{% endcomment %}
{% include 'notebox_begin' %}
-This tutorial assumes you are using the default Arvados instance, @qr1hi@. If you are using a different instance, replace @qr1hi@ with your instance. See "Accessing Arvados Workbench":{{site.baseurl}}/user/getting_started/workbench.html for more details.
+This tutorial assumes you are using the playground Arvados instance, @qr1hi@. If you are using a different instance, replace @qr1hi@ with your instance. See "Accessing Arvados Workbench":{{site.baseurl}}/user/getting_started/workbench.html for more details.
{% include 'notebox_end' %}
+++ /dev/null
----
-layout: default
-navsection: installguide
-title: Copy pipeline from the Arvados Playground
-...
-{% comment %}
-Copyright (C) The Arvados Authors. All rights reserved.
-
-SPDX-License-Identifier: CC-BY-SA-3.0
-{% endcomment %}
-
-This tutorial describes how to find and copy a publicly shared pipeline from the Arvados Playground. Please note that you can use similar steps to copy any template you can access from the Arvados Playground to your cluster.
-
-h3. Access a public pipeline in the Arvados Playground using Workbench
-
-the Arvados Playground provides access to some public data, which can be used to experience Arvados in action. Let's access a public pipeline and copy it to your cluster, so that you can run it in your environment.
-
-Start by visiting the "*Arvados Playground public projects page*":https://playground.arvados.org/projects/public. This page lists all the publicly accessible projects in this arvados installation. Click on one of these projects to open it. We will use "*lobSTR v.3 (Public)*":https://playground.arvados.org/projects/qr1hi-j7d0g-up6qgpqz5ie2vfq as the example in this tutorial.
-
-Once in the "*lobSTR v.3 (Public)*":https://playground.arvados.org/projects/qr1hi-j7d0g-up6qgpqz5ie2vfq project, click on the *Pipeline templates* tab. In the pipeline templates tab, you will see a template named *lobSTR v.3*. Click on the <span class="fa fa-lg fa-gears"></span> *Show* button to the left of this name. This will take to you to the "*lobSTR v.3*":https://playground.arvados.org/pipeline_templates/qr1hi-p5p6p-9pkaxt6qjnkxhhu template page.
-
-Once in this page, you can take the *uuid* of this template from the address bar, which is *qr1hi-p5p6p-9pkaxt6qjnkxhhu*. Next, we will copy this template to your Arvados instance.
-
-h3. Copying a pipeline template from the Arvados Playground to your cluster
-
-As described above, navigate to the publicly shared pipeline template "*lobSTR v.3*":https://playground.arvados.org/pipeline_templates/qr1hi-p5p6p-9pkaxt6qjnkxhhu on the Arvados Playground. We will now copy this template with uuid *qr1hi-p5p6p-9pkaxt6qjnkxhhu* to your cluster.
-
-{% include 'tutorial_expectations' %}
-
-We will use the Arvados *arv-copy* command to copy this template to your cluster. In order to use arv-copy, first you need to setup the source and destination cluster configuration files. Here, *qr1hi* would be the source cluster and your Arvados instance would be the *dst_cluster*.
-
-During this setup, if you have an account in the Arvados Playground, you can use "your access token":#using-your-token to create the source configuration file. If you do not have an account in the Arvados Playground, you can use the "anonymous access token":#using-anonymous-token for the source cluster configuration.
-
-h4(#using-anonymous-token). *Configuring source and destination setup files using anonymous access token*
-
-Configure the source and destination clusters as described in the "*Using arv-copy*":http://doc.arvados.org/user/topics/arv-copy.html tutorial in user guide, while using *5vqmz9mik2ou2k9objb8pnyce8t97p6vocyaouqo3qalvpmjs5* as the API token for source configuration.
-
-<notextile>
-<pre><code>~$ <span class="userinput">cd ~/.config/arvados</span>
-~$ <span class="userinput">echo "ARVADOS_API_HOST=qr1hi.arvadosapi.com" >> qr1hi.conf</span>
-~$ <span class="userinput">echo "ARVADOS_API_TOKEN=5vqmz9mik2ou2k9objb8pnyce8t97p6vocyaouqo3qalvpmjs5" >> qr1hi.conf</span>
-</code></pre>
-</notextile>
-
-You can now copy the pipeline template from *qr1hi* to *your cluster*. Replace *dst_cluster* with the *ClusterID* of your cluster.
