+#' users.get is a method defined in Arvados class.
+#'
+#' @usage arv$users.get(uuid)
+#' @param uuid The UUID of the User in question.
+#' @return User object.
+#' @name users.get
+NULL
+
+#' users.index is a method defined in Arvados class.
+#'
+#' @usage arv$users.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return UserList object.
+#' @name users.index
+NULL
+
+#' users.create is a method defined in Arvados class.
+#'
+#' @usage arv$users.create(user, ensure_unique_name = "false")
+#' @param user User object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return User object.
+#' @name users.create
+NULL
+
+#' users.update is a method defined in Arvados class.
+#'
+#' @usage arv$users.update(user, uuid)
+#' @param user User object.
+#' @param uuid The UUID of the User in question.
+#' @return User object.
+#' @name users.update
+NULL
+
+#' users.delete is a method defined in Arvados class.
+#'
+#' @usage arv$users.delete(uuid)
+#' @param uuid The UUID of the User in question.
+#' @return User object.
+#' @name users.delete
+NULL
+
+#' users.current is a method defined in Arvados class.
+#'
+#' @usage arv$users.current(NULL)
+#' @return User object.
+#' @name users.current
+NULL
+
+#' users.system is a method defined in Arvados class.
+#'
+#' @usage arv$users.system(NULL)
+#' @return User object.
+#' @name users.system
+NULL
+
+#' users.activate is a method defined in Arvados class.
+#'
+#' @usage arv$users.activate(uuid)
+#' @param uuid
+#' @return User object.
+#' @name users.activate
+NULL
+
+#' users.setup is a method defined in Arvados class.
+#'
+#' @usage arv$users.setup(user = NULL, openid_prefix = NULL,
+#' repo_name = NULL, vm_uuid = NULL, send_notification_email = "false")
+#' @param user
+#' @param openid_prefix
+#' @param repo_name
+#' @param vm_uuid
+#' @param send_notification_email
+#' @return User object.
+#' @name users.setup
+NULL
+
+#' users.unsetup is a method defined in Arvados class.
+#'
+#' @usage arv$users.unsetup(uuid)
+#' @param uuid
+#' @return User object.
+#' @name users.unsetup
+NULL
+
+#' users.update_uuid is a method defined in Arvados class.
+#'
+#' @usage arv$users.update_uuid(uuid, new_uuid)
+#' @param uuid
+#' @param new_uuid
+#' @return User object.
+#' @name users.update_uuid
+NULL
+
+#' users.list is a method defined in Arvados class.
+#'
+#' @usage arv$users.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return UserList object.
+#' @name users.list
+NULL
+
+#' users.show is a method defined in Arvados class.
+#'
+#' @usage arv$users.show(uuid)
+#' @param uuid
+#' @return User object.
+#' @name users.show
+NULL
+
+#' users.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$users.destroy(uuid)
+#' @param uuid
+#' @return User object.
+#' @name users.destroy
+NULL
+
+#' api_client_authorizations.get is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.get(uuid)
+#' @param uuid The UUID of the ApiClientAuthorization in question.
+#' @return ApiClientAuthorization object.
+#' @name api_client_authorizations.get
+NULL
+
+#' api_client_authorizations.index is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return ApiClientAuthorizationList object.
+#' @name api_client_authorizations.index
+NULL
+
+#' api_client_authorizations.create is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.create(api_client_authorization,
+#' ensure_unique_name = "false")
+#' @param apiClientAuthorization ApiClientAuthorization object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return ApiClientAuthorization object.
+#' @name api_client_authorizations.create
+NULL
+
+#' api_client_authorizations.update is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.update(api_client_authorization,
+#' uuid)
+#' @param apiClientAuthorization ApiClientAuthorization object.
+#' @param uuid The UUID of the ApiClientAuthorization in question.
+#' @return ApiClientAuthorization object.
+#' @name api_client_authorizations.update
+NULL
+
+#' api_client_authorizations.delete is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.delete(uuid)
+#' @param uuid The UUID of the ApiClientAuthorization in question.
+#' @return ApiClientAuthorization object.
+#' @name api_client_authorizations.delete
+NULL
+
+#' api_client_authorizations.create_system_auth is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.create_system_auth(api_client_id = NULL,
+#' scopes = NULL)
+#' @param api_client_id
+#' @param scopes
+#' @return ApiClientAuthorization object.
+#' @name api_client_authorizations.create_system_auth
+NULL
+
+#' api_client_authorizations.current is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.current(NULL)
+#' @return ApiClientAuthorization object.
+#' @name api_client_authorizations.current
+NULL
+
+#' api_client_authorizations.list is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return ApiClientAuthorizationList object.
+#' @name api_client_authorizations.list
+NULL
+
+#' api_client_authorizations.show is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.show(uuid)
+#' @param uuid
+#' @return ApiClientAuthorization object.
+#' @name api_client_authorizations.show
+NULL
+
+#' api_client_authorizations.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$api_client_authorizations.destroy(uuid)
+#' @param uuid
+#' @return ApiClientAuthorization object.
+#' @name api_client_authorizations.destroy
+NULL
+
+#' api_clients.get is a method defined in Arvados class.
+#'
+#' @usage arv$api_clients.get(uuid)
+#' @param uuid The UUID of the ApiClient in question.
+#' @return ApiClient object.
+#' @name api_clients.get
+NULL
+
+#' api_clients.index is a method defined in Arvados class.
+#'
+#' @usage arv$api_clients.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return ApiClientList object.
+#' @name api_clients.index
+NULL
+
+#' api_clients.create is a method defined in Arvados class.
+#'
+#' @usage arv$api_clients.create(api_client,
+#' ensure_unique_name = "false")
+#' @param apiClient ApiClient object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return ApiClient object.
+#' @name api_clients.create
+NULL
+
+#' api_clients.update is a method defined in Arvados class.
+#'
+#' @usage arv$api_clients.update(api_client,
+#' uuid)
+#' @param apiClient ApiClient object.
+#' @param uuid The UUID of the ApiClient in question.
+#' @return ApiClient object.
+#' @name api_clients.update
+NULL
+
+#' api_clients.delete is a method defined in Arvados class.
+#'
+#' @usage arv$api_clients.delete(uuid)
+#' @param uuid The UUID of the ApiClient in question.
+#' @return ApiClient object.
+#' @name api_clients.delete
+NULL
+
+#' api_clients.list is a method defined in Arvados class.
+#'
+#' @usage arv$api_clients.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return ApiClientList object.
+#' @name api_clients.list
+NULL
+
+#' api_clients.show is a method defined in Arvados class.
+#'
+#' @usage arv$api_clients.show(uuid)
+#' @param uuid
+#' @return ApiClient object.
+#' @name api_clients.show
+NULL
+
+#' api_clients.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$api_clients.destroy(uuid)
+#' @param uuid
+#' @return ApiClient object.
+#' @name api_clients.destroy
+NULL
+
+#' container_requests.get is a method defined in Arvados class.
+#'
+#' @usage arv$container_requests.get(uuid)
+#' @param uuid The UUID of the ContainerRequest in question.
+#' @return ContainerRequest object.
+#' @name container_requests.get
+NULL
+
+#' container_requests.index is a method defined in Arvados class.
+#'
+#' @usage arv$container_requests.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return ContainerRequestList object.
+#' @name container_requests.index
+NULL
+
+#' container_requests.create is a method defined in Arvados class.
+#'
+#' @usage arv$container_requests.create(container_request,
+#' ensure_unique_name = "false")
+#' @param containerRequest ContainerRequest object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return ContainerRequest object.
+#' @name container_requests.create
+NULL
+
+#' container_requests.update is a method defined in Arvados class.
+#'
+#' @usage arv$container_requests.update(container_request,
+#' uuid)
+#' @param containerRequest ContainerRequest object.
+#' @param uuid The UUID of the ContainerRequest in question.
+#' @return ContainerRequest object.
+#' @name container_requests.update
+NULL
+
+#' container_requests.delete is a method defined in Arvados class.
+#'
+#' @usage arv$container_requests.delete(uuid)
+#' @param uuid The UUID of the ContainerRequest in question.
+#' @return ContainerRequest object.
+#' @name container_requests.delete
+NULL
+
+#' container_requests.list is a method defined in Arvados class.
+#'
+#' @usage arv$container_requests.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return ContainerRequestList object.
+#' @name container_requests.list
+NULL
+
+#' container_requests.show is a method defined in Arvados class.
+#'
+#' @usage arv$container_requests.show(uuid)
+#' @param uuid
+#' @return ContainerRequest object.
+#' @name container_requests.show
+NULL
+
+#' container_requests.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$container_requests.destroy(uuid)
+#' @param uuid
+#' @return ContainerRequest object.
+#' @name container_requests.destroy
+NULL
+
+#' authorized_keys.get is a method defined in Arvados class.
+#'
+#' @usage arv$authorized_keys.get(uuid)
+#' @param uuid The UUID of the AuthorizedKey in question.
+#' @return AuthorizedKey object.
+#' @name authorized_keys.get
+NULL
+
+#' authorized_keys.index is a method defined in Arvados class.
+#'
+#' @usage arv$authorized_keys.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return AuthorizedKeyList object.
+#' @name authorized_keys.index
+NULL
+
+#' authorized_keys.create is a method defined in Arvados class.
+#'
+#' @usage arv$authorized_keys.create(authorized_key,
+#' ensure_unique_name = "false")
+#' @param authorizedKey AuthorizedKey object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return AuthorizedKey object.
+#' @name authorized_keys.create
+NULL
+
+#' authorized_keys.update is a method defined in Arvados class.
+#'
+#' @usage arv$authorized_keys.update(authorized_key,
+#' uuid)
+#' @param authorizedKey AuthorizedKey object.
+#' @param uuid The UUID of the AuthorizedKey in question.
+#' @return AuthorizedKey object.
+#' @name authorized_keys.update
+NULL
+
+#' authorized_keys.delete is a method defined in Arvados class.
+#'
+#' @usage arv$authorized_keys.delete(uuid)
+#' @param uuid The UUID of the AuthorizedKey in question.
+#' @return AuthorizedKey object.
+#' @name authorized_keys.delete
+NULL
+
+#' authorized_keys.list is a method defined in Arvados class.
+#'
+#' @usage arv$authorized_keys.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return AuthorizedKeyList object.
+#' @name authorized_keys.list
+NULL
+
+#' authorized_keys.show is a method defined in Arvados class.
+#'
+#' @usage arv$authorized_keys.show(uuid)
+#' @param uuid
+#' @return AuthorizedKey object.
+#' @name authorized_keys.show
+NULL
+
+#' authorized_keys.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$authorized_keys.destroy(uuid)
+#' @param uuid
+#' @return AuthorizedKey object.
+#' @name authorized_keys.destroy
+NULL
+
+#' collections.get is a method defined in Arvados class.
+#'
+#' @usage arv$collections.get(uuid)
+#' @param uuid The UUID of the Collection in question.
+#' @return Collection object.
+#' @name collections.get
+NULL
+
+#' collections.index is a method defined in Arvados class.
+#'
+#' @usage arv$collections.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact", include_trash = NULL)
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @param include_trash Include collections whose is_trashed attribute is true.
+#' @return CollectionList object.
+#' @name collections.index
+NULL
+
+#' collections.create is a method defined in Arvados class.
+#'
+#' @usage arv$collections.create(collection,
+#' ensure_unique_name = "false")
+#' @param collection Collection object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Collection object.
+#' @name collections.create
+NULL
+
+#' collections.update is a method defined in Arvados class.
+#'
+#' @usage arv$collections.update(collection,
+#' uuid)
+#' @param collection Collection object.
+#' @param uuid The UUID of the Collection in question.
+#' @return Collection object.
+#' @name collections.update
+NULL
+
+#' collections.delete is a method defined in Arvados class.
+#'
+#' @usage arv$collections.delete(uuid)
+#' @param uuid The UUID of the Collection in question.
+#' @return Collection object.
+#' @name collections.delete
+NULL
+
+#' collections.provenance is a method defined in Arvados class.
+#'
+#' @usage arv$collections.provenance(uuid)
+#' @param uuid
+#' @return Collection object.
+#' @name collections.provenance
+NULL
+
+#' collections.used_by is a method defined in Arvados class.
+#'
+#' @usage arv$collections.used_by(uuid)
+#' @param uuid
+#' @return Collection object.
+#' @name collections.used_by
+NULL
+
+#' collections.trash is a method defined in Arvados class.
+#'
+#' @usage arv$collections.trash(uuid)
+#' @param uuid
+#' @return Collection object.
+#' @name collections.trash
+NULL
+
+#' collections.untrash is a method defined in Arvados class.
+#'
+#' @usage arv$collections.untrash(uuid)
+#' @param uuid
+#' @return Collection object.
+#' @name collections.untrash
+NULL
+
+#' collections.list is a method defined in Arvados class.
+#'
+#' @usage arv$collections.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact", include_trash = NULL)
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @param include_trash Include collections whose is_trashed attribute is true.
+#' @return CollectionList object.
+#' @name collections.list
+NULL
+
+#' collections.show is a method defined in Arvados class.
+#'
+#' @usage arv$collections.show(uuid)
+#' @param uuid
+#' @return Collection object.
+#' @name collections.show
+NULL
+
+#' collections.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$collections.destroy(uuid)
+#' @param uuid
+#' @return Collection object.
+#' @name collections.destroy
+NULL
+
+#' containers.get is a method defined in Arvados class.
+#'
+#' @usage arv$containers.get(uuid)
+#' @param uuid The UUID of the Container in question.
+#' @return Container object.
+#' @name containers.get
+NULL
+
+#' containers.index is a method defined in Arvados class.
+#'
+#' @usage arv$containers.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return ContainerList object.
