Removed numbering and put navorder for tutorial 2 at 102 to hide it.

diff --git a/doc/user/tutorial-firstscript.textile b/doc/user/tutorial-firstscript.textile
index efdb99d5371813bab05cadd31359b99f8d193016..ab0179876748183e94505dcbb9a36e7982d4f417 100644 (file)
--- a/doc/user/tutorial-firstscript.textile
+++ b/doc/user/tutorial-firstscript.textile
@@ -1,8 +1,8 @@
 ---
 layout: default
 navsection: userguide
-title: "Tutorial 2: Writing a Crunch script"
-navorder: 12
+title: "Tutorial: Writing a Crunch script"
+navorder: 102
 ---
 
 {% include alert-stub.html %}

diff --git a/doc/user/tutorial-gatk-variantfiltration.textile b/doc/user/tutorial-gatk-variantfiltration.textile
index 8168f0da66882af85ab0ac9654c7ad0a0aa6bbc3..e6ceeb892b7fdd02976e0188ac77aac9c2c20f69 100644 (file)
--- a/doc/user/tutorial-gatk-variantfiltration.textile
+++ b/doc/user/tutorial-gatk-variantfiltration.textile
@@ -1,11 +1,11 @@
 ---
 layout: default
 navsection: userguide
-title: "Tutorial 6: GATK VariantFiltration"
+title: "Tutorial: GATK VariantFiltration"
 navorder: 16
 ---
 
-h1. Tutorial 6: GATK VariantFiltration
+h1. Tutorial: GATK VariantFiltration
 
 Here you will use the GATK VariantFiltration program to assign pass/fail scores to variants in a VCF file.
 

diff --git a/doc/user/tutorial-job-debug.textile b/doc/user/tutorial-job-debug.textile
index 3d5c491df5cf3676b56e8a6d50a4e1f51ca914e9..2380bc0a94f4c841147428583dbce98218e1ec86 100644 (file)
--- a/doc/user/tutorial-job-debug.textile
+++ b/doc/user/tutorial-job-debug.textile
@@ -1,11 +1,11 @@
 ---
 layout: default
 navsection: userguide
-title: "Tutorial 3: Debug a crunch script"
+title: "Tutorial: Debug a crunch script"
 navorder: 13
 ---
 
-h1. Tutorial 3: Debug a crunch script
+h1. Tutorial: Debug a crunch script
 
 The commit-push-submit cycle is too slow for developing and debugging crunch scripts.
 

diff --git a/doc/user/tutorial-job1.textile b/doc/user/tutorial-job1.textile
index 866f1dd6d1c3d7e66527a65cb712e6fd09838d80..aa0c4e2f78652ee75c35aa50f6ae1c6392c6bd03 100644 (file)
--- a/doc/user/tutorial-job1.textile
+++ b/doc/user/tutorial-job1.textile
@@ -1,11 +1,11 @@
 ---
 layout: default
 navsection: userguide
-title: "Tutorial 1: Introduction to Keep and your first Crunch job"
+title: "Tutorial: Introduction to Keep and your first Crunch job"
 navorder: 11
 ---
 
-h1. Tutorial 1: Introduction to Keep and your first crunch job
+h1. Tutorial: Introduction to Keep and your first crunch job
 
 This tutorial introduces the concepts and use of the Arvados Keep storage and Crunch job system using the @arv@ command line tool and Arvados Workbench.
 
@@ -276,4 +276,5 @@ $ arv keep get 880b55fb4470b148a447ff38cacdd952+54+K@qr1hi/md5sum.txt
 
 This md5 hash matches the md5 hash which we computed earlier.
 
-This concludes the first tutorial.  In the next tutorial, "we will inspect how the hash script works.":tutorial-firstscript.html
+This concludes the first tutorial.  
+<!-- In the next tutorial, we will inspect how the hash script works. -->

diff --git a/doc/user/tutorial-new-pipeline.textile b/doc/user/tutorial-new-pipeline.textile
index 978145064c68f47c191b4b75e8c3a874642daf0f..b80c16ae3aa61b7a7a0d50228f07d9aa3a9ba8f5 100644 (file)
--- a/doc/user/tutorial-new-pipeline.textile
+++ b/doc/user/tutorial-new-pipeline.textile
@@ -1,11 +1,11 @@
 ---
 layout: default
 navsection: userguide
-title: "Tutorial 5: Construct a new pipeline"
+title: "Tutorial: Construct a new pipeline"
 navorder: 15
 ---
 
-h1. Tutorial 5: Construct a new pipeline
+h1. Tutorial: Construct a new pipeline
 
 Here you will write two new crunch scripts, incorporate them into a new pipeline template, run the new pipeline a couple of times using different parameters, and compare the results. One of the new scripts will use the Arvados API to look up trait→human→data relations and use this information to compile a collection of data to analyze.
 

diff --git a/doc/user/tutorial-trait-search.textile b/doc/user/tutorial-trait-search.textile
index a9a7545a016feee3a1b80c83116085a644afbb6e..a2e243e4d69901014c90b4faa547e7312202ab43 100644 (file)
--- a/doc/user/tutorial-trait-search.textile
+++ b/doc/user/tutorial-trait-search.textile
@@ -1,11 +1,11 @@
 ---
 layout: default
 navsection: userguide
-title: "Tutorial 4: Search PGP data by trait"
+title: "Tutorial: Search PGP data by trait"
 navorder: 14
 ---
 
-h1. Tutorial 4: Search PGP data by trait
+h1. Tutorial: Search PGP data by trait
 
 Here you will use the Python SDK to find public WGS data for people who have a certain medical condition.