cwl_runner_version=$(cd sdk/cwl && python3 arvados_version.py)
}
+# Usage: get_native_arch
+get_native_arch() {
+ # Only amd64 and aarch64 are supported at the moment
+ local native_arch=""
+ case "$HOSTTYPE" in
+ x86_64)
+ native_arch="amd64"
+ ;;
+ aarch64)
+ native_arch="arm64"
+ ;;
+ *)
+ echo "Error: architecture not supported"
+ exit 1
+ ;;
+ esac
+ echo $native_arch
+}
+
handle_ruby_gem() {
local gem_name="$1"; shift
local gem_version="$(nohash_version_from_git)"
__returnvar="$version"
}
-# Usage: package_go_binary services/foo arvados-foo "Compute foo to arbitrary precision" [apache-2.0.txt]
+# Usage: package_go_binary services/foo arvados-foo [deb|rpm] [amd64|arm64] "Compute foo to arbitrary precision" [apache-2.0.txt]
package_go_binary() {
+ local src_path="$1"; shift
+ local prog="$1"; shift
+ local package_format="$1"; shift
+ local target_arch="$1"; shift
+ local description="$1"; shift
+ local license_file="${1:-agpl-3.0.txt}"; shift
+
+ if [[ -n "$ONLY_BUILD" ]] && [[ "$prog" != "$ONLY_BUILD" ]]; then
+ # arvados-workbench depends on arvados-server at build time, so even when
+ # only arvados-workbench is being built, we need to build arvados-server too
+ if [[ "$prog" != "arvados-server" ]] || [[ "$ONLY_BUILD" != "arvados-workbench" ]]; then
+ debug_echo -e "Skipping build of $prog package."
+ return 0
+ fi
+ fi
+
+ native_arch=$(get_native_arch)
+
+ if [[ "$native_arch" != "amd64" ]] && [[ -n "$target_arch" ]] && [[ "$native_arch" != "$target_arch" ]]; then
+ echo "Error: no cross compilation support for Go on $native_arch yet, can not build $prog for $target_arch"
+ return 1
+ fi
+
+ if [[ -n "$target_arch" ]]; then
+ # A target architecture has been specified
+ package_go_binary_worker "$src_path" "$prog" "$package_format" "$description" "$native_arch" "$target_arch" "$license_file"
+ return $?
+ else
+ # No target architecture specified, default to native target. When on amd64 also crosscompile arm64
+ # but only when building deb packages (centos does not have support for crosscompiling userspace).
+ archs=($native_arch)
+ if [[ "$native_arch" == "amd64" ]] &&
+ [[ "$package_format" == "deb" ]] &&
+ [[ "$TARGET" != "debian10" ]] &&
+ [[ "$TARGET" != "ubuntu1804" ]] &&
+ [[ "$TARGET" != "ubuntu2004" ]]; then
+ # Due to bug https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=983477 the libfuse-dev package for arm64 does
+ # not install properly side by side with the amd64 version before Debian 11.
+ archs+=("arm64")
+ fi
+ for ta in ${archs[@]}; do
+ package_go_binary_worker "$src_path" "$prog" "$package_format" "$description" "$native_arch" "$ta" "$license_file"
+ retval=$?