-
-<notextile>
-<pre><code>~$ <span class="userinput"> arv-copy --no-recursive --src qr1hi --dst dst_cluster qr1hi-p5p6p-9pkaxt6qjnkxhhu</span>
-</code></pre>
-</notextile>
-
-*Note:* When you are using anonymous access token to copy the template, you will not be able to do a recursive copy since you will not be able to provide the dst-git-repo parameter. In order to perform a recursive copy of the template, you would need to use the Arvados API token from your account as explained in the "using your token":#using-your-token section below.
-
-h4(#using-your-token). *Configuring source and destination setup files using personal access token*
-
-If you already have an account in the Arvados Playground, you can follow the instructions in the "*Using arv-copy*":http://doc.arvados.org/user/topics/arv-copy.html user guide to get your *Current token* for source and destination clusters, and use them to create the source *qr1hi.conf* and dst_cluster.conf configuration files.
-
-You can now copy the pipeline template from *qr1hi* to *your cluster* with or without recursion. Replace *dst_cluster* with the *ClusterID* of your cluster.
-
-*Non-recursive copy:*
-<notextile>
-<pre><code>~$ <span class="userinput"> arv-copy --no-recursive --src qr1hi --dst dst_cluster qr1hi-p5p6p-9pkaxt6qjnkxhhu</span></code></pre>
-</notextile>
-
-*Recursive copy:*
-<notextile>
-<pre><code>~$ <span class="userinput">arv-copy --src qr1hi --dst dst_cluster --dst-git-repo $USER/tutorial qr1hi-p5p6p-9pkaxt6qjnkxhhu</span></code></pre>
-</notextile>
+++ /dev/null
----
-layout: default
-navsection: start
-title: Run your first pipeline in minutes
-...
-{% comment %}
-Copyright (C) The Arvados Authors. All rights reserved.
-
-SPDX-License-Identifier: CC-BY-SA-3.0
-{% endcomment %}
-
-h2. LobSTR v3
-
-In this quickstart guide, we'll run an existing pipeline with pre-existing data. Step-by-step instructions are shown below. You can follow along using your own local install or by using the <a href="https://playground.arvados.org/">Arvados Playground</a> (any Google account can be used to log in).
-
-(For more information about this pipeline, see our <a href="https://dev.arvados.org/projects/arvados/wiki/LobSTR_tutorial">detailed lobSTR guide</a>).
-
-<div id="carousel-firstpipe" class="carousel slide" data-interval="false">
- <!-- Indicators -->
- <ol class="carousel-indicators">
- <li data-target="#carousel-firstpipe" data-slide-to="0" class="active"></li>
- <li data-target="#carousel-firstpipe" data-slide-to="1"></li>
- <li data-target="#carousel-firstpipe" data-slide-to="2"></li>
- <li data-target="#carousel-firstpipe" data-slide-to="3"></li>
- <li data-target="#carousel-firstpipe" data-slide-to="4"></li>
- <li data-target="#carousel-firstpipe" data-slide-to="5"></li>
- <li data-target="#carousel-firstpipe" data-slide-to="6"></li>
- </ol>
-
- <!-- Wrapper for slides -->
- <div class="carousel-inner" role="listbox">
- <div class="item active">
- <img src="{{ site.baseurl }}/images/quickstart/1.png" alt="Step 1. At the dashboard, click 'Run a pipeline...'.">
- <div class="carousel-caption">
- Step 1. At the dashboard, click 'Run a pipeline...'.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/quickstart/2.png" alt="Choose 'lobstr v.3' and hit 'Next'.">
- <div class="carousel-caption">
