
+       updated_at = NULL, manifest_text = NULL, name = NULL,
+       description = NULL, properties = NULL, delete_at = NULL,
+       file_names = NULL, trash_at = NULL, is_trashed = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{portable_data_hash}{}
+    \item{replication_desired}{}
+    \item{replication_confirmed_at}{}
+    \item{replication_confirmed}{}
+    \item{updated_at}{}
+    \item{uuid}{}
+    \item{manifest_text}{}
+    \item{name}{}
+    \item{description}{}
+    \item{properties}{}
+    \item{delete_at}{}
+    \item{file_names}{}
+    \item{trash_at}{}
+    \item{is_trashed}{}
+  }
+}
+
diff --git a/sdk/R/man/UserAgreementList.Rd b/sdk/R/man/UserAgreementList.Rd
new file mode 100644 (file)
index 0000000..22a2d0e
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{UserAgreementList}
+\alias{UserAgreementList}
+\title{UserAgreementList}
+\description{
+UserAgreement list
+}
+\section{Usage}{
+
+\preformatted{userAgreementList -> UserAgreementList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#userAgreementList.}
+    \item{etag}{List version.}
+    \item{items}{The list of UserAgreements.}
+    \item{next_link}{A link to the next page of UserAgreements.}
+    \item{next_page_token}{The page token for the next page of UserAgreements.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/UserList.Rd b/sdk/R/man/UserList.Rd
new file mode 100644 (file)
index 0000000..369bf53
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{UserList}
+\alias{UserList}
+\title{UserList}
+\description{
+User list
+}
+\section{Usage}{
+
+\preformatted{userList -> UserList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#userList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Users.}
+    \item{next_link}{A link to the next page of Users.}
+    \item{next_page_token}{The page token for the next page of Users.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/VirtualMachine.Rd b/sdk/R/man/VirtualMachine.Rd
new file mode 100644 (file)
index 0000000..47cc12a
--- /dev/null
@@ -0,0 +1,33 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{VirtualMachine}
+\alias{VirtualMachine}
+\title{VirtualMachine}
+\description{
+VirtualMachine
+}
+\section{Usage}{
+
+\preformatted{virtualMachine -> VirtualMachine$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, modified_at = NULL, hostname = NULL,
+       created_at = NULL, updated_at = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{modified_at}{}
+    \item{hostname}{}
+    \item{created_at}{}
+    \item{updated_at}{}
+  }
+}
+
diff --git a/sdk/R/man/VirtualMachineList.Rd b/sdk/R/man/VirtualMachineList.Rd
new file mode 100644 (file)
index 0000000..80f6f97
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{VirtualMachineList}
+\alias{VirtualMachineList}
+\title{VirtualMachineList}
+\description{
+VirtualMachine list
+}
+\section{Usage}{
+
+\preformatted{virtualMachineList -> VirtualMachineList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#virtualMachineList.}
+    \item{etag}{List version.}
+    \item{items}{The list of VirtualMachines.}
+    \item{next_link}{A link to the next page of VirtualMachines.}
+    \item{next_page_token}{The page token for the next page of VirtualMachines.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+
diff --git a/sdk/R/man/Workflow.Rd b/sdk/R/man/Workflow.Rd
new file mode 100644 (file)
index 0000000..cf1fdbd
--- /dev/null
@@ -0,0 +1,36 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{Workflow}
+\alias{Workflow}
+\title{Workflow}
+\description{
+Workflow
+}
+\section{Usage}{
+
+\preformatted{workflow -> Workflow$new(uuid = NULL,
+       etag = NULL, owner_uuid = NULL, created_at = NULL,
+       modified_at = NULL, modified_by_client_uuid = NULL,
+       modified_by_user_uuid = NULL, name = NULL, description = NULL,
+       definition = NULL, updated_at = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{uuid}{Object ID.}
+    \item{etag}{Object version.}
+    \item{uuid}{}
+    \item{owner_uuid}{}
+    \item{created_at}{}
+    \item{modified_at}{}
+    \item{modified_by_client_uuid}{}
+    \item{modified_by_user_uuid}{}
+    \item{name}{}
+    \item{description}{}
+    \item{definition}{}
+    \item{updated_at}{}
+  }
+}
+
diff --git a/sdk/R/man/WorkflowList.Rd b/sdk/R/man/WorkflowList.Rd
new file mode 100644 (file)
index 0000000..4b7b28d
--- /dev/null
@@ -0,0 +1,28 @@
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/ArvadosClasses.R
+\name{WorkflowList}
+\alias{WorkflowList}
+\title{WorkflowList}
+\description{
+Workflow list
+}
+\section{Usage}{
+
+\preformatted{workflowList -> WorkflowList$new(kind = NULL,
+       etag = NULL, items = NULL, next_link = NULL, next_page_token = NULL,
+       selfLink = NULL)
+}
+}
+
+\section{Arguments}{
+
+  \describe{
+    \item{kind}{Object type. Always arvados#workflowList.}
+    \item{etag}{List version.}
+    \item{items}{The list of Workflows.}
+    \item{next_link}{A link to the next page of Workflows.}
+    \item{next_page_token}{The page token for the next page of Workflows.}
+    \item{selfLink}{A link back to this list.}
+  }
+}
+