+ if [[ $retval -ne 0 ]]; then
+ return $retval
+ fi
+ done
+ fi
+}
+
+# Usage: package_go_binary services/foo arvados-foo deb "Compute foo to arbitrary precision" [amd64/arm64] [amd64/arm64] [apache-2.0.txt]
+package_go_binary_worker() {
local src_path="$1"; shift
local prog="$1"; shift
+ local package_format="$1"; shift
local description="$1"; shift
+ local native_arch="${1:-amd64}"; shift
+ local target_arch="${1:-amd64}"; shift
local license_file="${1:-agpl-3.0.txt}"; shift
- if [[ -n "$ONLY_BUILD" ]] && [[ "$prog" != "$ONLY_BUILD" ]]; then
- # arvados-workbench depends on arvados-server at build time, so even when
- # only arvados-workbench is being built, we need to build arvados-server too
- if [[ "$prog" != "arvados-server" ]] || [[ "$ONLY_BUILD" != "arvados-workbench" ]]; then
- return 0
- fi
+ if [[ "$native_arch" != "$target_arch" ]] && [[ "$package_format" == "rpm" ]]; then
+ echo "Error: no cross compilation support for Go on $native_arch ($package_format), can not build $prog for $target_arch"
+ return 1
fi
- debug_echo "package_go_binary $src_path as $prog"
-
+ debug_echo "package_go_binary $src_path as $prog (native arch: $native_arch, target arch: $target_arch)"
local basename="${src_path##*/}"
calculate_go_package_version go_package_version $src_path
cd $WORKSPACE/packages/$TARGET
- test_package_presence $prog $go_package_version go
-
- if [[ "$?" != "0" ]]; then
- return 1
+ test_package_presence "$prog" "$go_package_version" "go" "" "$target_arch"
+ if [[ $? -ne 0 ]]; then
+ return 0
fi
- go install -ldflags "-X git.arvados.org/arvados.git/lib/cmd.version=${go_package_version} -X main.version=${go_package_version}" "git.arvados.org/arvados.git/$src_path"
+ echo "Building $package_format ($target_arch) package for $prog from $src_path"
+ if [[ "$native_arch" == "amd64" ]] && [[ "$target_arch" == "arm64" ]]; then
- CGO_ENABLED=1 CC=aarch64-linux-gnu-gcc GOARCH=${target_arch} go get -ldflags "-X git.arvados.org/arvados.git/lib/cmd.version=${go_package_version} -X main.version=${go_package_version}" "git.arvados.org/arvados.git/$src_path"
++ CGO_ENABLED=1 CC=aarch64-linux-gnu-gcc GOARCH=${target_arch} go install -ldflags "-X git.arvados.org/arvados.git/lib/cmd.version=${go_package_version} -X main.version=${go_package_version}" "git.arvados.org/arvados.git/$src_path"
+ else
- GOARCH=${arch} go get -ldflags "-X git.arvados.org/arvados.git/lib/cmd.version=${go_package_version} -X main.version=${go_package_version}" "git.arvados.org/arvados.git/$src_path"
++ GOARCH=${arch} go install -ldflags "-X git.arvados.org/arvados.git/lib/cmd.version=${go_package_version} -X main.version=${go_package_version}" "git.arvados.org/arvados.git/$src_path"
+ fi
local -a switches=()
+
+ binpath=$GOPATH/bin/${basename}
+ if [[ "${target_arch}" != "${native_arch}" ]]; then
+ switches+=("-a${target_arch}")
+ binpath="$GOPATH/bin/linux_${target_arch}/${basename}"
+ fi
+
systemd_unit="$WORKSPACE/${src_path}/${prog}.service"
if [[ -e "${systemd_unit}" ]]; then
switches+=(
fi
switches+=("$WORKSPACE/${license_file}=/usr/share/doc/$prog/${license_file}")
- fpm_build "${WORKSPACE}/${src_path}" "$GOPATH/bin/${basename}=/usr/bin/${prog}" "${prog}" dir "${go_package_version}" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=${description}" "${switches[@]}"
+ fpm_build "${WORKSPACE}/${src_path}" "$binpath=/usr/bin/${prog}" "${prog}" dir "${go_package_version}" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=${description}" "${switches[@]}"
}
-# Usage: package_go_so lib/foo arvados_foo.so arvados-foo "Arvados foo library"
+# Usage: package_go_so lib/foo arvados_foo.so arvados-foo deb amd64 "Arvados foo library"
package_go_so() {
local src_path="$1"; shift
local sofile="$1"; shift
local pkg="$1"; shift
+ local package_format="$1"; shift
+ local target_arch="$1"; shift # supported: amd64, arm64
local description="$1"; shift
+ if [[ -n "$ONLY_BUILD" ]] && [[ "$pkg" != "$ONLY_BUILD" ]]; then
+ debug_echo -e "Skipping build of $pkg package."
