sdk/cwl/test_with_arvbox.sh

   1 #!/bin/sh
   2
   3 if ! which arvbox >/dev/null ; then
   4     export PATH=$PATH:$(readlink -f $(dirname $0)/../../tools/arvbox/bin)
   5 fi
   6
   7 reset_container=1
   8 leave_running=0
   9 config=dev
  10
  11 while test -n "$1" ; do
  12     arg="$1"
  13     case "$arg" in
  14         --no-reset-container)
  15             reset_container=0
  16             shift
  17             ;;
  18         --leave-running)
  19             leave_running=1
  20             shift
  21             ;;
  22         --config)
  23             config=$2
  24             shift ; shift
  25             ;;
  26         -*)
  27             break
  28             ;;
  29     esac
  30 done
  31
  32 if test -z "$ARVBOX_CONTAINER" ; then
  33    export ARVBOX_CONTAINER=cwltest
  34 fi
  35
  36 if test $reset_container = 1 ; then
  37     arvbox reset -f
  38 fi
  39
  40 arvbox start $config
  41
  42 arvbox pipe <<EOF
  43 set -eu -o pipefail
  44
  45 . /usr/local/lib/arvbox/common.sh
  46
  47 cd /usr/src/arvados/sdk/cwl
  48 python setup.py sdist
  49 pip_install \$(ls dist/arvados-cwl-runner-*.tar.gz | tail -n1)
  50
  51 mkdir -p /tmp/cwltest
  52 cd /tmp/cwltest
  53 if ! test -d common-workflow-language ; then
  54   git clone https://github.com/common-workflow-language/common-workflow-language.git
  55 fi
  56 cd common-workflow-language
  57 git pull
  58 export ARVADOS_API_HOST=localhost:8000
  59 export ARVADOS_API_HOST_INSECURE=1
  60 export ARVADOS_API_TOKEN=\$(cat /var/lib/arvados/superuser_token)
  61
  62 arv-keepdocker --pull arvados/jobs
  63
  64 env
  65 exec ./run_test.sh "$@"
  66 EOF
  67
  68 CODE=$?
  69
  70 if test $leave_running = 0 ; then
  71     arvbox stop
  72 fi
  73
  74 exit $CODE