13931: Add dependencies required by latest cwltool

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <pamstutz@veritasgenetics.com>

diff --git a/build/build.list b/build/build.list
index ef6407031c41f286d47ad08e573f3020a48bf9e9..039625ca79b489b92928f52e58fa299fae1ebf8d 100644 (file)
--- a/build/build.list
+++ b/build/build.list
@@ -23,7 +23,7 @@ debian8,debian9,ubuntu1404,ubuntu1604,centos7|pyyaml|3.12|2|python|amd64
 debian8,debian9,ubuntu1404,ubuntu1604,centos7|rdflib|4.2.2|2|python|all
 debian8,debian9,ubuntu1404,centos7|shellescape|3.4.1|2|python|all
 debian8,debian9,ubuntu1404,ubuntu1604,centos7|mistune|0.7.3|2|python|all
-debian8,debian9,ubuntu1404,ubuntu1604,centos7|typing|3.5.3.0|2|python|all
+debian8,debian9,ubuntu1404,ubuntu1604,centos7|typing|3.6.2|2|python|all
 debian8,debian9,ubuntu1404,ubuntu1604,centos7|avro|1.8.1|2|python|all
 debian8,debian9,ubuntu1404,centos7|ruamel.ordereddict|0.4.9|2|python|amd64
 debian8,debian9,ubuntu1404,ubuntu1604,centos7|cachecontrol|0.11.7|2|python|all
@@ -50,3 +50,6 @@ all|futures|3.0.5|2|python|all
 all|future|0.16.0|2|python|all
 all|future|0.16.0|2|python3|all
 all|mypy-extensions|0.3.0|1|python|all
+all|prov|1.5.1|0|python|all
+all|bagit|1.6.4|0|python|all
+all|typing-extensions|3.6.5|0|python|all

diff --git a/build/package-testing/deb-common-test-packages.sh b/build/package-testing/deb-common-test-packages.sh
index b4ea35c574b20a776960aeefad4d4e4d324a347e..e02532cdad2d1f9d7e898c4930d0b6ad04b3dc6a 100755 (executable)
--- a/build/package-testing/deb-common-test-packages.sh
+++ b/build/package-testing/deb-common-test-packages.sh
@@ -27,7 +27,13 @@ cd /tmp/opts
 
 export ARV_PACKAGES_DIR="/arvados/packages/$target"
 
-dpkg-deb -x $(ls -t "$ARV_PACKAGES_DIR/$1"_*.deb | head -n1) .
+if [[ -f "$ARV_PACKAGES_DIR/$1"_*.deb ]] ; then
+    debpkg=$(ls -t "$ARV_PACKAGES_DIR/$1"_*.deb | head -n1)
+else
+    debpkg=$(ls -t "$ARV_PACKAGES_DIR/processed/$1"_*.deb | head -n1)
+fi
+
+dpkg-deb -x $debpkg .
 
 while read so && [ -n "$so" ]; do
     echo