+ return 0
+ fi
+
debug_echo "package_go_so $src_path as $pkg"
calculate_go_package_version go_package_version $src_path
fi
if [[ "$arch" == "" ]]; then
- rpm_architecture="x86_64"
- deb_architecture="amd64"
+ native_arch=$(get_native_arch)
+ rpm_native_arch="x86_64"
+ if [[ "$HOSTTYPE" == "aarch64" ]]; then
+ rpm_native_arch="arm64"
+ fi
+ rpm_architecture="$rpm_native_arch"
+ deb_architecture="$native_arch"
if [[ "$pkgtype" =~ ^(src)$ ]]; then
rpm_architecture="noarch"
deb_architecture="all"
fi
-
- # These python packages have binary components
- if [[ "$pkgname" =~ (ruamel|ciso|pycrypto|pyyaml) ]]; then
- rpm_architecture="x86_64"
- deb_architecture="amd64"
- fi
else
rpm_architecture=$arch
deb_architecture=$arch
fi
local full_pkgname
- get_complete_package_name full_pkgname $pkgname $version $pkgtype $iteration $arch
+ get_complete_package_name full_pkgname "$pkgname" "$version" "$pkgtype" "$iteration" "$arch"
# See if we can skip building the package, only if it already exists in the
# processed/ directory. If so, move it back to the packages directory to make
rm -rf "$scripts_dir"
}
+# Usage: handle_api_server [amd64|arm64]
+handle_api_server () {
+ local target_arch="${1:-amd64}"; shift
+
+ if [[ -n "$ONLY_BUILD" ]] && [[ "$ONLY_BUILD" != "arvados-api-server" ]] ; then
+ debug_echo -e "Skipping build of arvados-api-server package."
+ return 0
+ fi
+
+ native_arch=$(get_native_arch)
+ if [[ "$target_arch" != "$native_arch" ]]; then
+ echo "Error: no cross compilation support for Rails yet, can not build arvados-api-server for $ARCH"
+ echo
+ exit 1
+ fi
+
+ # Build the API server package
+ test_rails_package_presence arvados-api-server "$WORKSPACE/services/api"
+ if [[ "$?" == "0" ]]; then
+ calculate_go_package_version arvados_server_version cmd/arvados-server
+ arvados_server_iteration=$(default_iteration "arvados-server" "$arvados_server_version" "go")
+ handle_rails_package arvados-api-server "$WORKSPACE/services/api" \
+ "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
+ --description="Arvados API server - Arvados is a free and open source platform for big data science." \
+ --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
+ fi
+}
+
+# Usage: handle_workbench [amd64|arm64]
+handle_workbench () {
+ local target_arch="${1:-amd64}"; shift
+ if [[ -n "$ONLY_BUILD" ]] && [[ "$ONLY_BUILD" != "arvados-workbench" ]] ; then
+ debug_echo -e "Skipping build of arvados-workbench package."
+ return 0
+ fi
+
+ native_arch=$(get_native_arch)
+ if [[ "$target_arch" != "$native_arch" ]]; then
+ echo "Error: no cross compilation support for Rails yet, can not build arvados-workbench for $native_arch"
+ echo
+ exit 1
+ fi
+
+ if [[ "$native_arch" != "amd64" ]]; then
+ echo "Error: building the arvados-workbench package is not yet supported on this architecture ($native_arch)."
+ echo
+ exit 1
+ fi
+
+ # Build the workbench server package
+ test_rails_package_presence arvados-workbench "$WORKSPACE/apps/workbench"
+ if [[ "$?" == "0" ]] ; then
+ (
+ set -e
+
+ calculate_go_package_version arvados_server_version cmd/arvados-server
+ arvados_server_iteration=$(default_iteration "arvados-server" "$arvados_server_version" "go")
+
+ # The workbench package has a build-time dependency on the arvados-server
+ # package for config manipulation, so install it first.
+ cd $WORKSPACE/cmd/arvados-server
+ get_complete_package_name arvados_server_pkgname arvados-server ${arvados_server_version} go
+
+ arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/${arvados_server_pkgname}"
+ if [[ ! -e ${arvados_server_pkg_path} ]]; then
+ arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/processed/${arvados_server_pkgname}"
+ fi
+ if [[ "$FORMAT" == "deb" ]]; then
+ dpkg -i ${arvados_server_pkg_path}
+ else
+ rpm -i ${arvados_server_pkg_path}
+ fi
+
+ cd "$WORKSPACE/apps/workbench"
+
+ # We need to bundle to be ready even when we build a package without vendor directory
+ # because asset compilation requires it.