+#' @name containers.index
+NULL
+
+#' containers.create is a method defined in Arvados class.
+#'
+#' @usage arv$containers.create(container,
+#' ensure_unique_name = "false")
+#' @param container Container object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Container object.
+#' @name containers.create
+NULL
+
+#' containers.update is a method defined in Arvados class.
+#'
+#' @usage arv$containers.update(container,
+#' uuid)
+#' @param container Container object.
+#' @param uuid The UUID of the Container in question.
+#' @return Container object.
+#' @name containers.update
+NULL
+
+#' containers.delete is a method defined in Arvados class.
+#'
+#' @usage arv$containers.delete(uuid)
+#' @param uuid The UUID of the Container in question.
+#' @return Container object.
+#' @name containers.delete
+NULL
+
+#' containers.auth is a method defined in Arvados class.
+#'
+#' @usage arv$containers.auth(uuid)
+#' @param uuid
+#' @return Container object.
+#' @name containers.auth
+NULL
+
+#' containers.lock is a method defined in Arvados class.
+#'
+#' @usage arv$containers.lock(uuid)
+#' @param uuid
+#' @return Container object.
+#' @name containers.lock
+NULL
+
+#' containers.unlock is a method defined in Arvados class.
+#'
+#' @usage arv$containers.unlock(uuid)
+#' @param uuid
+#' @return Container object.
+#' @name containers.unlock
+NULL
+
+#' containers.current is a method defined in Arvados class.
+#'
+#' @usage arv$containers.current(NULL)
+#' @return Container object.
+#' @name containers.current
+NULL
+
+#' containers.list is a method defined in Arvados class.
+#'
+#' @usage arv$containers.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return ContainerList object.
+#' @name containers.list
+NULL
+
+#' containers.show is a method defined in Arvados class.
+#'
+#' @usage arv$containers.show(uuid)
+#' @param uuid
+#' @return Container object.
+#' @name containers.show
+NULL
+
+#' containers.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$containers.destroy(uuid)
+#' @param uuid
+#' @return Container object.
+#' @name containers.destroy
+NULL
+
+#' humans.get is a method defined in Arvados class.
+#'
+#' @usage arv$humans.get(uuid)
+#' @param uuid The UUID of the Human in question.
+#' @return Human object.
+#' @name humans.get
+NULL
+
+#' humans.index is a method defined in Arvados class.
+#'
+#' @usage arv$humans.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return HumanList object.
+#' @name humans.index
+NULL
+
+#' humans.create is a method defined in Arvados class.
+#'
+#' @usage arv$humans.create(human, ensure_unique_name = "false")
+#' @param human Human object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Human object.
+#' @name humans.create
+NULL
+
+#' humans.update is a method defined in Arvados class.
+#'
+#' @usage arv$humans.update(human, uuid)
+#' @param human Human object.
+#' @param uuid The UUID of the Human in question.
+#' @return Human object.
+#' @name humans.update
+NULL
+
+#' humans.delete is a method defined in Arvados class.
+#'
+#' @usage arv$humans.delete(uuid)
+#' @param uuid The UUID of the Human in question.
+#' @return Human object.
+#' @name humans.delete
+NULL
+
+#' humans.list is a method defined in Arvados class.
+#'
+#' @usage arv$humans.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return HumanList object.
+#' @name humans.list
+NULL
+
+#' humans.show is a method defined in Arvados class.
+#'
+#' @usage arv$humans.show(uuid)
+#' @param uuid
+#' @return Human object.
+#' @name humans.show
+NULL
+
+#' humans.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$humans.destroy(uuid)
+#' @param uuid
+#' @return Human object.
+#' @name humans.destroy
+NULL
+
+#' job_tasks.get is a method defined in Arvados class.
+#'
+#' @usage arv$job_tasks.get(uuid)
+#' @param uuid The UUID of the JobTask in question.
+#' @return JobTask object.
+#' @name job_tasks.get
+NULL
+
+#' job_tasks.index is a method defined in Arvados class.
+#'
+#' @usage arv$job_tasks.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return JobTaskList object.
+#' @name job_tasks.index
+NULL
+
+#' job_tasks.create is a method defined in Arvados class.
+#'
+#' @usage arv$job_tasks.create(job_task,
+#' ensure_unique_name = "false")
+#' @param jobTask JobTask object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return JobTask object.
+#' @name job_tasks.create
+NULL
+
+#' job_tasks.update is a method defined in Arvados class.
+#'
+#' @usage arv$job_tasks.update(job_task,
+#' uuid)
+#' @param jobTask JobTask object.
+#' @param uuid The UUID of the JobTask in question.
+#' @return JobTask object.
+#' @name job_tasks.update
+NULL
+
+#' job_tasks.delete is a method defined in Arvados class.
+#'
+#' @usage arv$job_tasks.delete(uuid)
+#' @param uuid The UUID of the JobTask in question.
+#' @return JobTask object.
+#' @name job_tasks.delete
+NULL
+
+#' job_tasks.list is a method defined in Arvados class.
+#'
+#' @usage arv$job_tasks.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return JobTaskList object.
+#' @name job_tasks.list
+NULL
+
+#' job_tasks.show is a method defined in Arvados class.
+#'
+#' @usage arv$job_tasks.show(uuid)
+#' @param uuid
+#' @return JobTask object.
+#' @name job_tasks.show
+NULL
+
+#' job_tasks.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$job_tasks.destroy(uuid)
+#' @param uuid
+#' @return JobTask object.
+#' @name job_tasks.destroy
+NULL
+
+#' links.get is a method defined in Arvados class.
+#'
+#' @usage arv$links.get(uuid)
+#' @param uuid The UUID of the Link in question.
+#' @return Link object.
+#' @name links.get
+NULL
+
+#' links.index is a method defined in Arvados class.
+#'
+#' @usage arv$links.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return LinkList object.
+#' @name links.index
+NULL
+
+#' links.create is a method defined in Arvados class.
+#'
+#' @usage arv$links.create(link, ensure_unique_name = "false")
+#' @param link Link object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Link object.
+#' @name links.create
+NULL
+
+#' links.update is a method defined in Arvados class.
+#'
+#' @usage arv$links.update(link, uuid)
+#' @param link Link object.
+#' @param uuid The UUID of the Link in question.
+#' @return Link object.
+#' @name links.update
+NULL
+
+#' links.delete is a method defined in Arvados class.
+#'
+#' @usage arv$links.delete(uuid)
+#' @param uuid The UUID of the Link in question.
+#' @return Link object.
+#' @name links.delete
+NULL
+
+#' links.list is a method defined in Arvados class.
+#'
+#' @usage arv$links.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return LinkList object.
+#' @name links.list
+NULL
+
+#' links.show is a method defined in Arvados class.
+#'
+#' @usage arv$links.show(uuid)
+#' @param uuid
+#' @return Link object.
+#' @name links.show
+NULL
+
+#' links.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$links.destroy(uuid)
+#' @param uuid
+#' @return Link object.
+#' @name links.destroy
+NULL
+
+#' links.get_permissions is a method defined in Arvados class.
+#'
+#' @usage arv$links.get_permissions(uuid)
+#' @param uuid
+#' @return Link object.
+#' @name links.get_permissions
+NULL
+
+#' jobs.get is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.get(uuid)
+#' @param uuid The UUID of the Job in question.
+#' @return Job object.
+#' @name jobs.get
+NULL
+
+#' jobs.index is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return JobList object.
+#' @name jobs.index
+NULL
+
+#' jobs.create is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.create(job, ensure_unique_name = "false",
+#' find_or_create = "false", filters = NULL,
+#' minimum_script_version = NULL, exclude_script_versions = NULL)
+#' @param job Job object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @param find_or_create
+#' @param filters
+#' @param minimum_script_version
+#' @param exclude_script_versions
+#' @return Job object.
+#' @name jobs.create
+NULL
+
+#' jobs.update is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.update(job, uuid)
+#' @param job Job object.
+#' @param uuid The UUID of the Job in question.
+#' @return Job object.
+#' @name jobs.update
+NULL
+
+#' jobs.delete is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.delete(uuid)
+#' @param uuid The UUID of the Job in question.
+#' @return Job object.
+#' @name jobs.delete
+NULL
+
+#' jobs.queue is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.queue(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return Job object.
+#' @name jobs.queue
+NULL
+
+#' jobs.queue_size is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.queue_size(NULL)
+#' @return Job object.
+#' @name jobs.queue_size
+NULL
+
+#' jobs.cancel is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.cancel(uuid)
+#' @param uuid
+#' @return Job object.
+#' @name jobs.cancel
+NULL
+
+#' jobs.lock is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.lock(uuid)
+#' @param uuid
+#' @return Job object.
+#' @name jobs.lock
+NULL
+
+#' jobs.list is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.list(filters = NULL, where = NULL,
+#' order = NULL, select = NULL, distinct = NULL,
+#' limit = "100", offset = "0", count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return JobList object.
+#' @name jobs.list
+NULL
+
+#' jobs.show is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.show(uuid)
+#' @param uuid
+#' @return Job object.
+#' @name jobs.show
+NULL
+
+#' jobs.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$jobs.destroy(uuid)
+#' @param uuid
+#' @return Job object.
+#' @name jobs.destroy
+NULL
+
+#' keep_disks.get is a method defined in Arvados class.
+#'
+#' @usage arv$keep_disks.get(uuid)
+#' @param uuid The UUID of the KeepDisk in question.
+#' @return KeepDisk object.
+#' @name keep_disks.get
+NULL
+
+#' keep_disks.index is a method defined in Arvados class.
+#'
+#' @usage arv$keep_disks.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return KeepDiskList object.
+#' @name keep_disks.index
+NULL
+
+#' keep_disks.create is a method defined in Arvados class.
+#'
+#' @usage arv$keep_disks.create(keep_disk,
+#' ensure_unique_name = "false")
+#' @param keepDisk KeepDisk object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return KeepDisk object.
+#' @name keep_disks.create
+NULL
+
+#' keep_disks.update is a method defined in Arvados class.
+#'
+#' @usage arv$keep_disks.update(keep_disk,
+#' uuid)
+#' @param keepDisk KeepDisk object.
+#' @param uuid The UUID of the KeepDisk in question.
+#' @return KeepDisk object.
+#' @name keep_disks.update
+NULL
+
+#' keep_disks.delete is a method defined in Arvados class.
+#'
+#' @usage arv$keep_disks.delete(uuid)
+#' @param uuid The UUID of the KeepDisk in question.
+#' @return KeepDisk object.
+#' @name keep_disks.delete
+NULL
+
+#' keep_disks.ping is a method defined in Arvados class.
+#'
+#' @usage arv$keep_disks.ping(uuid = NULL,
+#' ping_secret, node_uuid = NULL, filesystem_uuid = NULL,
+#' service_host = NULL, service_port, service_ssl_flag)
+#' @param uuid
+#' @param ping_secret
+#' @param node_uuid
+#' @param filesystem_uuid
+#' @param service_host
+#' @param service_port
+#' @param service_ssl_flag
+#' @return KeepDisk object.
+#' @name keep_disks.ping
+NULL
+
+#' keep_disks.list is a method defined in Arvados class.
+#'
+#' @usage arv$keep_disks.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return KeepDiskList object.
+#' @name keep_disks.list
+NULL
+
+#' keep_disks.show is a method defined in Arvados class.
+#'
+#' @usage arv$keep_disks.show(uuid)
+#' @param uuid
+#' @return KeepDisk object.
+#' @name keep_disks.show
+NULL
+
+#' keep_disks.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$keep_disks.destroy(uuid)
+#' @param uuid
+#' @return KeepDisk object.
+#' @name keep_disks.destroy
+NULL
+
+#' keep_services.get is a method defined in Arvados class.
+#'
+#' @usage arv$keep_services.get(uuid)
+#' @param uuid The UUID of the KeepService in question.
+#' @return KeepService object.
+#' @name keep_services.get
+NULL
+
+#' keep_services.index is a method defined in Arvados class.
+#'
+#' @usage arv$keep_services.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return KeepServiceList object.
+#' @name keep_services.index
+NULL
+
+#' keep_services.create is a method defined in Arvados class.
+#'
+#' @usage arv$keep_services.create(keep_service,
+#' ensure_unique_name = "false")
+#' @param keepService KeepService object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return KeepService object.
+#' @name keep_services.create
+NULL
+
+#' keep_services.update is a method defined in Arvados class.
+#'
+#' @usage arv$keep_services.update(keep_service,
+#' uuid)
+#' @param keepService KeepService object.
+#' @param uuid The UUID of the KeepService in question.
+#' @return KeepService object.
+#' @name keep_services.update
+NULL
+
+#' keep_services.delete is a method defined in Arvados class.
+#'
+#' @usage arv$keep_services.delete(uuid)
+#' @param uuid The UUID of the KeepService in question.
+#' @return KeepService object.
+#' @name keep_services.delete
+NULL
+
+#' keep_services.accessible is a method defined in Arvados class.
+#'
+#' @usage arv$keep_services.accessible(NULL)
+#' @return KeepService object.
+#' @name keep_services.accessible
+NULL
+
+#' keep_services.list is a method defined in Arvados class.
+#'
+#' @usage arv$keep_services.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return KeepServiceList object.
+#' @name keep_services.list
+NULL
+
+#' keep_services.show is a method defined in Arvados class.
+#'
+#' @usage arv$keep_services.show(uuid)
+#' @param uuid
+#' @return KeepService object.
+#' @name keep_services.show
+NULL
+
+#' keep_services.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$keep_services.destroy(uuid)
+#' @param uuid
+#' @return KeepService object.
+#' @name keep_services.destroy
+NULL
+
+#' pipeline_templates.get is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_templates.get(uuid)
+#' @param uuid The UUID of the PipelineTemplate in question.