- Choose 'lobstr v.3' and hit 'Next'.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/quickstart/3.png" alt="Rename the pipeline instance, then click 'Run'. Click 'Choose' to change the default inputs.">
- <div class="carousel-caption">
- Rename the pipeline instance, then click 'Run'. Click 'Choose' to change the default inputs.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/quickstart/4.png" alt="Here we search for and choose new inputs.">
- <div class="carousel-caption">
- Here we search for and choose new inputs.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/quickstart/5.png" alt="After the job completes, you can re-run it with one click.">
- <div class="carousel-caption">
- After the job completes, you can re-run it with one click.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/quickstart/6.png" alt="You can inspect details about the pipeline which are automatically logged.">
- <div class="carousel-caption">
- You can inspect automatically-logged details about the pipeline.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/quickstart/7.png" alt="Click 'Create sharing link' to share the output files with people outside Arvados. [END]">
- <div class="carousel-caption">
- Click 'Create sharing link' to share the output files with people outside Arvados. [END]
- </div>
- </div>
-
- </div>
-
- <!-- Controls -->
- <a class="left carousel-control" href="#carousel-firstpipe" role="button" data-slide="prev">
- <span class="glyphicon glyphicon-chevron-left" aria-hidden="true"></span>
- <span class="sr-only">Previous</span>
- </a>
- <a class="right carousel-control" href="#carousel-firstpipe" role="button" data-slide="next">
- <span class="glyphicon glyphicon-chevron-right" aria-hidden="true"></span>
- <span class="sr-only">Next</span>
- </a>
-</div>
-
-Tip: You may need to make your browser window bigger to see full-size images in the gallery above.
+++ /dev/null
----
-layout: default
-navsection: start
-title: Check out the User Guide
-...
-{% comment %}
-Copyright (C) The Arvados Authors. All rights reserved.
-
-SPDX-License-Identifier: CC-BY-SA-3.0
-{% endcomment %}
-
-Now that you've finished the Getting Started guide, check out the "User Guide":{{site.baseurl}}/user/index.html. The User Guide goes into more depth than the Getting Started guide, covers how to develop your own pipelines in addition to using pre-existing pipelines, covers the Arvados command line tools in addition to the Workbench graphical interface to Arvados, and can be referenced in any order.
+++ /dev/null
----
-layout: default
-navsection: start
-title: Visit an Arvados Public Project
-...
-{% comment %}
-Copyright (C) The Arvados Authors. All rights reserved.
-
-SPDX-License-Identifier: CC-BY-SA-3.0
-{% endcomment %}
-
-h2. <a href="https://workbench.qr1hi.arvadosapi.com/projects/qr1hi-j7d0g-662ij1pcw6bj8uj">Mason Lab - Pathomap / Ancestry Mapper (Public)</a>
-
-You can see Arvados in action by accessing the <a href="https://workbench.qr1hi.arvadosapi.com/projects/qr1hi-j7d0g-662ij1pcw6bj8uj">Mason Lab - Pathomap / Ancestry Mapper (Public) project</a>. By visiting this project, you can see what an Arvados project is, access data collections in this project, and click through a pipeline instance's contents.
-
-You will be accessing this project in read-only mode and will not be able to make any modifications such as running a new pipeline instance.