+ bundle install --system >"$STDOUT_IF_DEBUG"
+
+ # clear the tmp directory; the asset generation step will recreate tmp/cache/assets,
+ # and we want that in the package, so it's easier to not exclude the tmp directory
+ # from the package - empty it instead.
+ rm -rf tmp
+ mkdir tmp
+
+ # Set up an appropriate config.yml
+ arvados-server config-dump -config <(cat /etc/arvados/config.yml 2>/dev/null || echo "Clusters: {zzzzz: {}}") > /tmp/x
+ mkdir -p /etc/arvados/
+ mv /tmp/x /etc/arvados/config.yml
+ perl -p -i -e 'BEGIN{undef $/;} s/WebDAV(.*?):\n( *)ExternalURL: ""/WebDAV$1:\n$2ExternalURL: "example.com"/g' /etc/arvados/config.yml
+
+ ARVADOS_CONFIG=none RAILS_ENV=production RAILS_GROUPS=assets bin/rake npm:install >"$STDOUT_IF_DEBUG"
+ ARVADOS_CONFIG=none RAILS_ENV=production RAILS_GROUPS=assets bin/rake assets:precompile >"$STDOUT_IF_DEBUG"
+
+ # Remove generated configuration files so they don't go in the package.
+ rm -rf /etc/arvados/
+ )
+
+ if [[ "$?" != "0" ]]; then
+ echo "ERROR: Asset precompilation failed"
+ EXITCODE=1
+ else
+ handle_rails_package arvados-workbench "$WORKSPACE/apps/workbench" \
+ "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
+ --description="Arvados Workbench - Arvados is a free and open source platform for big data science." \
+ --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
+ fi
+ fi
+}
+
+# Usage: handle_cwltest [deb|rpm] [amd64|arm64]
+handle_cwltest () {
+ local package_format="$1"; shift
+ local target_arch="${1:-amd64}"; shift
+
+ if [[ -n "$ONLY_BUILD" ]] && [[ "$ONLY_BUILD" != "python3-cwltest" ]] ; then
+ debug_echo -e "Skipping build of cwltest package."
+ return 0
+ fi
+ cd "$WORKSPACE"
+ if [[ -e "$WORKSPACE/cwltest" ]]; then
+ rm -rf "$WORKSPACE/cwltest"
+ fi
+ git clone https://github.com/common-workflow-language/cwltest.git
+ # signal to our build script that we want a cwltest executable installed in /usr/bin/
+ mkdir cwltest/bin && touch cwltest/bin/cwltest
+ fpm_build_virtualenv "cwltest" "cwltest" "$package_format" "$target_arch"
+ # The python->python3 metapackage
+ build_metapackage "cwltest" "cwltest"
+ cd "$WORKSPACE"
+ rm -rf "$WORKSPACE/cwltest"
+}
+
+# Usage: handle_arvados_src
+handle_arvados_src () {
+ if [[ -n "$ONLY_BUILD" ]] && [[ "$ONLY_BUILD" != "arvados-src" ]] ; then
+ debug_echo -e "Skipping build of arvados-src package."