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.get
+NULL
+
+#' pipeline_templates.index is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_templates.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return PipelineTemplateList object.
+#' @name pipeline_templates.index
+NULL
+
+#' pipeline_templates.create is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_templates.create(pipeline_template,
+#' ensure_unique_name = "false")
+#' @param pipelineTemplate PipelineTemplate object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.create
+NULL
+
+#' pipeline_templates.update is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_templates.update(pipeline_template,
+#' uuid)
+#' @param pipelineTemplate PipelineTemplate object.
+#' @param uuid The UUID of the PipelineTemplate in question.
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.update
+NULL
+
+#' pipeline_templates.delete is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_templates.delete(uuid)
+#' @param uuid The UUID of the PipelineTemplate in question.
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.delete
+NULL
+
+#' pipeline_templates.list is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_templates.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return PipelineTemplateList object.
+#' @name pipeline_templates.list
+NULL
+
+#' pipeline_templates.show is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_templates.show(uuid)
+#' @param uuid
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.show
+NULL
+
+#' pipeline_templates.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_templates.destroy(uuid)
+#' @param uuid
+#' @return PipelineTemplate object.
+#' @name pipeline_templates.destroy
+NULL
+
+#' pipeline_instances.get is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_instances.get(uuid)
+#' @param uuid The UUID of the PipelineInstance in question.
+#' @return PipelineInstance object.
+#' @name pipeline_instances.get
+NULL
+
+#' pipeline_instances.index is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_instances.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return PipelineInstanceList object.
+#' @name pipeline_instances.index
+NULL
+
+#' pipeline_instances.create is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_instances.create(pipeline_instance,
+#' ensure_unique_name = "false")
+#' @param pipelineInstance PipelineInstance object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return PipelineInstance object.
+#' @name pipeline_instances.create
+NULL
+
+#' pipeline_instances.update is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_instances.update(pipeline_instance,
+#' uuid)
+#' @param pipelineInstance PipelineInstance object.
+#' @param uuid The UUID of the PipelineInstance in question.
+#' @return PipelineInstance object.
+#' @name pipeline_instances.update
+NULL
+
+#' pipeline_instances.delete is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_instances.delete(uuid)
+#' @param uuid The UUID of the PipelineInstance in question.
+#' @return PipelineInstance object.
+#' @name pipeline_instances.delete
+NULL
+
+#' pipeline_instances.cancel is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_instances.cancel(uuid)
+#' @param uuid
+#' @return PipelineInstance object.
+#' @name pipeline_instances.cancel
+NULL
+
+#' pipeline_instances.list is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_instances.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return PipelineInstanceList object.
+#' @name pipeline_instances.list
+NULL
+
+#' pipeline_instances.show is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_instances.show(uuid)
+#' @param uuid
+#' @return PipelineInstance object.
+#' @name pipeline_instances.show
+NULL
+
+#' pipeline_instances.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$pipeline_instances.destroy(uuid)
+#' @param uuid
+#' @return PipelineInstance object.
+#' @name pipeline_instances.destroy
+NULL
+
+#' nodes.get is a method defined in Arvados class.
+#'
+#' @usage arv$nodes.get(uuid)
+#' @param uuid The UUID of the Node in question.
+#' @return Node object.
+#' @name nodes.get
+NULL
+
+#' nodes.index is a method defined in Arvados class.
+#'
+#' @usage arv$nodes.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return NodeList object.
+#' @name nodes.index
+NULL
+
+#' nodes.create is a method defined in Arvados class.
+#'
+#' @usage arv$nodes.create(node, ensure_unique_name = "false",
+#' assign_slot = NULL)
+#' @param node Node object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @param assign_slot assign slot and hostname
+#' @return Node object.
+#' @name nodes.create
+NULL
+
+#' nodes.update is a method defined in Arvados class.
+#'
+#' @usage arv$nodes.update(node, uuid, assign_slot = NULL)
+#' @param node Node object.
+#' @param uuid The UUID of the Node in question.
+#' @param assign_slot assign slot and hostname
+#' @return Node object.
+#' @name nodes.update
+NULL
+
+#' nodes.delete is a method defined in Arvados class.
+#'
+#' @usage arv$nodes.delete(uuid)
+#' @param uuid The UUID of the Node in question.
+#' @return Node object.
+#' @name nodes.delete
+NULL
+
+#' nodes.ping is a method defined in Arvados class.
+#'
+#' @usage arv$nodes.ping(uuid, ping_secret)
+#' @param uuid
+#' @param ping_secret
+#' @return Node object.
+#' @name nodes.ping
+NULL
+
+#' nodes.list is a method defined in Arvados class.
+#'
+#' @usage arv$nodes.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return NodeList object.
+#' @name nodes.list
+NULL
+
+#' nodes.show is a method defined in Arvados class.
+#'
+#' @usage arv$nodes.show(uuid)
+#' @param uuid
+#' @return Node object.
+#' @name nodes.show
+NULL
+
+#' nodes.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$nodes.destroy(uuid)
+#' @param uuid
+#' @return Node object.
+#' @name nodes.destroy
+NULL
+
+#' repositories.get is a method defined in Arvados class.
+#'
+#' @usage arv$repositories.get(uuid)
+#' @param uuid The UUID of the Repository in question.
+#' @return Repository object.
+#' @name repositories.get
+NULL
+
+#' repositories.index is a method defined in Arvados class.
+#'
+#' @usage arv$repositories.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return RepositoryList object.
+#' @name repositories.index
+NULL
+
+#' repositories.create is a method defined in Arvados class.
+#'
+#' @usage arv$repositories.create(repository,
+#' ensure_unique_name = "false")
+#' @param repository Repository object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Repository object.
+#' @name repositories.create
+NULL
+
+#' repositories.update is a method defined in Arvados class.
+#'
+#' @usage arv$repositories.update(repository,
+#' uuid)
+#' @param repository Repository object.
+#' @param uuid The UUID of the Repository in question.
+#' @return Repository object.
+#' @name repositories.update
+NULL
+
+#' repositories.delete is a method defined in Arvados class.
+#'
+#' @usage arv$repositories.delete(uuid)
+#' @param uuid The UUID of the Repository in question.
+#' @return Repository object.
+#' @name repositories.delete
+NULL
+
+#' repositories.get_all_permissions is a method defined in Arvados class.
+#'
+#' @usage arv$repositories.get_all_permissions(NULL)
+#' @return Repository object.
+#' @name repositories.get_all_permissions
+NULL
+
+#' repositories.list is a method defined in Arvados class.
+#'
+#' @usage arv$repositories.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return RepositoryList object.
+#' @name repositories.list
+NULL
+
+#' repositories.show is a method defined in Arvados class.
+#'
+#' @usage arv$repositories.show(uuid)
+#' @param uuid
+#' @return Repository object.
+#' @name repositories.show
+NULL
+
+#' repositories.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$repositories.destroy(uuid)
+#' @param uuid
+#' @return Repository object.
+#' @name repositories.destroy
+NULL
+
+#' specimens.get is a method defined in Arvados class.
+#'
+#' @usage arv$specimens.get(uuid)
+#' @param uuid The UUID of the Specimen in question.
+#' @return Specimen object.
+#' @name specimens.get
+NULL
+
+#' specimens.index is a method defined in Arvados class.
+#'
+#' @usage arv$specimens.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return SpecimenList object.
+#' @name specimens.index
+NULL
+
+#' specimens.create is a method defined in Arvados class.
+#'
+#' @usage arv$specimens.create(specimen,
+#' ensure_unique_name = "false")
+#' @param specimen Specimen object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Specimen object.
+#' @name specimens.create
+NULL
+
+#' specimens.update is a method defined in Arvados class.
+#'
+#' @usage arv$specimens.update(specimen,
+#' uuid)
+#' @param specimen Specimen object.
+#' @param uuid The UUID of the Specimen in question.
+#' @return Specimen object.
+#' @name specimens.update
+NULL
+
+#' specimens.delete is a method defined in Arvados class.
+#'
+#' @usage arv$specimens.delete(uuid)
+#' @param uuid The UUID of the Specimen in question.
+#' @return Specimen object.
+#' @name specimens.delete
+NULL
+
+#' specimens.list is a method defined in Arvados class.
+#'
+#' @usage arv$specimens.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return SpecimenList object.
+#' @name specimens.list
+NULL
+
+#' specimens.show is a method defined in Arvados class.
+#'
+#' @usage arv$specimens.show(uuid)
+#' @param uuid
+#' @return Specimen object.
+#' @name specimens.show
+NULL
+
+#' specimens.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$specimens.destroy(uuid)
+#' @param uuid
+#' @return Specimen object.
+#' @name specimens.destroy
+NULL
+
+#' logs.get is a method defined in Arvados class.
+#'
+#' @usage arv$logs.get(uuid)
+#' @param uuid The UUID of the Log in question.
+#' @return Log object.
+#' @name logs.get
+NULL
+
+#' logs.index is a method defined in Arvados class.
+#'
+#' @usage arv$logs.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return LogList object.
+#' @name logs.index
+NULL
+
+#' logs.create is a method defined in Arvados class.
+#'
+#' @usage arv$logs.create(log, ensure_unique_name = "false")
+#' @param log Log object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Log object.
+#' @name logs.create
+NULL
+
+#' logs.update is a method defined in Arvados class.
+#'
+#' @usage arv$logs.update(log, uuid)
+#' @param log Log object.
+#' @param uuid The UUID of the Log in question.
+#' @return Log object.
+#' @name logs.update
+NULL
+
+#' logs.delete is a method defined in Arvados class.
+#'
+#' @usage arv$logs.delete(uuid)
+#' @param uuid The UUID of the Log in question.
+#' @return Log object.
+#' @name logs.delete
+NULL
+
+#' logs.list is a method defined in Arvados class.
+#'
+#' @usage arv$logs.list(filters = NULL, where = NULL,
+#' order = NULL, select = NULL, distinct = NULL,
+#' limit = "100", offset = "0", count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return LogList object.
+#' @name logs.list
+NULL
+
+#' logs.show is a method defined in Arvados class.
+#'
+#' @usage arv$logs.show(uuid)
+#' @param uuid
+#' @return Log object.
+#' @name logs.show
+NULL
+
+#' logs.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$logs.destroy(uuid)
+#' @param uuid
+#' @return Log object.
+#' @name logs.destroy
+NULL
+
+#' traits.get is a method defined in Arvados class.
+#'
+#' @usage arv$traits.get(uuid)
+#' @param uuid The UUID of the Trait in question.
+#' @return Trait object.
+#' @name traits.get
+NULL
+
+#' traits.index is a method defined in Arvados class.
+#'
+#' @usage arv$traits.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return TraitList object.
+#' @name traits.index
+NULL
+
+#' traits.create is a method defined in Arvados class.
+#'
+#' @usage arv$traits.create(trait, ensure_unique_name = "false")
+#' @param trait Trait object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Trait object.
+#' @name traits.create
+NULL
+
+#' traits.update is a method defined in Arvados class.
+#'
+#' @usage arv$traits.update(trait, uuid)
+#' @param trait Trait object.
+#' @param uuid The UUID of the Trait in question.
+#' @return Trait object.
+#' @name traits.update
+NULL
+
+#' traits.delete is a method defined in Arvados class.
+#'
+#' @usage arv$traits.delete(uuid)
+#' @param uuid The UUID of the Trait in question.
+#' @return Trait object.
+#' @name traits.delete
+NULL
+
+#' traits.list is a method defined in Arvados class.
+#'
+#' @usage arv$traits.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return TraitList object.
+#' @name traits.list
+NULL
+
+#' traits.show is a method defined in Arvados class.
+#'
+#' @usage arv$traits.show(uuid)
+#' @param uuid
+#' @return Trait object.
+#' @name traits.show
+NULL
+
+#' traits.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$traits.destroy(uuid)
+#' @param uuid
+#' @return Trait object.
+#' @name traits.destroy
+NULL
+
+#' virtual_machines.get is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.get(uuid)
+#' @param uuid The UUID of the VirtualMachine in question.
+#' @return VirtualMachine object.
+#' @name virtual_machines.get
+NULL
+
+#' virtual_machines.index is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return VirtualMachineList object.
+#' @name virtual_machines.index
+NULL
+
+#' virtual_machines.create is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.create(virtual_machine,
+#' ensure_unique_name = "false")
+#' @param virtualMachine VirtualMachine object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return VirtualMachine object.
+#' @name virtual_machines.create
+NULL
+
+#' virtual_machines.update is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.update(virtual_machine,
+#' uuid)
+#' @param virtualMachine VirtualMachine object.
+#' @param uuid The UUID of the VirtualMachine in question.
+#' @return VirtualMachine object.
+#' @name virtual_machines.update
+NULL
+
+#' virtual_machines.delete is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.delete(uuid)
+#' @param uuid The UUID of the VirtualMachine in question.
+#' @return VirtualMachine object.
+#' @name virtual_machines.delete
+NULL
+
+#' virtual_machines.logins is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.logins(uuid)
+#' @param uuid
+#' @return VirtualMachine object.
+#' @name virtual_machines.logins
+NULL
+
+#' virtual_machines.get_all_logins is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.get_all_logins(NULL)
+#' @return VirtualMachine object.
+#' @name virtual_machines.get_all_logins
+NULL
+
+#' virtual_machines.list is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return VirtualMachineList object.
+#' @name virtual_machines.list
+NULL
+
+#' virtual_machines.show is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.show(uuid)
+#' @param uuid
+#' @return VirtualMachine object.
+#' @name virtual_machines.show
+NULL
+
+#' virtual_machines.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$virtual_machines.destroy(uuid)
+#' @param uuid
+#' @return VirtualMachine object.
+#' @name virtual_machines.destroy
+NULL
+
+#' workflows.get is a method defined in Arvados class.