-
-<div id="carousel-publicproject" class="carousel slide" data-interval="false">
- <!-- Indicators -->
- <ol class="carousel-indicators">
- <li data-target="#carousel-publicproject" data-slide-to="0" class="active"></li>
- <li data-target="#carousel-publicproject" data-slide-to="1"></li>
- <li data-target="#carousel-publicproject" data-slide-to="2"></li>
- <li data-target="#carousel-publicproject" data-slide-to="3"></li>
- <li data-target="#carousel-publicproject" data-slide-to="4"></li>
- <li data-target="#carousel-publicproject" data-slide-to="5"></li>
- <li data-target="#carousel-publicproject" data-slide-to="6"></li>
- <li data-target="#carousel-publicproject" data-slide-to="7"></li>
- <li data-target="#carousel-publicproject" data-slide-to="8"></li>
- <li data-target="#carousel-publicproject" data-slide-to="9"></li>
- <li data-target="#carousel-publicproject" data-slide-to="10"></li>
- <li data-target="#carousel-publicproject" data-slide-to="11"></li>
- </ol>
-
- <!-- Wrapper for slides -->
- <div class="carousel-inner" role="listbox">
- <div class="item active">
- <img src="{{ site.baseurl }}/images/publicproject/description.png" alt="Step 1. The project's first tab, *Description*, describes what this project is all about.">
- <div class="carousel-caption">
- Step 1. The project's first tab, *Description*, describes what this project is all about.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/collections.png" alt="The *Data collections* tab contains the various pipeline inputs, logs, and outputs.">
- <div class="carousel-caption">
- The *Data collections* tab contains the various pipeline inputs, logs, and outputs.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/instances.png" alt="You can see the jobs and pipelines in this project by accessing the *Jobs and pipelines* tab.">
- <div class="carousel-caption">
- You can see the jobs and pipelines in this project by accessing the *Jobs and pipelines* tab.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/collection-show.png" alt="In the *Data collections* tab, click on the *Show* icon to the left of a collection to see the collection contents.">
- <div class="carousel-caption">
- In the *Data collections* tab, click on the *Show* icon to the left of a collection to see the collection contents.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/collection-files.png" alt="The collection page lists the details about it. The *Files* tab can be used to view and download individual files in it.">
- <div class="carousel-caption">
- The collection page lists the details about it. The *Files* tab can be used to view and download individual files in it.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/collection-graph.png" alt="The collection *Provenance graph* tab gives a visual representation of this collection's provenance.">
- <div class="carousel-caption">
- The collection *Provenance graph* tab gives a visual representation of this collection's provenance.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/instance-show.png" alt="In the project *Jobs and pipelines* tab, click on the *Show* icon to the left of a pipeline to access the pipeline contents.">
- <div class="carousel-caption">
- In the project *Jobs and pipelines* tab, click on the *Show* icon to the left of a pipeline to access the pipeline contents.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/instance-components.png" alt="The pipeline *Components* tab details the various jobs in it and how long it took to run it.">
- <div class="carousel-caption">
- The pipeline *Components* tab details the various jobs in it and how long it took to run it.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/instance-job.png" alt="Click on the down arrow in one of the job rows to see the job details. You can also click on the job's output.">
- <div class="carousel-caption">
- Click on the down arrow <i class="fa fa-lg fa-fw fa-caret-down"></i> in one of the job rows to see the job details. You can also click on the job's output.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/instance-log.png" alt="The *Log* tab can be used to see the log for the pipeline instance.">
- <div class="carousel-caption">
- The *Log* tab can be used to see the log for the pipeline instance.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/instance-graph.png" alt="The *Graph* tab provides a visual representation of the pipeline run.">
- <div class="carousel-caption">
- The *Graph* tab provides a visual representation of the pipeline run.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/publicproject/instance-advanced.png" alt="The *Advanced* tab can be used to access metadata about the pipeline. [END]">
- <div class="carousel-caption">
- The *Advanced* tab can be used to access metadata about the pipeline. [END]
- </div>
- </div>
- </div>
-
- <!-- Controls -->
- <a class="left carousel-control" href="#carousel-publicproject" role="button" data-slide="prev">
- <span class="glyphicon glyphicon-chevron-left" aria-hidden="true"></span>
- <span class="sr-only">Previous</span>
- </a>
- <a class="right carousel-control" href="#carousel-publicproject" role="button" data-slide="next">
- <span class="glyphicon glyphicon-chevron-right" aria-hidden="true"></span>
- <span class="sr-only">Next</span>
- </a>
-</div>
-
-Tip: You may need to make your browser window bigger to see full-size images in the gallery above.
+++ /dev/null
----
-layout: default
-navsection: start
-title: Sharing Data
-...
-{% comment %}
-Copyright (C) The Arvados Authors. All rights reserved.
-
-SPDX-License-Identifier: CC-BY-SA-3.0
-{% endcomment %}
-
-You can easily share data entirely through Workbench, the web interface to Arvados.
-
-h2. Upload and share your existing data
-
-Step-by-step instructions are shown below.
