loadingContext, runtimeContext = self.helper(runner)
runner.fs_access = runtimeContext.make_fs_access(runtimeContext.basedir)
+ mockcollectionreader().exists.return_value = True
+
tool, metadata = loadingContext.loader.resolve_ref("tests/wf/scatter2.cwl")
metadata["cwlVersion"] = tool["cwlVersion"]
@mock.patch("time.sleep")
@stubs
def test_submit_file_keepref(self, stubs, tm, collectionReader):
+ collectionReader().exists.return_value = True
collectionReader().find.return_value = arvados.arvfile.ArvadosFile(mock.MagicMock(), "blorp.txt")
exited = arvados_cwl.main(
["--submit", "--no-wait", "--api=containers", "--debug",
@mock.patch("arvados.collection.CollectionReader")
@stubs
def test_submit_uuid_inputs(self, stubs, collectionReader):
+ collectionReader().exists.return_value = True
collectionReader().find.return_value = arvados.arvfile.ArvadosFile(mock.MagicMock(), "file1.txt")
def list_side_effect(**kwargs):
m = mock.MagicMock()