+ return 0
+ fi
+ # arvados-src
+ (
+ cd "$WORKSPACE"
+ COMMIT_HASH=$(format_last_commit_here "%H")
+ arvados_src_version="$(version_from_git)"
+
+ cd $WORKSPACE/packages/$TARGET
+ test_package_presence arvados-src "$arvados_src_version" src ""
+
+ if [[ "$?" == "0" ]]; then
+ cd "$WORKSPACE"
+ SRC_BUILD_DIR=$(mktemp -d)
+ # mktemp creates the directory with 0700 permissions by default
+ chmod 755 $SRC_BUILD_DIR
+ git clone $DASHQ_UNLESS_DEBUG "$WORKSPACE/.git" "$SRC_BUILD_DIR"
+ cd "$SRC_BUILD_DIR"
+
+ # go into detached-head state
+ git checkout $DASHQ_UNLESS_DEBUG "$COMMIT_HASH"
+ echo "$COMMIT_HASH" >git-commit.version
+
+ cd $WORKSPACE/packages/$TARGET
+ fpm_build "$WORKSPACE" $SRC_BUILD_DIR/=/usr/local/arvados/src arvados-src 'dir' "$arvados_src_version" "--exclude=usr/local/arvados/src/.git" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=The Arvados source code" "--architecture=all"
+
+ rm -rf "$SRC_BUILD_DIR"
+ fi
+ )
+}
+
+# Usage: handle_libarvados_perl
+handle_libarvados_perl () {
+ if [[ -n "$ONLY_BUILD" ]] || [[ "$ONLY_BUILD" != "libarvados-perl" ]] ; then
+ debug_echo -e "Skipping build of libarvados-perl package."
+ return 0
+ fi
+ cd "$WORKSPACE/sdk/perl"
+ libarvados_perl_version="$(version_from_git)"
+
+ cd $WORKSPACE/packages/$TARGET
+ test_package_presence libarvados-perl "$libarvados_perl_version"
+
+ if [[ "$?" == "0" ]]; then
+ cd "$WORKSPACE/sdk/perl"
+
+ if [[ -e Makefile ]]; then
+ make realclean >"$STDOUT_IF_DEBUG"
+ fi
+ find -maxdepth 1 \( -name 'MANIFEST*' -or -name "libarvados-perl*.$FORMAT" \) \
+ -delete
+ rm -rf install
+
+ perl Makefile.PL INSTALL_BASE=install >"$STDOUT_IF_DEBUG" && \
+ make install INSTALLDIRS=perl >"$STDOUT_IF_DEBUG" && \
+ fpm_build "$WORKSPACE/sdk/perl" install/lib/=/usr/share libarvados-perl \
+ dir "$(version_from_git)" install/man/=/usr/share/man \
+ "$WORKSPACE/apache-2.0.txt=/usr/share/doc/libarvados-perl/apache-2.0.txt" && \
+ mv --no-clobber libarvados-perl*.$FORMAT "$WORKSPACE/packages/$TARGET/"
+ fi
+}
+
# Build python packages with a virtualenv built-in
+# Usage: fpm_build_virtualenv arvados-python-client sdk/python [deb|rpm] [amd64|arm64]
fpm_build_virtualenv () {
- PKG=$1
- shift
- PKG_DIR=$1
- shift
- PACKAGE_TYPE=${1:-python}
- shift
+ local pkg=$1; shift
+ local pkg_dir=$1; shift
+ local package_format="$1"; shift
+ local target_arch="${1:-amd64}"; shift
+
+ native_arch=$(get_native_arch)
+
+ if [[ "$pkg" != "arvados-docker-cleaner" ]]; then
+ PYTHON_PKG=$PYTHON3_PKG_PREFIX-$pkg
+ else
+ # Exception to our package naming convention
+ PYTHON_PKG=$pkg
+ fi
+
+ if [[ -n "$ONLY_BUILD" ]] && [[ "$PYTHON_PKG" != "$ONLY_BUILD" ]]; then
+ # arvados-python-client sdist should always be built if we are building a
+ # python package.
+ if [[ "$ONLY_BUILD" != "python3-arvados-cwl-runner" ]] &&
+ [[ "$ONLY_BUILD" != "python3-arvados-fuse" ]] &&
+ [[ "$ONLY_BUILD" != "python3-crunchstat-summary" ]] &&
+ [[ "$ONLY_BUILD" != "arvados-docker-cleaner" ]] &&
+ [[ "$ONLY_BUILD" != "python3-arvados-user-activity" ]]; then
+ debug_echo -e "Skipping build of $pkg package."