+#'
+#' @usage arv$workflows.get(uuid)
+#' @param uuid The UUID of the Workflow in question.
+#' @return Workflow object.
+#' @name workflows.get
+NULL
+
+#' workflows.index is a method defined in Arvados class.
+#'
+#' @usage arv$workflows.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return WorkflowList object.
+#' @name workflows.index
+NULL
+
+#' workflows.create is a method defined in Arvados class.
+#'
+#' @usage arv$workflows.create(workflow,
+#' ensure_unique_name = "false")
+#' @param workflow Workflow object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Workflow object.
+#' @name workflows.create
+NULL
+
+#' workflows.update is a method defined in Arvados class.
+#'
+#' @usage arv$workflows.update(workflow,
+#' uuid)
+#' @param workflow Workflow object.
+#' @param uuid The UUID of the Workflow in question.
+#' @return Workflow object.
+#' @name workflows.update
+NULL
+
+#' workflows.delete is a method defined in Arvados class.
+#'
+#' @usage arv$workflows.delete(uuid)
+#' @param uuid The UUID of the Workflow in question.
+#' @return Workflow object.
+#' @name workflows.delete
+NULL
+
+#' workflows.list is a method defined in Arvados class.
+#'
+#' @usage arv$workflows.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return WorkflowList object.
+#' @name workflows.list
+NULL
+
+#' workflows.show is a method defined in Arvados class.
+#'
+#' @usage arv$workflows.show(uuid)
+#' @param uuid
+#' @return Workflow object.
+#' @name workflows.show
+NULL
+
+#' workflows.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$workflows.destroy(uuid)
+#' @param uuid
+#' @return Workflow object.
+#' @name workflows.destroy
+NULL
+
+#' groups.get is a method defined in Arvados class.
+#'
+#' @usage arv$groups.get(uuid)
+#' @param uuid The UUID of the Group in question.
+#' @return Group object.
+#' @name groups.get
+NULL
+
+#' groups.index is a method defined in Arvados class.
+#'
+#' @usage arv$groups.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact", include_trash = NULL)
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @param include_trash Include items whose is_trashed attribute is true.
+#' @return GroupList object.
+#' @name groups.index
+NULL
+
+#' groups.create is a method defined in Arvados class.
+#'
+#' @usage arv$groups.create(group, ensure_unique_name = "false")
+#' @param group Group object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return Group object.
+#' @name groups.create
+NULL
+
+#' groups.update is a method defined in Arvados class.
+#'
+#' @usage arv$groups.update(group, uuid)
+#' @param group Group object.
+#' @param uuid The UUID of the Group in question.
+#' @return Group object.
+#' @name groups.update
+NULL
+
+#' groups.delete is a method defined in Arvados class.
+#'
+#' @usage arv$groups.delete(uuid)
+#' @param uuid The UUID of the Group in question.
+#' @return Group object.
+#' @name groups.delete
+NULL
+
+#' groups.contents is a method defined in Arvados class.
+#'
+#' @usage arv$groups.contents(filters = NULL,
+#' where = NULL, order = NULL, distinct = NULL,
+#' limit = "100", offset = "0", count = "exact",
+#' include_trash = NULL, uuid = NULL, recursive = NULL)
+#' @param filters
+#' @param where
+#' @param order
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @param include_trash Include items whose is_trashed attribute is true.
+#' @param uuid
+#' @param recursive Include contents from child groups recursively.
+#' @return Group object.
+#' @name groups.contents
+NULL
+
+#' groups.trash is a method defined in Arvados class.
+#'
+#' @usage arv$groups.trash(uuid)
+#' @param uuid
+#' @return Group object.
+#' @name groups.trash
+NULL
+
+#' groups.untrash is a method defined in Arvados class.
+#'
+#' @usage arv$groups.untrash(uuid)
+#' @param uuid
+#' @return Group object.
+#' @name groups.untrash
+NULL
+
+#' groups.list is a method defined in Arvados class.
+#'
+#' @usage arv$groups.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact", include_trash = NULL)
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @param include_trash Include items whose is_trashed attribute is true.
+#' @return GroupList object.
+#' @name groups.list
+NULL
+
+#' groups.show is a method defined in Arvados class.
+#'
+#' @usage arv$groups.show(uuid)
+#' @param uuid
+#' @return Group object.
+#' @name groups.show
+NULL
+
+#' groups.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$groups.destroy(uuid)
+#' @param uuid
+#' @return Group object.
+#' @name groups.destroy
+NULL
+
+#' user_agreements.get is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.get(uuid)
+#' @param uuid The UUID of the UserAgreement in question.
+#' @return UserAgreement object.
+#' @name user_agreements.get
+NULL
+
+#' user_agreements.index is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.index(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return UserAgreementList object.
+#' @name user_agreements.index
+NULL
+
+#' user_agreements.create is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.create(user_agreement,
+#' ensure_unique_name = "false")
+#' @param userAgreement UserAgreement object.
+#' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
+#' @return UserAgreement object.
+#' @name user_agreements.create
+NULL
+
+#' user_agreements.update is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.update(user_agreement,
+#' uuid)
+#' @param userAgreement UserAgreement object.
+#' @param uuid The UUID of the UserAgreement in question.
+#' @return UserAgreement object.
+#' @name user_agreements.update
+NULL
+
+#' user_agreements.delete is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.delete(uuid)
+#' @param uuid The UUID of the UserAgreement in question.
+#' @return UserAgreement object.
+#' @name user_agreements.delete
+NULL
+
+#' user_agreements.signatures is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.signatures(NULL)
+#' @return UserAgreement object.
+#' @name user_agreements.signatures
+NULL
+
+#' user_agreements.sign is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.sign(NULL)
+#' @return UserAgreement object.
+#' @name user_agreements.sign
+NULL
+
+#' user_agreements.list is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.list(filters = NULL,
+#' where = NULL, order = NULL, select = NULL,
+#' distinct = NULL, limit = "100", offset = "0",
+#' count = "exact")
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
+#' @return UserAgreementList object.
+#' @name user_agreements.list
+NULL
+
+#' user_agreements.new is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.new(NULL)
+#' @return UserAgreement object.
+#' @name user_agreements.new
+NULL
+
+#' user_agreements.show is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.show(uuid)
+#' @param uuid
+#' @return UserAgreement object.
+#' @name user_agreements.show
+NULL
+
+#' user_agreements.destroy is a method defined in Arvados class.
+#'
+#' @usage arv$user_agreements.destroy(uuid)
+#' @param uuid
+#' @return UserAgreement object.
+#' @name user_agreements.destroy
+NULL
+
#' @export
Arvados <- R6::R6Class(
private$tree$getElement(relativePath)
},
+ toJSON = function()
+ {
+ fields <- sapply(private$classFields, function(field)
+ {
+ self[[field]]
+ }, USE.NAMES = TRUE)
+
+ jsonlite::toJSON(list("collection" =
+ Filter(Negate(is.null), fields)), auto_unbox = TRUE)
+ },
+
getRESTService = function() private$REST,
setRESTService = function(newRESTService) private$REST <- newRESTService
),
#' @export
generateAPI <- function()
{
+ #TODO: Consider passing discovery document URL as parameter
+ #TODO: Consider passing location where to create new files.
JSONDocument <- getAPIDocument()
generateArvadosClasses(JSONDocument)
generateArvadosAPIClass <- function(discoveryDocument)
{
- classMetaData <- discoveryDocument$schemas
+ classMetaData <- discoveryDocument$schemas
functionResources <- discoveryDocument$resources
resourceNames <- names(functionResources)
+ doc <- generateMethodsDocumentation(functionResources, resourceNames)
arvadosAPIHeader <- generateAPIClassHeader()
+ arvadosClassMethods <- generateClassContent(functionResources,
+ resourceNames, classMetaData)
arvadosAPIFooter <- generateAPIClassFooter()
+ arvadosClass <- c(doc, arvadosAPIHeader, arvadosClassMethods, arvadosAPIFooter)
+
+ #TODO: Save to a file or load in memory?
+ fileConn <- file("./R/Arvados.R", "w")
+ writeLines(unlist(arvadosClass), fileConn)
+ close(fileConn)
+ NULL
+}
+
+generateClassContent <- function(functionResources, resourceNames, classMetaData)
+{
+
arvadosMethods <- Map(function(resource, resourceName)
{
methodNames <- names(resource$methods)
}, functionResources, resourceNames)
- arvadosClass <- c(arvadosAPIHeader, arvadosMethods, arvadosAPIFooter)
+ arvadosMethods
+}
- #TODO: Save to a file or load in memory?
- fileConn <- file("./R/Arvados.R", "w")
- writeLines(unlist(arvadosClass), fileConn)
- close(fileConn)
- NULL
+generateMethodsDocumentation <- function(functionResources, resourceNames)
+{
+ arvadosMethods <- unlist(unname(Map(function(resource, resourceName)
+ {
+ methodNames <- names(resource$methods)
+
+ functions <- Map(function(methodMetaData, methodName)
+ {
+ methodName <- paste0(resourceName, ".", methodName)
+ getMethodDocumentation(methodName, methodMetaData)
+
+ }, resource$methods, methodNames)
+
+ unlist(unname(functions))
+
+ }, functionResources, resourceNames)))
+
+ arvadosMethods
+}
+
+getMethodDocumentation <- function(methodName, methodMetaData)
+{
+ name <- paste("#' @name", methodName)
+ usage <- getMethodUsage(methodName, methodMetaData)
+ description <- paste("#'", methodName, "is a method defined in Arvados class.")
+ params <- getMethodDescription(methodMetaData)
+ returnValue <- paste("#' @return", methodMetaData$response[["$ref"]], "object.")
+
+ c(description,
+ "#' ",
+ usage,
+ params,
+ returnValue,
+ name,
+ "NULL",
+ "")
+}
+
+getMethodUsage <- function(methodName, methodMetaData)
+{
+ args <- getFunctionArguments(methodMetaData)
+ c(formatArgs(paste0("#' @usage arv$", methodName, "("), "#' \t", args, ")", 40))
+}
+
+getMethodDescription <- function(methodMetaData)
+{
+ request <- methodMetaData$request
+ requestDoc <- NULL
+
+ if(!is.null(request))
+ {
+ requestDoc <- unname(unlist(sapply(request$properties, function(prop)
+ {
+ className <- sapply(prop, function(ref) ref)
+ objectName <- paste0(tolower(substr(className, 1, 1)),
+ substr(className, 2, nchar(className)))
+ paste("#' @param", objectName, className, "object.")
+ })))
+ }
+
+ argNames <- names(methodMetaData$parameters)
+
+ argsDoc <- unname(unlist(sapply(argNames, function(argName)
+ {
+ arg <- methodMetaData$parameters[[argName]]
+ argDescription <- arg$description
+ paste("#' @param", argName, argDescription)
+ })))
+
+ c(requestDoc, argsDoc)
}
getFunctionName <- function(functionMetaData)
getFunctionArguments <- function(functionMetaData)
{
request <- functionMetaData$request
- requestArgument <- NULL
+ requestArgs <- NULL
if(!is.null(request))
+ {
if(request$required)
- requestArgument <- names(request$properties)
+ requestArgs <- names(request$properties)
else
- requestArgument <- paste(names(request$properties), "=", "NULL")
+ requestArgs <- paste(names(request$properties), "=", "NULL")
+ }
argNames <- names(functionMetaData$parameters)
argName
})
- paste0(c(requestArgument, args))
+ c(requestArgs, args)
}
getFunctionBody <- function(functionMetaData, classMetaData)
body <- getFunctionBody(functionMetaData, classMetaData)
funSignature <- getFunSignature(functionName, args)
- functionString <- c(funSignature,
- "\t\t{",
- body,
- "\t\t},\n")
-
- functionString
+ c(funSignature,
+ "\t\t{",
+ body,
+ "\t\t},\n")
}
getFunSignature <- function(funName, args)
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.create}
+\alias{api_client_authorizations.create}
+\title{api_client_authorizations.create is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.create(api_client_authorization,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{apiClientAuthorization}{ApiClientAuthorization object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+ApiClientAuthorization object.
+}
+\description{
+api_client_authorizations.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.create_system_auth}
+\alias{api_client_authorizations.create_system_auth}
+\title{api_client_authorizations.create_system_auth is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.create_system_auth(api_client_id = NULL,
+ scopes = NULL)
+}
+\arguments{
+\item{api_client_id}{}
+
+\item{scopes}{}
+}
+\value{
+ApiClientAuthorization object.
+}
+\description{
+api_client_authorizations.create_system_auth is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.current}
+\alias{api_client_authorizations.current}
+\title{api_client_authorizations.current is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.current(NULL)
+}
+\value{
+ApiClientAuthorization object.
+}
+\description{
+api_client_authorizations.current is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.delete}
+\alias{api_client_authorizations.delete}
+\title{api_client_authorizations.delete is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the ApiClientAuthorization in question.}
+}
+\value{
+ApiClientAuthorization object.
+}
+\description{
+api_client_authorizations.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.destroy}
+\alias{api_client_authorizations.destroy}
+\title{api_client_authorizations.destroy is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+ApiClientAuthorization object.
+}
+\description{
+api_client_authorizations.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.get}
+\alias{api_client_authorizations.get}
+\title{api_client_authorizations.get is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the ApiClientAuthorization in question.}
+}
+\value{
+ApiClientAuthorization object.
+}
+\description{
+api_client_authorizations.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.index}
+\alias{api_client_authorizations.index}
+\title{api_client_authorizations.index is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+ApiClientAuthorizationList object.
+}
+\description{
+api_client_authorizations.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.list}
+\alias{api_client_authorizations.list}
+\title{api_client_authorizations.list is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+ApiClientAuthorizationList object.
+}
+\description{
+api_client_authorizations.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.show}
+\alias{api_client_authorizations.show}
+\title{api_client_authorizations.show is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+ApiClientAuthorization object.
