13931: Add test that file sizes are available.

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

diff --git a/sdk/cwl/tests/13931-size-job.yml b/sdk/cwl/tests/13931-size-job.yml
new file mode 100644 (file)
index 0000000..97b46dd
--- /dev/null
+++ b/sdk/cwl/tests/13931-size-job.yml
@@ -0,0 +1,3 @@
+fastq1:
+  class: File
+  location: keep:20850f01122e860fb878758ac1320877+71/sample1_S01_R1_001.fastq.gz
\ No newline at end of file

diff --git a/sdk/cwl/tests/13931-size.cwl b/sdk/cwl/tests/13931-size.cwl
new file mode 100644 (file)
index 0000000..aed1bd6
--- /dev/null
+++ b/sdk/cwl/tests/13931-size.cwl
@@ -0,0 +1,10 @@
+cwlVersion: v1.0
+class: CommandLineTool
+inputs:
+  fastq1: File
+outputs:
+  out: stdout
+baseCommand: echo
+arguments:
+  - $(inputs.fastq1.size)
+stdout: size.txt
\ No newline at end of file

diff --git a/sdk/cwl/tests/arvados-tests.sh b/sdk/cwl/tests/arvados-tests.sh
index 4869e3e524153af30feb6a654e65e2cac6c57f3f..8635aae65507fadb6be76d27156167855440ac68 100755 (executable)
--- a/sdk/cwl/tests/arvados-tests.sh
+++ b/sdk/cwl/tests/arvados-tests.sh
@@ -12,4 +12,8 @@ fi
 if ! arv-get 4d8a70b1e63b2aad6984e40e338e2373+69 > /dev/null ; then
     arv-put --portable-data-hash secondaryFiles/hello.txt*
 fi
+if ! arv-get 20850f01122e860fb878758ac1320877+71 > /dev/null ; then
+    arv-put --portable-data-hash samples/sample1_S01_R1_001.fastq.gz
+fi
+
 exec cwltest --test arvados-tests.yml --tool arvados-cwl-runner $@ -- --disable-reuse --compute-checksum