-
-<div id="carousel-sharedata" class="carousel slide" data-interval="false">
- <!-- Indicators -->
- <ol class="carousel-indicators">
- <li data-target="#carousel-sharedata" data-slide-to="0" class="active"></li>
- <li data-target="#carousel-sharedata" data-slide-to="1"></li>
- <li data-target="#carousel-sharedata" data-slide-to="2"></li>
- <li data-target="#carousel-sharedata" data-slide-to="3"></li>
- <li data-target="#carousel-sharedata" data-slide-to="4"></li>
- <li data-target="#carousel-sharedata" data-slide-to="5"></li>
- <li data-target="#carousel-sharedata" data-slide-to="6"></li>
- <li data-target="#carousel-sharedata" data-slide-to="7"></li>
- </ol>
-
- <!-- Wrapper for slides -->
- <div class="carousel-inner" role="listbox">
- <div class="item active">
- <img src="{{ site.baseurl }}/images/uses/gotohome.png" alt="Step 1. From the dashboard, go to your Home project.">
- <div class="carousel-caption">
- Step 1. From the dashboard, go to your Home project.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/uses/uploaddata.png" alt="Click 'Add data' → 'Upload files'.">
- <div class="carousel-caption">
- Click 'Add data' → 'Upload files'.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/uses/choosefiles.png" alt="A new collection is created automatically. Choose files to upload and hit Start.">
- <div class="carousel-caption">
- A new collection is created automatically. Choose files to upload and hit Start.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/uses/uploading.png" alt="Files will upload and stay uploaded even if the browser is closed.">
- <div class="carousel-caption">
- Files will upload and stay uploaded even if the browser is closed.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/uses/rename.png" alt="Rename the collection appropriately.">
- <div class="carousel-caption">
- Rename the collection appropriately.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/uses/sharing.png" alt="Click 'Create sharing link'. You can click 'unshare' at any later point.">
- <div class="carousel-caption">
- Click 'Create sharing link'. You can click 'Unshare' at any later point.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/uses/shared.png" alt="Now just share this link with anyone you want.">
- <div class="carousel-caption">
- Now just share this link with anyone you want.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/uses/sharedsubdirs.png" alt="Here's a more complex collection. [END]">
- <div class="carousel-caption">
- Here's a more complex collection. [END]
- </div>
- </div>
-
- </div>
-
- <!-- Controls -->
- <a class="left carousel-control" href="#carousel-sharedata" role="button" data-slide="prev">
- <span class="glyphicon glyphicon-chevron-left" aria-hidden="true"></span>
- <span class="sr-only">Previous</span>
- </a>
- <a class="right carousel-control" href="#carousel-sharedata" role="button" data-slide="next">
- <span class="glyphicon glyphicon-chevron-right" aria-hidden="true"></span>
- <span class="sr-only">Next</span>
- </a>
-</div>
-
-Tip: You may need to make your browser window bigger to see full-size images in the gallery above.
+++ /dev/null
----
-layout: default
-navsection: start
-title: Welcome to Arvados!
-...
-{% comment %}
-Copyright (C) The Arvados Authors. All rights reserved.
-
-SPDX-License-Identifier: CC-BY-SA-3.0
-{% endcomment %}
-
-This guide provides an introduction to using Arvados to solve big data bioinformatics problems.
-
-h2. What is Arvados?
-
-Arvados is a free and open source bioinformatics platform for genomic and biomedical data.
-
-We address the needs of IT directors, lab principals, and bioinformaticians.
-
-h2. Why use Arvados?
-
-Arvados enables you to quickly begin using cloud computing resources in your bioinformatics work. It allows you to track your methods and datasets, share them securely, and easily re-run analyses.