+}
+\description{
+api_client_authorizations.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_client_authorizations.update}
+\alias{api_client_authorizations.update}
+\title{api_client_authorizations.update is a method defined in Arvados class.}
+\usage{
+arv$api_client_authorizations.update(api_client_authorization,
+ uuid)
+}
+\arguments{
+\item{apiClientAuthorization}{ApiClientAuthorization object.}
+
+\item{uuid}{The UUID of the ApiClientAuthorization in question.}
+}
+\value{
+ApiClientAuthorization object.
+}
+\description{
+api_client_authorizations.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_clients.create}
+\alias{api_clients.create}
+\title{api_clients.create is a method defined in Arvados class.}
+\usage{
+arv$api_clients.create(api_client,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{apiClient}{ApiClient object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+ApiClient object.
+}
+\description{
+api_clients.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_clients.delete}
+\alias{api_clients.delete}
+\title{api_clients.delete is a method defined in Arvados class.}
+\usage{
+arv$api_clients.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the ApiClient in question.}
+}
+\value{
+ApiClient object.
+}
+\description{
+api_clients.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_clients.destroy}
+\alias{api_clients.destroy}
+\title{api_clients.destroy is a method defined in Arvados class.}
+\usage{
+arv$api_clients.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+ApiClient object.
+}
+\description{
+api_clients.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_clients.get}
+\alias{api_clients.get}
+\title{api_clients.get is a method defined in Arvados class.}
+\usage{
+arv$api_clients.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the ApiClient in question.}
+}
+\value{
+ApiClient object.
+}
+\description{
+api_clients.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_clients.index}
+\alias{api_clients.index}
+\title{api_clients.index is a method defined in Arvados class.}
+\usage{
+arv$api_clients.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+ApiClientList object.
+}
+\description{
+api_clients.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_clients.list}
+\alias{api_clients.list}
+\title{api_clients.list is a method defined in Arvados class.}
+\usage{
+arv$api_clients.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+ApiClientList object.
+}
+\description{
+api_clients.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_clients.show}
+\alias{api_clients.show}
+\title{api_clients.show is a method defined in Arvados class.}
+\usage{
+arv$api_clients.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+ApiClient object.
+}
+\description{
+api_clients.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{api_clients.update}
+\alias{api_clients.update}
+\title{api_clients.update is a method defined in Arvados class.}
+\usage{
+arv$api_clients.update(api_client,
+ uuid)
+}
+\arguments{
+\item{apiClient}{ApiClient object.}
+
+\item{uuid}{The UUID of the ApiClient in question.}
+}
+\value{
+ApiClient object.
+}
+\description{
+api_clients.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{authorized_keys.create}
+\alias{authorized_keys.create}
+\title{authorized_keys.create is a method defined in Arvados class.}
+\usage{
+arv$authorized_keys.create(authorized_key,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{authorizedKey}{AuthorizedKey object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+AuthorizedKey object.
+}
+\description{
+authorized_keys.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{authorized_keys.delete}
+\alias{authorized_keys.delete}
+\title{authorized_keys.delete is a method defined in Arvados class.}
+\usage{
+arv$authorized_keys.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the AuthorizedKey in question.}
+}
+\value{
+AuthorizedKey object.
+}
+\description{
+authorized_keys.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{authorized_keys.destroy}
+\alias{authorized_keys.destroy}
+\title{authorized_keys.destroy is a method defined in Arvados class.}
+\usage{
+arv$authorized_keys.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+AuthorizedKey object.
+}
+\description{
+authorized_keys.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{authorized_keys.get}
+\alias{authorized_keys.get}
+\title{authorized_keys.get is a method defined in Arvados class.}
+\usage{
+arv$authorized_keys.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the AuthorizedKey in question.}
+}
+\value{
+AuthorizedKey object.
+}
+\description{
+authorized_keys.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{authorized_keys.index}
+\alias{authorized_keys.index}
+\title{authorized_keys.index is a method defined in Arvados class.}
+\usage{
+arv$authorized_keys.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+AuthorizedKeyList object.
+}
+\description{
+authorized_keys.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{authorized_keys.list}
+\alias{authorized_keys.list}
+\title{authorized_keys.list is a method defined in Arvados class.}
+\usage{
+arv$authorized_keys.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+AuthorizedKeyList object.
+}
+\description{
+authorized_keys.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{authorized_keys.show}
+\alias{authorized_keys.show}
+\title{authorized_keys.show is a method defined in Arvados class.}
+\usage{
+arv$authorized_keys.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+AuthorizedKey object.
+}
+\description{
+authorized_keys.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{authorized_keys.update}
+\alias{authorized_keys.update}
+\title{authorized_keys.update is a method defined in Arvados class.}
+\usage{
+arv$authorized_keys.update(authorized_key,
+ uuid)
+}
+\arguments{
+\item{authorizedKey}{AuthorizedKey object.}
+
+\item{uuid}{The UUID of the AuthorizedKey in question.}
+}
+\value{
+AuthorizedKey object.
+}
+\description{
+authorized_keys.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.create}
+\alias{collections.create}
+\title{collections.create is a method defined in Arvados class.}
+\usage{
+arv$collections.create(collection,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{collection}{Collection object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Collection object.
+}
+\description{
+collections.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.delete}
+\alias{collections.delete}
+\title{collections.delete is a method defined in Arvados class.}
+\usage{
+arv$collections.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Collection in question.}
+}
+\value{
+Collection object.
+}
+\description{
+collections.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.destroy}
+\alias{collections.destroy}
+\title{collections.destroy is a method defined in Arvados class.}
+\usage{
+arv$collections.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Collection object.
+}
+\description{
+collections.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.get}
+\alias{collections.get}
+\title{collections.get is a method defined in Arvados class.}
+\usage{
+arv$collections.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Collection in question.}
+}
+\value{
+Collection object.
+}
+\description{
+collections.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.index}
+\alias{collections.index}
+\title{collections.index is a method defined in Arvados class.}
+\usage{
+arv$collections.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact", include_trash = NULL)
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+
+\item{include_trash}{Include collections whose is_trashed attribute is true.}
+}
+\value{
+CollectionList object.
+}
+\description{
+collections.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.list}
+\alias{collections.list}
+\title{collections.list is a method defined in Arvados class.}
+\usage{
+arv$collections.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact", include_trash = NULL)
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+
+\item{include_trash}{Include collections whose is_trashed attribute is true.}
+}
+\value{
+CollectionList object.
+}
+\description{
+collections.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.provenance}
+\alias{collections.provenance}
+\title{collections.provenance is a method defined in Arvados class.}
+\usage{
+arv$collections.provenance(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Collection object.
+}
+\description{
+collections.provenance is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.show}
+\alias{collections.show}
+\title{collections.show is a method defined in Arvados class.}
+\usage{
+arv$collections.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Collection object.
+}
+\description{
+collections.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.trash}
+\alias{collections.trash}
+\title{collections.trash is a method defined in Arvados class.}
+\usage{
+arv$collections.trash(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Collection object.
+}
+\description{
+collections.trash is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.untrash}
+\alias{collections.untrash}
+\title{collections.untrash is a method defined in Arvados class.}
+\usage{
+arv$collections.untrash(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Collection object.
+}
+\description{
+collections.untrash is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.update}
+\alias{collections.update}
+\title{collections.update is a method defined in Arvados class.}
+\usage{
+arv$collections.update(collection,
+ uuid)
+}
+\arguments{
+\item{collection}{Collection object.}
+
+\item{uuid}{The UUID of the Collection in question.}
+}
+\value{
+Collection object.
+}
+\description{
+collections.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{collections.used_by}
+\alias{collections.used_by}
+\title{collections.used_by is a method defined in Arvados class.}
+\usage{
+arv$collections.used_by(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Collection object.
+}
+\description{
+collections.used_by is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{container_requests.create}
+\alias{container_requests.create}
+\title{container_requests.create is a method defined in Arvados class.}
+\usage{
+arv$container_requests.create(container_request,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{containerRequest}{ContainerRequest object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+ContainerRequest object.
+}
+\description{
+container_requests.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{container_requests.delete}
+\alias{container_requests.delete}
+\title{container_requests.delete is a method defined in Arvados class.}
+\usage{
+arv$container_requests.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the ContainerRequest in question.}
+}
+\value{
+ContainerRequest object.
+}
+\description{
+container_requests.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{container_requests.destroy}
+\alias{container_requests.destroy}
+\title{container_requests.destroy is a method defined in Arvados class.}
+\usage{
+arv$container_requests.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+ContainerRequest object.
+}
+\description{
+container_requests.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{container_requests.get}
+\alias{container_requests.get}
+\title{container_requests.get is a method defined in Arvados class.}
+\usage{
+arv$container_requests.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the ContainerRequest in question.}
+}
+\value{
+ContainerRequest object.
+}
+\description{
+container_requests.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{container_requests.index}
+\alias{container_requests.index}
+\title{container_requests.index is a method defined in Arvados class.}
+\usage{
+arv$container_requests.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+ContainerRequestList object.
+}
+\description{
+container_requests.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{container_requests.list}
+\alias{container_requests.list}
+\title{container_requests.list is a method defined in Arvados class.}
+\usage{
+arv$container_requests.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+ContainerRequestList object.
+}
+\description{
+container_requests.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{container_requests.show}
+\alias{container_requests.show}
+\title{container_requests.show is a method defined in Arvados class.}
+\usage{
+arv$container_requests.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+ContainerRequest object.
+}
+\description{
+container_requests.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{container_requests.update}
+\alias{container_requests.update}
+\title{container_requests.update is a method defined in Arvados class.}
+\usage{
+arv$container_requests.update(container_request,
+ uuid)
+}
+\arguments{
+\item{containerRequest}{ContainerRequest object.}
+
+\item{uuid}{The UUID of the ContainerRequest in question.}
+}
+\value{
+ContainerRequest object.
+}
+\description{
+container_requests.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.auth}
+\alias{containers.auth}
+\title{containers.auth is a method defined in Arvados class.}
+\usage{
+arv$containers.auth(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Container object.
+}
+\description{
+containers.auth is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.create}
+\alias{containers.create}
+\title{containers.create is a method defined in Arvados class.}
+\usage{
+arv$containers.create(container,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{container}{Container object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Container object.
+}
+\description{
+containers.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.current}
+\alias{containers.current}
+\title{containers.current is a method defined in Arvados class.}
+\usage{
+arv$containers.current(NULL)
+}
+\value{
+Container object.
+}
+\description{
+containers.current is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.delete}
+\alias{containers.delete}
+\title{containers.delete is a method defined in Arvados class.}
+\usage{
+arv$containers.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Container in question.}
+}
+\value{
+Container object.
+}
+\description{
+containers.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.destroy}
+\alias{containers.destroy}
+\title{containers.destroy is a method defined in Arvados class.}
+\usage{
+arv$containers.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Container object.
+}
+\description{
+containers.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.get}
+\alias{containers.get}
+\title{containers.get is a method defined in Arvados class.}
+\usage{
+arv$containers.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Container in question.}
+}
+\value{
+Container object.
+}
+\description{
+containers.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.index}
+\alias{containers.index}
+\title{containers.index is a method defined in Arvados class.}
+\usage{
+arv$containers.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+ContainerList object.
+}
+\description{
+containers.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.list}
+\alias{containers.list}
+\title{containers.list is a method defined in Arvados class.}
+\usage{
+arv$containers.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+ContainerList object.
+}
+\description{
+containers.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.lock}
+\alias{containers.lock}
+\title{containers.lock is a method defined in Arvados class.}
+\usage{
+arv$containers.lock(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Container object.
+}
+\description{
+containers.lock is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.show}
+\alias{containers.show}
+\title{containers.show is a method defined in Arvados class.}
+\usage{
+arv$containers.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Container object.
+}
+\description{
+containers.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.unlock}
+\alias{containers.unlock}
+\title{containers.unlock is a method defined in Arvados class.}
+\usage{
+arv$containers.unlock(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Container object.
+}
+\description{
+containers.unlock is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{containers.update}
+\alias{containers.update}
+\title{containers.update is a method defined in Arvados class.}
+\usage{
+arv$containers.update(container,
+ uuid)
+}
+\arguments{
+\item{container}{Container object.}
+
+\item{uuid}{The UUID of the Container in question.}
+}
+\value{
+Container object.
+}
+\description{
+containers.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.contents}
+\alias{groups.contents}
+\title{groups.contents is a method defined in Arvados class.}
+\usage{
+arv$groups.contents(filters = NULL,
+ where = NULL, order = NULL, distinct = NULL,
+ limit = "100", offset = "0", count = "exact",
+ include_trash = NULL, uuid = NULL, recursive = NULL)
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+
+\item{include_trash}{Include items whose is_trashed attribute is true.}
+
+\item{uuid}{}
+
+\item{recursive}{Include contents from child groups recursively.}
+}
+\value{
+Group object.
+}
+\description{
+groups.contents is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.create}
+\alias{groups.create}
+\title{groups.create is a method defined in Arvados class.}
+\usage{
+arv$groups.create(group, ensure_unique_name = "false")
+}
+\arguments{
+\item{group}{Group object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Group object.
+}
+\description{
+groups.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.delete}
+\alias{groups.delete}
+\title{groups.delete is a method defined in Arvados class.}
+\usage{
+arv$groups.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Group in question.}
+}
+\value{
+Group object.
+}
+\description{
+groups.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.destroy}
+\alias{groups.destroy}
+\title{groups.destroy is a method defined in Arvados class.}
+\usage{
+arv$groups.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Group object.
+}
+\description{
+groups.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.get}
+\alias{groups.get}
+\title{groups.get is a method defined in Arvados class.}
+\usage{
+arv$groups.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Group in question.}
+}
+\value{
+Group object.
