Reorganizing documentation work in progress, checkpointing so that Brett can start...
authorPeter Amstutz <peter.amstutz@curoverse.com>
Tue, 11 Mar 2014 14:52:19 +0000 (10:52 -0400)
committerPeter Amstutz <peter.amstutz@curoverse.com>
Tue, 11 Mar 2014 14:52:19 +0000 (10:52 -0400)
commit88b5b089f38a587292bb68772251b8275c0e27c7
tree86d2c31c0ec6d10f198a39508278efcd0ed79861
parent491f4f3023d0f45be94e5f7091da85094e887212
Reorganizing documentation work in progress, checkpointing so that Brett can start looking through it.
24 files changed:
doc/_config.yml
doc/_includes/_run_md5sum_py.liquid
doc/_includes/_tutorial_hash_script_py.liquid
doc/_layouts/default.html.liquid
doc/user/examples/crunch-examples.html.textile.liquid
doc/user/getting_started/check-environment.html.textile.liquid
doc/user/getting_started/community.html.textile.liquid
doc/user/getting_started/ssh-access.html.textile.liquid
doc/user/getting_started/workbench.html.textile.liquid
doc/user/index.html.textile.liquid
doc/user/reference/api-tokens.html.textile.liquid
doc/user/reference/sdk-cli.html.textile.liquid
doc/user/topics/keep.html.textile.liquid
doc/user/topics/running-pipeline-command-line.html.textile.liquid [new file with mode: 0644]
doc/user/topics/tutorial-gatk-variantfiltration.html.textile.liquid
doc/user/topics/tutorial-job-debug.html.textile.liquid
doc/user/topics/tutorial-job1.html.textile.liquid [moved from doc/user/tutorials/tutorial-job1.html.textile.liquid with 99% similarity]
doc/user/topics/tutorial-parallel.html.textile.liquid
doc/user/topics/tutorial-trait-search.html.textile.liquid [moved from doc/user/tutorials/tutorial-trait-search.html.textile.liquid with 99% similarity]
doc/user/tutorials/running-external-program.html.textile.liquid [moved from doc/user/topics/running-external-program.html.textile.liquid with 68% similarity]
doc/user/tutorials/tutorial-firstscript.html.textile.liquid
doc/user/tutorials/tutorial-keep.html.textile.liquid
doc/user/tutorials/tutorial-new-pipeline.html.textile.liquid
doc/user/tutorials/tutorial-pipeline-workbench.html.textile.liquid