-
-h3. Take a look (Screenshots gallery)
-
-<div id="carousel-keyfeatures" class="carousel slide" data-interval="false">
- <!-- Indicators -->
- <ol class="carousel-indicators">
- <li data-target="#carousel-keyfeatures" data-slide-to="0" class="active"></li>
- <li data-target="#carousel-keyfeatures" data-slide-to="1"></li>
- <li data-target="#carousel-keyfeatures" data-slide-to="2"></li>
- <li data-target="#carousel-keyfeatures" data-slide-to="3"></li>
- <li data-target="#carousel-keyfeatures" data-slide-to="4"></li>
- <li data-target="#carousel-keyfeatures" data-slide-to="5"></li>
- <li data-target="#carousel-keyfeatures" data-slide-to="6"></li>
- <li data-target="#carousel-keyfeatures" data-slide-to="7"></li>
- <li data-target="#carousel-keyfeatures" data-slide-to="8"></li>
- </ol>
-
- <!-- Wrapper for slides -->
- <div class="carousel-inner" role="listbox">
- <div class="item active">
- <img src="{{ site.baseurl }}/images/keyfeatures/dashboard2.png" alt="[START] After logging in, you will see Workbench's dashboard.">
- <div class="carousel-caption">
- [START] After logging in, you will see Workbench's dashboard.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/keyfeatures/running2.png" alt="Pipelines describe a set of computational tasks (jobs).">
- <div class="carousel-caption">
- Pipelines describe a set of computational tasks (jobs).
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/keyfeatures/log.png" alt="The output of all jobs is logged and stored automatically.">
- <div class="carousel-caption">
- The output of all jobs is logged and stored automatically.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/keyfeatures/graph.png" alt="Pipelines can also be viewed in auto-generated graph form.">
- <div class="carousel-caption">
- Pipelines can also be viewed in auto-generated graph form.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/keyfeatures/rerun.png" alt="Pipelines can easily be re-run exactly as before, or...">
- <div class="carousel-caption">
- Pipelines can easily be re-run exactly as before, or...
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/keyfeatures/chooseinputs.png" alt="...you can change parameters or pick new datasets.">
- <div class="carousel-caption">
- ...you can change parameters or pick new datasets.
- </div>
- </div>
-
- <div class="item">
- <img src="{{ site.baseurl }}/images/keyfeatures/webupload.png" alt="With web upload, data can be uploaded right in Workbench.">
- <div class="carousel-caption">
- With web upload, data can be uploaded right in Workbench.
- </div>
- </div>
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- <div class="item">
- <img src="{{ site.baseurl }}/images/keyfeatures/collectionpage.png" alt="Collections allow sharing datasets and job outputs easily. 'Create sharing link' with one click.">
- <div class="carousel-caption">
- Collections allow sharing datasets and job outputs easily. 'Create sharing link' with one click.
- </div>
- </div>
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- <div class="item">
- <img src="{{ site.baseurl }}/images/keyfeatures/provenance.png" alt="Data provenance is tracked automatically. [END]">
- <div class="carousel-caption">
- Data provenance is tracked automatically. [END]
- </div>
- </div>
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-
- </div>
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- <!-- Controls -->
- <a class="left carousel-control" href="#carousel-keyfeatures" role="button" data-slide="prev">
- <span class="glyphicon glyphicon-chevron-left" aria-hidden="true"></span>
- <span class="sr-only">Previous</span>
- </a>
- <a class="right carousel-control" href="#carousel-keyfeatures" role="button" data-slide="next">
- <span class="glyphicon glyphicon-chevron-right" aria-hidden="true"></span>
- <span class="sr-only">Next</span>
- </a>
-</div>
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-Note: Workbench is the web interface to Arvados.
-Tip: You may need to make your browser window bigger to see full-size images in the gallery above.
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-h3. Key Features
-
-<ul>
-<li><strong>Track your methods</strong><br/>
-We log every compute job: software versions, machine images, input and output data hashes. Rely on a computer, not your memory and your note-taking skills.<br/><br/></li>
-<li><strong>Share your methods</strong><br/>
-Show other people what you did. Let them use your workflow on their own data. Publish a permalink to your methods and data, so others can reproduce and build on them easily.<br/><br/></li>
-<li><strong>Track data origin</strong><br/>
-Did you really only use fully consented public data in this analysis?<br/><br/></li>
-<li><strong>Get results sooner</strong><br/>
-Run your compute jobs faster by using multi-nodes and multi-cores, even if your programs are single-threaded.<br/><br/></li>
-</ul>
projects / arvados.git / commitdiff