+}
+\description{
+groups.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.index}
+\alias{groups.index}
+\title{groups.index is a method defined in Arvados class.}
+\usage{
+arv$groups.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact", include_trash = NULL)
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+
+\item{include_trash}{Include items whose is_trashed attribute is true.}
+}
+\value{
+GroupList object.
+}
+\description{
+groups.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.list}
+\alias{groups.list}
+\title{groups.list is a method defined in Arvados class.}
+\usage{
+arv$groups.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact", include_trash = NULL)
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+
+\item{include_trash}{Include items whose is_trashed attribute is true.}
+}
+\value{
+GroupList object.
+}
+\description{
+groups.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.show}
+\alias{groups.show}
+\title{groups.show is a method defined in Arvados class.}
+\usage{
+arv$groups.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Group object.
+}
+\description{
+groups.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.trash}
+\alias{groups.trash}
+\title{groups.trash is a method defined in Arvados class.}
+\usage{
+arv$groups.trash(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Group object.
+}
+\description{
+groups.trash is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.untrash}
+\alias{groups.untrash}
+\title{groups.untrash is a method defined in Arvados class.}
+\usage{
+arv$groups.untrash(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Group object.
+}
+\description{
+groups.untrash is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{groups.update}
+\alias{groups.update}
+\title{groups.update is a method defined in Arvados class.}
+\usage{
+arv$groups.update(group, uuid)
+}
+\arguments{
+\item{group}{Group object.}
+
+\item{uuid}{The UUID of the Group in question.}
+}
+\value{
+Group object.
+}
+\description{
+groups.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{humans.create}
+\alias{humans.create}
+\title{humans.create is a method defined in Arvados class.}
+\usage{
+arv$humans.create(human, ensure_unique_name = "false")
+}
+\arguments{
+\item{human}{Human object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Human object.
+}
+\description{
+humans.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{humans.delete}
+\alias{humans.delete}
+\title{humans.delete is a method defined in Arvados class.}
+\usage{
+arv$humans.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Human in question.}
+}
+\value{
+Human object.
+}
+\description{
+humans.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{humans.destroy}
+\alias{humans.destroy}
+\title{humans.destroy is a method defined in Arvados class.}
+\usage{
+arv$humans.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Human object.
+}
+\description{
+humans.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{humans.get}
+\alias{humans.get}
+\title{humans.get is a method defined in Arvados class.}
+\usage{
+arv$humans.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Human in question.}
+}
+\value{
+Human object.
+}
+\description{
+humans.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{humans.index}
+\alias{humans.index}
+\title{humans.index is a method defined in Arvados class.}
+\usage{
+arv$humans.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+HumanList object.
+}
+\description{
+humans.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{humans.list}
+\alias{humans.list}
+\title{humans.list is a method defined in Arvados class.}
+\usage{
+arv$humans.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+HumanList object.
+}
+\description{
+humans.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{humans.show}
+\alias{humans.show}
+\title{humans.show is a method defined in Arvados class.}
+\usage{
+arv$humans.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Human object.
+}
+\description{
+humans.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{humans.update}
+\alias{humans.update}
+\title{humans.update is a method defined in Arvados class.}
+\usage{
+arv$humans.update(human, uuid)
+}
+\arguments{
+\item{human}{Human object.}
+
+\item{uuid}{The UUID of the Human in question.}
+}
+\value{
+Human object.
+}
+\description{
+humans.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{job_tasks.create}
+\alias{job_tasks.create}
+\title{job_tasks.create is a method defined in Arvados class.}
+\usage{
+arv$job_tasks.create(job_task,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{jobTask}{JobTask object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+JobTask object.
+}
+\description{
+job_tasks.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{job_tasks.delete}
+\alias{job_tasks.delete}
+\title{job_tasks.delete is a method defined in Arvados class.}
+\usage{
+arv$job_tasks.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the JobTask in question.}
+}
+\value{
+JobTask object.
+}
+\description{
+job_tasks.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{job_tasks.destroy}
+\alias{job_tasks.destroy}
+\title{job_tasks.destroy is a method defined in Arvados class.}
+\usage{
+arv$job_tasks.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+JobTask object.
+}
+\description{
+job_tasks.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{job_tasks.get}
+\alias{job_tasks.get}
+\title{job_tasks.get is a method defined in Arvados class.}
+\usage{
+arv$job_tasks.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the JobTask in question.}
+}
+\value{
+JobTask object.
+}
+\description{
+job_tasks.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{job_tasks.index}
+\alias{job_tasks.index}
+\title{job_tasks.index is a method defined in Arvados class.}
+\usage{
+arv$job_tasks.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+JobTaskList object.
+}
+\description{
+job_tasks.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{job_tasks.list}
+\alias{job_tasks.list}
+\title{job_tasks.list is a method defined in Arvados class.}
+\usage{
+arv$job_tasks.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+JobTaskList object.
+}
+\description{
+job_tasks.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{job_tasks.show}
+\alias{job_tasks.show}
+\title{job_tasks.show is a method defined in Arvados class.}
+\usage{
+arv$job_tasks.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+JobTask object.
+}
+\description{
+job_tasks.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{job_tasks.update}
+\alias{job_tasks.update}
+\title{job_tasks.update is a method defined in Arvados class.}
+\usage{
+arv$job_tasks.update(job_task,
+ uuid)
+}
+\arguments{
+\item{jobTask}{JobTask object.}
+
+\item{uuid}{The UUID of the JobTask in question.}
+}
+\value{
+JobTask object.
+}
+\description{
+job_tasks.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.cancel}
+\alias{jobs.cancel}
+\title{jobs.cancel is a method defined in Arvados class.}
+\usage{
+arv$jobs.cancel(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Job object.
+}
+\description{
+jobs.cancel is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.create}
+\alias{jobs.create}
+\title{jobs.create is a method defined in Arvados class.}
+\usage{
+arv$jobs.create(job, ensure_unique_name = "false",
+ find_or_create = "false", filters = NULL,
+ minimum_script_version = NULL, exclude_script_versions = NULL)
+}
+\arguments{
+\item{job}{Job object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+
+\item{find_or_create}{}
+
+\item{filters}{}
+
+\item{minimum_script_version}{}
+
+\item{exclude_script_versions}{}
+}
+\value{
+Job object.
+}
+\description{
+jobs.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.delete}
+\alias{jobs.delete}
+\title{jobs.delete is a method defined in Arvados class.}
+\usage{
+arv$jobs.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Job in question.}
+}
+\value{
+Job object.
+}
+\description{
+jobs.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.destroy}
+\alias{jobs.destroy}
+\title{jobs.destroy is a method defined in Arvados class.}
+\usage{
+arv$jobs.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Job object.
+}
+\description{
+jobs.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.get}
+\alias{jobs.get}
+\title{jobs.get is a method defined in Arvados class.}
+\usage{
+arv$jobs.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Job in question.}
+}
+\value{
+Job object.
+}
+\description{
+jobs.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.index}
+\alias{jobs.index}
+\title{jobs.index is a method defined in Arvados class.}
+\usage{
+arv$jobs.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+JobList object.
+}
+\description{
+jobs.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.list}
+\alias{jobs.list}
+\title{jobs.list is a method defined in Arvados class.}
+\usage{
+arv$jobs.list(filters = NULL, where = NULL,
+ order = NULL, select = NULL, distinct = NULL,
+ limit = "100", offset = "0", count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+JobList object.
+}
+\description{
+jobs.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.lock}
+\alias{jobs.lock}
+\title{jobs.lock is a method defined in Arvados class.}
+\usage{
+arv$jobs.lock(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Job object.
+}
+\description{
+jobs.lock is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.queue}
+\alias{jobs.queue}
+\title{jobs.queue is a method defined in Arvados class.}
+\usage{
+arv$jobs.queue(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+Job object.
+}
+\description{
+jobs.queue is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.queue_size}
+\alias{jobs.queue_size}
+\title{jobs.queue_size is a method defined in Arvados class.}
+\usage{
+arv$jobs.queue_size(NULL)
+}
+\value{
+Job object.
+}
+\description{
+jobs.queue_size is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.show}
+\alias{jobs.show}
+\title{jobs.show is a method defined in Arvados class.}
+\usage{
+arv$jobs.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Job object.
+}
+\description{
+jobs.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{jobs.update}
+\alias{jobs.update}
+\title{jobs.update is a method defined in Arvados class.}
+\usage{
+arv$jobs.update(job, uuid)
+}
+\arguments{
+\item{job}{Job object.}
+
+\item{uuid}{The UUID of the Job in question.}
+}
+\value{
+Job object.
+}
+\description{
+jobs.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_disks.create}
+\alias{keep_disks.create}
+\title{keep_disks.create is a method defined in Arvados class.}
+\usage{
+arv$keep_disks.create(keep_disk,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{keepDisk}{KeepDisk object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+KeepDisk object.
+}
+\description{
+keep_disks.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_disks.delete}
+\alias{keep_disks.delete}
+\title{keep_disks.delete is a method defined in Arvados class.}
+\usage{
+arv$keep_disks.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the KeepDisk in question.}
+}
+\value{
+KeepDisk object.
+}
+\description{
+keep_disks.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_disks.destroy}
+\alias{keep_disks.destroy}
+\title{keep_disks.destroy is a method defined in Arvados class.}
+\usage{
+arv$keep_disks.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+KeepDisk object.
+}
+\description{
+keep_disks.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_disks.get}
+\alias{keep_disks.get}
+\title{keep_disks.get is a method defined in Arvados class.}
+\usage{
+arv$keep_disks.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the KeepDisk in question.}
+}
+\value{
+KeepDisk object.
+}
+\description{
+keep_disks.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_disks.index}
+\alias{keep_disks.index}
+\title{keep_disks.index is a method defined in Arvados class.}
+\usage{
+arv$keep_disks.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+KeepDiskList object.
+}
+\description{
+keep_disks.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_disks.list}
+\alias{keep_disks.list}
+\title{keep_disks.list is a method defined in Arvados class.}
+\usage{
+arv$keep_disks.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+KeepDiskList object.
+}
+\description{
+keep_disks.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_disks.ping}
+\alias{keep_disks.ping}
+\title{keep_disks.ping is a method defined in Arvados class.}
+\usage{
+arv$keep_disks.ping(uuid = NULL,
+ ping_secret, node_uuid = NULL, filesystem_uuid = NULL,
+ service_host = NULL, service_port, service_ssl_flag)
+}
+\arguments{
+\item{uuid}{}
+
+\item{ping_secret}{}
+
+\item{node_uuid}{}
+
+\item{filesystem_uuid}{}
+
+\item{service_host}{}
+
+\item{service_port}{}
+
+\item{service_ssl_flag}{}
+}
+\value{
+KeepDisk object.
+}
+\description{
+keep_disks.ping is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_disks.show}
+\alias{keep_disks.show}
+\title{keep_disks.show is a method defined in Arvados class.}
+\usage{
+arv$keep_disks.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+KeepDisk object.
+}
+\description{
+keep_disks.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_disks.update}
+\alias{keep_disks.update}
+\title{keep_disks.update is a method defined in Arvados class.}
+\usage{
+arv$keep_disks.update(keep_disk,
+ uuid)
+}
+\arguments{
+\item{keepDisk}{KeepDisk object.}
+
+\item{uuid}{The UUID of the KeepDisk in question.}
+}
+\value{
+KeepDisk object.
+}
+\description{
+keep_disks.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_services.accessible}
+\alias{keep_services.accessible}
+\title{keep_services.accessible is a method defined in Arvados class.}
+\usage{
+arv$keep_services.accessible(NULL)
+}
+\value{
+KeepService object.
+}
+\description{
+keep_services.accessible is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_services.create}
+\alias{keep_services.create}
+\title{keep_services.create is a method defined in Arvados class.}
+\usage{
+arv$keep_services.create(keep_service,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{keepService}{KeepService object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+KeepService object.
+}
+\description{
+keep_services.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_services.delete}
+\alias{keep_services.delete}
+\title{keep_services.delete is a method defined in Arvados class.}
+\usage{
+arv$keep_services.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the KeepService in question.}
+}
+\value{
+KeepService object.
+}
+\description{
+keep_services.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_services.destroy}
+\alias{keep_services.destroy}
+\title{keep_services.destroy is a method defined in Arvados class.}
+\usage{
+arv$keep_services.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+KeepService object.
+}
+\description{
+keep_services.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_services.get}
+\alias{keep_services.get}
+\title{keep_services.get is a method defined in Arvados class.}
+\usage{
+arv$keep_services.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the KeepService in question.}
+}
+\value{
+KeepService object.
+}
+\description{
+keep_services.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_services.index}
+\alias{keep_services.index}
+\title{keep_services.index is a method defined in Arvados class.}
+\usage{
+arv$keep_services.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+KeepServiceList object.
+}
+\description{
+keep_services.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_services.list}
+\alias{keep_services.list}
+\title{keep_services.list is a method defined in Arvados class.}
+\usage{
+arv$keep_services.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+KeepServiceList object.
+}
+\description{
+keep_services.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_services.show}
+\alias{keep_services.show}
+\title{keep_services.show is a method defined in Arvados class.}
+\usage{
+arv$keep_services.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+KeepService object.
+}
+\description{
+keep_services.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{keep_services.update}
+\alias{keep_services.update}
+\title{keep_services.update is a method defined in Arvados class.}
+\usage{
+arv$keep_services.update(keep_service,
+ uuid)
+}
+\arguments{
+\item{keepService}{KeepService object.}
+
+\item{uuid}{The UUID of the KeepService in question.}
+}
+\value{
+KeepService object.
+}
+\description{
+keep_services.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{links.create}
+\alias{links.create}
+\title{links.create is a method defined in Arvados class.}
+\usage{
+arv$links.create(link, ensure_unique_name = "false")
+}
+\arguments{
+\item{link}{Link object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Link object.