+ return 0
+ fi
+ fi
+
+ if [[ -n "$target_arch" ]] && [[ "$native_arch" == "$target_arch" ]]; then
+ fpm_build_virtualenv_worker "$pkg" "$pkg_dir" "$package_format" "$native_arch" "$target_arch"
+ elif [[ -z "$target_arch" ]]; then
+ fpm_build_virtualenv_worker "$pkg" "$pkg_dir" "$package_format" "$native_arch" "$native_arch"
+ else
+ echo "Error: no cross compilation support for Python yet, can not build $pkg for $target_arch"
+ return 1
+ fi
+}
+
+# Build python packages with a virtualenv built-in
+# Usage: fpm_build_virtualenv_worker arvados-python-client sdk/python python3 [deb|rpm] [amd64|arm64] [amd64|arm64]
+fpm_build_virtualenv_worker () {
+ PKG=$1; shift
+ PKG_DIR=$1; shift
+ local package_format="$1"; shift
+ local native_arch="${1:-amd64}"; shift
+ local target_arch=${1:-amd64}; shift
# Set up
STDOUT_IF_DEBUG=/dev/null
ARVADOS_BUILDING_ITERATION=1
fi
- local python=""
- case "$PACKAGE_TYPE" in
- python3)
- python=python3
- pip=pip3
- PACKAGE_PREFIX=$PYTHON3_PKG_PREFIX
- ;;
- esac
+ local python=python3
+ pip=pip3
+ PACKAGE_PREFIX=$PYTHON3_PKG_PREFIX
if [[ "$PKG" != "arvados-docker-cleaner" ]]; then
PYTHON_PKG=$PACKAGE_PREFIX-$PKG
PYTHON_PKG=$PKG
fi
- # arvados-python-client sdist should always be built, to be available
- # for other dependent packages.
- if [[ -n "$ONLY_BUILD" ]] && [[ "arvados-python-client" != "$PKG" ]] && [[ "$PYTHON_PKG" != "$ONLY_BUILD" ]] && [[ "$PKG" != "$ONLY_BUILD" ]]; then
- return 0
- fi
-
cd $WORKSPACE/$PKG_DIR
rm -rf dist/*
# We can't do this earlier than here, because we need PYTHON_VERSION...
# This isn't so bad; the sdist call above is pretty quick compared to
# the invocation of virtualenv and fpm, below.
- if ! test_package_presence "$PYTHON_PKG" $UNFILTERED_PYTHON_VERSION $PACKAGE_TYPE $ARVADOS_BUILDING_ITERATION; then
+ if ! test_package_presence "$PYTHON_PKG" "$UNFILTERED_PYTHON_VERSION" "$python" "$ARVADOS_BUILDING_ITERATION" "$target_arch"; then
return 0
fi
- echo "Building $FORMAT package for $PKG from $PKG_DIR"
+ echo "Building $package_format ($target_arch) package for $PKG from $PKG_DIR"
# Package the sdist in a virtualenv
echo "Creating virtualenv..."
# Finally, generate the package
echo "Creating package..."
- declare -a COMMAND_ARR=("fpm" "-s" "dir" "-t" "$FORMAT")
+ declare -a COMMAND_ARR=("fpm" "-s" "dir" "-t" "$package_format")
+
+ if [[ -n "$target_arch" ]] && [[ "$target_arch" != "amd64" ]]; then
+ COMMAND_ARR+=("-a$target_arch")
+ fi
if [[ "$MAINTAINER" != "" ]]; then
COMMAND_ARR+=('--maintainer' "$MAINTAINER")
LICENSE_STRING=`grep license $WORKSPACE/$PKG_DIR/setup.py|cut -f2 -d=|sed -e "s/[',\\"]//g"`
COMMAND_ARR+=('--license' "$LICENSE_STRING")
- if [[ "$FORMAT" == "rpm" ]]; then
+ if [[ "$package_format" == "rpm" ]]; then
# Make sure to conflict with the old rh-python36 packages we used to publish
COMMAND_ARR+=('--conflicts' "rh-python36-python-$PKG")
fi
echo
echo -e "\n${COMMAND_ARR[@]}\n"
else
- echo `ls *$FORMAT`
- mv $WORKSPACE/$PKG_DIR/dist/*$FORMAT $WORKSPACE/packages/$TARGET/
+ echo `ls *$package_format`
+ mv $WORKSPACE/$PKG_DIR/dist/*$package_format $WORKSPACE/packages/$TARGET/
fi
echo
}
projects / arvados.git / commitdiff