+}
+\description{
+links.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{links.delete}
+\alias{links.delete}
+\title{links.delete is a method defined in Arvados class.}
+\usage{
+arv$links.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Link in question.}
+}
+\value{
+Link object.
+}
+\description{
+links.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{links.destroy}
+\alias{links.destroy}
+\title{links.destroy is a method defined in Arvados class.}
+\usage{
+arv$links.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Link object.
+}
+\description{
+links.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{links.get}
+\alias{links.get}
+\title{links.get is a method defined in Arvados class.}
+\usage{
+arv$links.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Link in question.}
+}
+\value{
+Link object.
+}
+\description{
+links.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{links.get_permissions}
+\alias{links.get_permissions}
+\title{links.get_permissions is a method defined in Arvados class.}
+\usage{
+arv$links.get_permissions(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Link object.
+}
+\description{
+links.get_permissions is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{links.index}
+\alias{links.index}
+\title{links.index is a method defined in Arvados class.}
+\usage{
+arv$links.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+LinkList object.
+}
+\description{
+links.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{links.list}
+\alias{links.list}
+\title{links.list is a method defined in Arvados class.}
+\usage{
+arv$links.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+LinkList object.
+}
+\description{
+links.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{links.show}
+\alias{links.show}
+\title{links.show is a method defined in Arvados class.}
+\usage{
+arv$links.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Link object.
+}
+\description{
+links.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{links.update}
+\alias{links.update}
+\title{links.update is a method defined in Arvados class.}
+\usage{
+arv$links.update(link, uuid)
+}
+\arguments{
+\item{link}{Link object.}
+
+\item{uuid}{The UUID of the Link in question.}
+}
+\value{
+Link object.
+}
+\description{
+links.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{logs.create}
+\alias{logs.create}
+\title{logs.create is a method defined in Arvados class.}
+\usage{
+arv$logs.create(log, ensure_unique_name = "false")
+}
+\arguments{
+\item{log}{Log object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Log object.
+}
+\description{
+logs.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{logs.delete}
+\alias{logs.delete}
+\title{logs.delete is a method defined in Arvados class.}
+\usage{
+arv$logs.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Log in question.}
+}
+\value{
+Log object.
+}
+\description{
+logs.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{logs.destroy}
+\alias{logs.destroy}
+\title{logs.destroy is a method defined in Arvados class.}
+\usage{
+arv$logs.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Log object.
+}
+\description{
+logs.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{logs.get}
+\alias{logs.get}
+\title{logs.get is a method defined in Arvados class.}
+\usage{
+arv$logs.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Log in question.}
+}
+\value{
+Log object.
+}
+\description{
+logs.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{logs.index}
+\alias{logs.index}
+\title{logs.index is a method defined in Arvados class.}
+\usage{
+arv$logs.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+LogList object.
+}
+\description{
+logs.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{logs.list}
+\alias{logs.list}
+\title{logs.list is a method defined in Arvados class.}
+\usage{
+arv$logs.list(filters = NULL, where = NULL,
+ order = NULL, select = NULL, distinct = NULL,
+ limit = "100", offset = "0", count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+LogList object.
+}
+\description{
+logs.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{logs.show}
+\alias{logs.show}
+\title{logs.show is a method defined in Arvados class.}
+\usage{
+arv$logs.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Log object.
+}
+\description{
+logs.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{logs.update}
+\alias{logs.update}
+\title{logs.update is a method defined in Arvados class.}
+\usage{
+arv$logs.update(log, uuid)
+}
+\arguments{
+\item{log}{Log object.}
+
+\item{uuid}{The UUID of the Log in question.}
+}
+\value{
+Log object.
+}
+\description{
+logs.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{nodes.create}
+\alias{nodes.create}
+\title{nodes.create is a method defined in Arvados class.}
+\usage{
+arv$nodes.create(node, ensure_unique_name = "false",
+ assign_slot = NULL)
+}
+\arguments{
+\item{node}{Node object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+
+\item{assign_slot}{assign slot and hostname}
+}
+\value{
+Node object.
+}
+\description{
+nodes.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{nodes.delete}
+\alias{nodes.delete}
+\title{nodes.delete is a method defined in Arvados class.}
+\usage{
+arv$nodes.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Node in question.}
+}
+\value{
+Node object.
+}
+\description{
+nodes.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{nodes.destroy}
+\alias{nodes.destroy}
+\title{nodes.destroy is a method defined in Arvados class.}
+\usage{
+arv$nodes.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Node object.
+}
+\description{
+nodes.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{nodes.get}
+\alias{nodes.get}
+\title{nodes.get is a method defined in Arvados class.}
+\usage{
+arv$nodes.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Node in question.}
+}
+\value{
+Node object.
+}
+\description{
+nodes.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{nodes.index}
+\alias{nodes.index}
+\title{nodes.index is a method defined in Arvados class.}
+\usage{
+arv$nodes.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+NodeList object.
+}
+\description{
+nodes.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{nodes.list}
+\alias{nodes.list}
+\title{nodes.list is a method defined in Arvados class.}
+\usage{
+arv$nodes.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+NodeList object.
+}
+\description{
+nodes.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{nodes.ping}
+\alias{nodes.ping}
+\title{nodes.ping is a method defined in Arvados class.}
+\usage{
+arv$nodes.ping(uuid, ping_secret)
+}
+\arguments{
+\item{uuid}{}
+
+\item{ping_secret}{}
+}
+\value{
+Node object.
+}
+\description{
+nodes.ping is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{nodes.show}
+\alias{nodes.show}
+\title{nodes.show is a method defined in Arvados class.}
+\usage{
+arv$nodes.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Node object.
+}
+\description{
+nodes.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{nodes.update}
+\alias{nodes.update}
+\title{nodes.update is a method defined in Arvados class.}
+\usage{
+arv$nodes.update(node, uuid, assign_slot = NULL)
+}
+\arguments{
+\item{node}{Node object.}
+
+\item{uuid}{The UUID of the Node in question.}
+
+\item{assign_slot}{assign slot and hostname}
+}
+\value{
+Node object.
+}
+\description{
+nodes.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_instances.cancel}
+\alias{pipeline_instances.cancel}
+\title{pipeline_instances.cancel is a method defined in Arvados class.}
+\usage{
+arv$pipeline_instances.cancel(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+PipelineInstance object.
+}
+\description{
+pipeline_instances.cancel is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_instances.create}
+\alias{pipeline_instances.create}
+\title{pipeline_instances.create is a method defined in Arvados class.}
+\usage{
+arv$pipeline_instances.create(pipeline_instance,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{pipelineInstance}{PipelineInstance object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+PipelineInstance object.
+}
+\description{
+pipeline_instances.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_instances.delete}
+\alias{pipeline_instances.delete}
+\title{pipeline_instances.delete is a method defined in Arvados class.}
+\usage{
+arv$pipeline_instances.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the PipelineInstance in question.}
+}
+\value{
+PipelineInstance object.
+}
+\description{
+pipeline_instances.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_instances.destroy}
+\alias{pipeline_instances.destroy}
+\title{pipeline_instances.destroy is a method defined in Arvados class.}
+\usage{
+arv$pipeline_instances.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+PipelineInstance object.
+}
+\description{
+pipeline_instances.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_instances.get}
+\alias{pipeline_instances.get}
+\title{pipeline_instances.get is a method defined in Arvados class.}
+\usage{
+arv$pipeline_instances.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the PipelineInstance in question.}
+}
+\value{
+PipelineInstance object.
+}
+\description{
+pipeline_instances.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_instances.index}
+\alias{pipeline_instances.index}
+\title{pipeline_instances.index is a method defined in Arvados class.}
+\usage{
+arv$pipeline_instances.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+PipelineInstanceList object.
+}
+\description{
+pipeline_instances.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_instances.list}
+\alias{pipeline_instances.list}
+\title{pipeline_instances.list is a method defined in Arvados class.}
+\usage{
+arv$pipeline_instances.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+PipelineInstanceList object.
+}
+\description{
+pipeline_instances.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_instances.show}
+\alias{pipeline_instances.show}
+\title{pipeline_instances.show is a method defined in Arvados class.}
+\usage{
+arv$pipeline_instances.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+PipelineInstance object.
+}
+\description{
+pipeline_instances.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_instances.update}
+\alias{pipeline_instances.update}
+\title{pipeline_instances.update is a method defined in Arvados class.}
+\usage{
+arv$pipeline_instances.update(pipeline_instance,
+ uuid)
+}
+\arguments{
+\item{pipelineInstance}{PipelineInstance object.}
+
+\item{uuid}{The UUID of the PipelineInstance in question.}
+}
+\value{
+PipelineInstance object.
+}
+\description{
+pipeline_instances.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_templates.create}
+\alias{pipeline_templates.create}
+\title{pipeline_templates.create is a method defined in Arvados class.}
+\usage{
+arv$pipeline_templates.create(pipeline_template,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{pipelineTemplate}{PipelineTemplate object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+PipelineTemplate object.
+}
+\description{
+pipeline_templates.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_templates.delete}
+\alias{pipeline_templates.delete}
+\title{pipeline_templates.delete is a method defined in Arvados class.}
+\usage{
+arv$pipeline_templates.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the PipelineTemplate in question.}
+}
+\value{
+PipelineTemplate object.
+}
+\description{
+pipeline_templates.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_templates.destroy}
+\alias{pipeline_templates.destroy}
+\title{pipeline_templates.destroy is a method defined in Arvados class.}
+\usage{
+arv$pipeline_templates.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+PipelineTemplate object.
+}
+\description{
+pipeline_templates.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_templates.get}
+\alias{pipeline_templates.get}
+\title{pipeline_templates.get is a method defined in Arvados class.}
+\usage{
+arv$pipeline_templates.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the PipelineTemplate in question.}
+}
+\value{
+PipelineTemplate object.
+}
+\description{
+pipeline_templates.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_templates.index}
+\alias{pipeline_templates.index}
+\title{pipeline_templates.index is a method defined in Arvados class.}
+\usage{
+arv$pipeline_templates.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+PipelineTemplateList object.
+}
+\description{
+pipeline_templates.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_templates.list}
+\alias{pipeline_templates.list}
+\title{pipeline_templates.list is a method defined in Arvados class.}
+\usage{
+arv$pipeline_templates.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+PipelineTemplateList object.
+}
+\description{
+pipeline_templates.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_templates.show}
+\alias{pipeline_templates.show}
+\title{pipeline_templates.show is a method defined in Arvados class.}
+\usage{
+arv$pipeline_templates.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+PipelineTemplate object.
+}
+\description{
+pipeline_templates.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{pipeline_templates.update}
+\alias{pipeline_templates.update}
+\title{pipeline_templates.update is a method defined in Arvados class.}
+\usage{
+arv$pipeline_templates.update(pipeline_template,
+ uuid)
+}
+\arguments{
+\item{pipelineTemplate}{PipelineTemplate object.}
+
+\item{uuid}{The UUID of the PipelineTemplate in question.}
+}
+\value{
+PipelineTemplate object.
+}
+\description{
+pipeline_templates.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{repositories.create}
+\alias{repositories.create}
+\title{repositories.create is a method defined in Arvados class.}
+\usage{
+arv$repositories.create(repository,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{repository}{Repository object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Repository object.
+}
+\description{
+repositories.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{repositories.delete}
+\alias{repositories.delete}
+\title{repositories.delete is a method defined in Arvados class.}
+\usage{
+arv$repositories.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Repository in question.}
+}
+\value{
+Repository object.
+}
+\description{
+repositories.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{repositories.destroy}
+\alias{repositories.destroy}
+\title{repositories.destroy is a method defined in Arvados class.}
+\usage{
+arv$repositories.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Repository object.
+}
+\description{
+repositories.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{repositories.get}
+\alias{repositories.get}
+\title{repositories.get is a method defined in Arvados class.}
+\usage{
+arv$repositories.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Repository in question.}
+}
+\value{
+Repository object.
+}
+\description{
+repositories.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{repositories.get_all_permissions}
+\alias{repositories.get_all_permissions}
+\title{repositories.get_all_permissions is a method defined in Arvados class.}
+\usage{
+arv$repositories.get_all_permissions(NULL)
+}
+\value{
+Repository object.
+}
+\description{
+repositories.get_all_permissions is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{repositories.index}
+\alias{repositories.index}
+\title{repositories.index is a method defined in Arvados class.}
+\usage{
+arv$repositories.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+RepositoryList object.
+}
+\description{
+repositories.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{repositories.list}
+\alias{repositories.list}
+\title{repositories.list is a method defined in Arvados class.}
+\usage{
+arv$repositories.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+RepositoryList object.
+}
+\description{
+repositories.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{repositories.show}
+\alias{repositories.show}
+\title{repositories.show is a method defined in Arvados class.}
+\usage{
+arv$repositories.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Repository object.
+}
+\description{
+repositories.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{repositories.update}
+\alias{repositories.update}
+\title{repositories.update is a method defined in Arvados class.}
+\usage{
+arv$repositories.update(repository,
+ uuid)
+}
+\arguments{
+\item{repository}{Repository object.}
+
+\item{uuid}{The UUID of the Repository in question.}
+}
+\value{
+Repository object.
+}
+\description{
+repositories.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{specimens.create}
+\alias{specimens.create}
+\title{specimens.create is a method defined in Arvados class.}
+\usage{
+arv$specimens.create(specimen,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{specimen}{Specimen object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Specimen object.
+}
+\description{
+specimens.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{specimens.delete}
+\alias{specimens.delete}
+\title{specimens.delete is a method defined in Arvados class.}
+\usage{
+arv$specimens.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Specimen in question.}
+}
+\value{
+Specimen object.
+}
+\description{
+specimens.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{specimens.destroy}
+\alias{specimens.destroy}
+\title{specimens.destroy is a method defined in Arvados class.}
+\usage{
+arv$specimens.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Specimen object.
+}
+\description{
+specimens.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{specimens.get}
+\alias{specimens.get}
+\title{specimens.get is a method defined in Arvados class.}
+\usage{
+arv$specimens.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Specimen in question.}
+}
+\value{
+Specimen object.
+}
+\description{
+specimens.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{specimens.index}
+\alias{specimens.index}
+\title{specimens.index is a method defined in Arvados class.}
+\usage{
+arv$specimens.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+SpecimenList object.
+}
+\description{
+specimens.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{specimens.list}
+\alias{specimens.list}
+\title{specimens.list is a method defined in Arvados class.}
+\usage{
+arv$specimens.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+SpecimenList object.
+}
+\description{
+specimens.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{specimens.show}
+\alias{specimens.show}
+\title{specimens.show is a method defined in Arvados class.}
+\usage{
+arv$specimens.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Specimen object.
+}
+\description{
+specimens.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{specimens.update}
+\alias{specimens.update}
+\title{specimens.update is a method defined in Arvados class.}
+\usage{
+arv$specimens.update(specimen,
+ uuid)
+}
+\arguments{
+\item{specimen}{Specimen object.}
+
+\item{uuid}{The UUID of the Specimen in question.}
+}
+\value{
+Specimen object.
+}
+\description{
+specimens.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{traits.create}
+\alias{traits.create}
+\title{traits.create is a method defined in Arvados class.}
+\usage{
+arv$traits.create(trait, ensure_unique_name = "false")
+}
+\arguments{
+\item{trait}{Trait object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Trait object.
+}
+\description{
+traits.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{traits.delete}
+\alias{traits.delete}
+\title{traits.delete is a method defined in Arvados class.}
+\usage{
+arv$traits.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Trait in question.}
+}
+\value{
+Trait object.
+}
+\description{
+traits.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{traits.destroy}
+\alias{traits.destroy}
+\title{traits.destroy is a method defined in Arvados class.}
+\usage{
+arv$traits.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Trait object.
+}
+\description{
+traits.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{traits.get}
+\alias{traits.get}
+\title{traits.get is a method defined in Arvados class.}
+\usage{
+arv$traits.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Trait in question.}
+}
+\value{
+Trait object.
+}
+\description{
+traits.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{traits.index}
+\alias{traits.index}
+\title{traits.index is a method defined in Arvados class.}
+\usage{
+arv$traits.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+TraitList object.
+}
+\description{
+traits.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{traits.list}
+\alias{traits.list}
+\title{traits.list is a method defined in Arvados class.}
+\usage{
+arv$traits.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+TraitList object.
+}
+\description{
+traits.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{traits.show}
+\alias{traits.show}
+\title{traits.show is a method defined in Arvados class.}
+\usage{
+arv$traits.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Trait object.
+}
+\description{
+traits.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{traits.update}
+\alias{traits.update}
+\title{traits.update is a method defined in Arvados class.}
+\usage{
+arv$traits.update(trait, uuid)
+}
+\arguments{
+\item{trait}{Trait object.}
+
+\item{uuid}{The UUID of the Trait in question.}
+}
+\value{
+Trait object.
+}
+\description{
+traits.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.create}
+\alias{user_agreements.create}
+\title{user_agreements.create is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.create(user_agreement,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{userAgreement}{UserAgreement object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+UserAgreement object.
+}
+\description{
+user_agreements.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.delete}
+\alias{user_agreements.delete}
+\title{user_agreements.delete is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the UserAgreement in question.}
+}
+\value{
+UserAgreement object.
+}
+\description{
+user_agreements.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.destroy}
+\alias{user_agreements.destroy}
+\title{user_agreements.destroy is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+UserAgreement object.
+}
+\description{
+user_agreements.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.get}
+\alias{user_agreements.get}
+\title{user_agreements.get is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the UserAgreement in question.}
+}
+\value{
+UserAgreement object.
+}
+\description{
+user_agreements.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.index}
+\alias{user_agreements.index}
+\title{user_agreements.index is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+UserAgreementList object.
+}
+\description{
+user_agreements.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.list}
+\alias{user_agreements.list}
+\title{user_agreements.list is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+UserAgreementList object.
+}
+\description{
+user_agreements.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.new}
+\alias{user_agreements.new}
+\title{user_agreements.new is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.new(NULL)
+}
+\value{
+UserAgreement object.
+}
+\description{
+user_agreements.new is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.show}
+\alias{user_agreements.show}
+\title{user_agreements.show is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+UserAgreement object.
+}
+\description{
+user_agreements.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.sign}
+\alias{user_agreements.sign}
+\title{user_agreements.sign is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.sign(NULL)
+}
+\value{
+UserAgreement object.
+}
+\description{
+user_agreements.sign is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.signatures}
+\alias{user_agreements.signatures}
+\title{user_agreements.signatures is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.signatures(NULL)
+}
+\value{
+UserAgreement object.
+}
+\description{
+user_agreements.signatures is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{user_agreements.update}
+\alias{user_agreements.update}
+\title{user_agreements.update is a method defined in Arvados class.}
+\usage{
+arv$user_agreements.update(user_agreement,
+ uuid)
+}
+\arguments{
+\item{userAgreement}{UserAgreement object.}
+
+\item{uuid}{The UUID of the UserAgreement in question.}
+}
+\value{
+UserAgreement object.
+}
+\description{
+user_agreements.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.activate}
+\alias{users.activate}
+\title{users.activate is a method defined in Arvados class.}
+\usage{
+arv$users.activate(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+User object.
+}
+\description{
+users.activate is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.create}
+\alias{users.create}
+\title{users.create is a method defined in Arvados class.}
+\usage{
+arv$users.create(user, ensure_unique_name = "false")
+}
+\arguments{
+\item{user}{User object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+User object.
+}
+\description{
+users.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.current}
+\alias{users.current}
+\title{users.current is a method defined in Arvados class.}
+\usage{
+arv$users.current(NULL)
+}
+\value{
+User object.
+}
+\description{
+users.current is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.delete}
+\alias{users.delete}
+\title{users.delete is a method defined in Arvados class.}
+\usage{
+arv$users.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the User in question.}
+}
+\value{
+User object.
+}
+\description{
+users.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.destroy}
+\alias{users.destroy}
+\title{users.destroy is a method defined in Arvados class.}
+\usage{
+arv$users.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+User object.
+}
+\description{
+users.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.get}
+\alias{users.get}
+\title{users.get is a method defined in Arvados class.}
+\usage{
+arv$users.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the User in question.}
+}
+\value{
+User object.
+}
+\description{
+users.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.index}
+\alias{users.index}
+\title{users.index is a method defined in Arvados class.}
+\usage{
+arv$users.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+UserList object.
+}
+\description{
+users.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.list}
+\alias{users.list}
+\title{users.list is a method defined in Arvados class.}
+\usage{
+arv$users.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+UserList object.
+}
+\description{
+users.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.setup}
+\alias{users.setup}
+\title{users.setup is a method defined in Arvados class.}
+\usage{
+arv$users.setup(user = NULL, openid_prefix = NULL,
+ repo_name = NULL, vm_uuid = NULL, send_notification_email = "false")
+}
+\arguments{
+\item{user}{}
+
+\item{openid_prefix}{}
+
+\item{repo_name}{}
+
+\item{vm_uuid}{}
+
+\item{send_notification_email}{}
+}
+\value{
+User object.
+}
+\description{
+users.setup is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.show}
+\alias{users.show}
+\title{users.show is a method defined in Arvados class.}
+\usage{
+arv$users.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+User object.
+}
+\description{
+users.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.system}
+\alias{users.system}
+\title{users.system is a method defined in Arvados class.}
+\usage{
+arv$users.system(NULL)
+}
+\value{
+User object.
+}
+\description{
+users.system is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.unsetup}
+\alias{users.unsetup}
+\title{users.unsetup is a method defined in Arvados class.}
+\usage{
+arv$users.unsetup(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+User object.
+}
+\description{
+users.unsetup is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.update}
+\alias{users.update}
+\title{users.update is a method defined in Arvados class.}
+\usage{
+arv$users.update(user, uuid)
+}
+\arguments{
+\item{user}{User object.}
+
+\item{uuid}{The UUID of the User in question.}
+}
+\value{
+User object.
+}
+\description{
+users.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{users.update_uuid}
+\alias{users.update_uuid}
+\title{users.update_uuid is a method defined in Arvados class.}
+\usage{
+arv$users.update_uuid(uuid, new_uuid)
+}
+\arguments{
+\item{uuid}{}
+
+\item{new_uuid}{}
+}
+\value{
+User object.
+}
+\description{
+users.update_uuid is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.create}
+\alias{virtual_machines.create}
+\title{virtual_machines.create is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.create(virtual_machine,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{virtualMachine}{VirtualMachine object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+VirtualMachine object.
+}
+\description{
+virtual_machines.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.delete}
+\alias{virtual_machines.delete}
+\title{virtual_machines.delete is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the VirtualMachine in question.}
+}
+\value{
+VirtualMachine object.
+}
+\description{
+virtual_machines.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.destroy}
+\alias{virtual_machines.destroy}
+\title{virtual_machines.destroy is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+VirtualMachine object.
+}
+\description{
+virtual_machines.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.get}
+\alias{virtual_machines.get}
+\title{virtual_machines.get is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the VirtualMachine in question.}
+}
+\value{
+VirtualMachine object.
+}
+\description{
+virtual_machines.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.get_all_logins}
+\alias{virtual_machines.get_all_logins}
+\title{virtual_machines.get_all_logins is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.get_all_logins(NULL)
+}
+\value{
+VirtualMachine object.
+}
+\description{
+virtual_machines.get_all_logins is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.index}
+\alias{virtual_machines.index}
+\title{virtual_machines.index is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+VirtualMachineList object.
+}
+\description{
+virtual_machines.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.list}
+\alias{virtual_machines.list}
+\title{virtual_machines.list is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+VirtualMachineList object.
+}
+\description{
+virtual_machines.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.logins}
+\alias{virtual_machines.logins}
+\title{virtual_machines.logins is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.logins(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+VirtualMachine object.
+}
+\description{
+virtual_machines.logins is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.show}
+\alias{virtual_machines.show}
+\title{virtual_machines.show is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+VirtualMachine object.
+}
+\description{
+virtual_machines.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{virtual_machines.update}
+\alias{virtual_machines.update}
+\title{virtual_machines.update is a method defined in Arvados class.}
+\usage{
+arv$virtual_machines.update(virtual_machine,
+ uuid)
+}
+\arguments{
+\item{virtualMachine}{VirtualMachine object.}
+
+\item{uuid}{The UUID of the VirtualMachine in question.}
+}
+\value{
+VirtualMachine object.
+}
+\description{
+virtual_machines.update is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{workflows.create}
+\alias{workflows.create}
+\title{workflows.create is a method defined in Arvados class.}
+\usage{
+arv$workflows.create(workflow,
+ ensure_unique_name = "false")
+}
+\arguments{
+\item{workflow}{Workflow object.}
+
+\item{ensure_unique_name}{Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.}
+}
+\value{
+Workflow object.
+}
+\description{
+workflows.create is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{workflows.delete}
+\alias{workflows.delete}
+\title{workflows.delete is a method defined in Arvados class.}
+\usage{
+arv$workflows.delete(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Workflow in question.}
+}
+\value{
+Workflow object.
+}
+\description{
+workflows.delete is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{workflows.destroy}
+\alias{workflows.destroy}
+\title{workflows.destroy is a method defined in Arvados class.}
+\usage{
+arv$workflows.destroy(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Workflow object.
+}
+\description{
+workflows.destroy is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{workflows.get}
+\alias{workflows.get}
+\title{workflows.get is a method defined in Arvados class.}
+\usage{
+arv$workflows.get(uuid)
+}
+\arguments{
+\item{uuid}{The UUID of the Workflow in question.}
+}
+\value{
+Workflow object.
+}
+\description{
+workflows.get is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{workflows.index}
+\alias{workflows.index}
+\title{workflows.index is a method defined in Arvados class.}
+\usage{
+arv$workflows.index(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+WorkflowList object.
+}
+\description{
+workflows.index is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{workflows.list}
+\alias{workflows.list}
+\title{workflows.list is a method defined in Arvados class.}
+\usage{
+arv$workflows.list(filters = NULL,
+ where = NULL, order = NULL, select = NULL,
+ distinct = NULL, limit = "100", offset = "0",
+ count = "exact")
+}
+\arguments{
+\item{filters}{}
+
+\item{where}{}
+
+\item{order}{}
+
+\item{select}{}
+
+\item{distinct}{}
+
+\item{limit}{}
+
+\item{offset}{}
+
+\item{count}{}
+}
+\value{
+WorkflowList object.
+}
+\description{
+workflows.list is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{workflows.show}
+\alias{workflows.show}
+\title{workflows.show is a method defined in Arvados class.}
+\usage{
+arv$workflows.show(uuid)
+}
+\arguments{
+\item{uuid}{}
+}
+\value{
+Workflow object.
+}
+\description{
+workflows.show is a method defined in Arvados class.
+}
--- /dev/null
+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/Arvados.R
+\name{workflows.update}
+\alias{workflows.update}
+\title{workflows.update is a method defined in Arvados class.}
+\usage{
+arv$workflows.update(workflow,
+ uuid)
+}
+\arguments{
+\item{workflow}{Workflow object.}
+
+\item{uuid}{The UUID of the Workflow in question.}
+}
+\value{
+Workflow object.
+}
+\description{
+workflows.update is a method defined in Arvados class.
+}
projects / arvados.git / commitdiff