2 # Copyright (C) The Arvados Authors. All rights reserved.
4 # SPDX-License-Identifier: AGPL-3.0
6 . `dirname "$(readlink -f "$0")"`/libcloud-pin.sh
9 . `dirname "$(readlink -f "$0")"`/run-library.sh
11 read -rd "\000" helpmessage <<EOF
12 $(basename $0): Install and test Arvados components.
14 Exit non-zero if any tests fail.
17 $(basename $0) WORKSPACE=/path/to/arvados [options]
21 --skip FOO Do not test the FOO component.
22 --skip sanity Skip initial dev environment sanity checks.
23 --skip install Do not run any install steps. Just run tests.
24 You should provide GOPATH, GEMHOME, and VENVDIR options
25 from a previous invocation if you use this option.
26 --only FOO Do not test anything except the FOO component.
27 --temp DIR Install components and dependencies under DIR instead of
28 making a new temporary directory. Implies --leave-temp.
29 --leave-temp Do not remove GOPATH, virtualenv, and other temp dirs at exit.
30 Instead, show the path to give as --temp to reuse them in
31 subsequent invocations.
32 --repeat N Repeat each install/test step until it succeeds N times.
33 --retry Prompt to retry if an install or test suite fails.
34 --only-install Run specific install step
35 --short Skip (or scale down) some slow tests.
36 --interactive Set up, then prompt for test/install steps to perform.
37 WORKSPACE=path Arvados source tree to test.
38 CONFIGSRC=path Dir with config.yml file containing PostgreSQL section for use by tests. (required)
39 services/api_test="TEST=test/functional/arvados/v1/collections_controller_test.rb"
40 Restrict apiserver tests to the given file
41 sdk/python_test="--test-suite tests.test_keep_locator"
42 Restrict Python SDK tests to the given class
43 apps/workbench_test="TEST=test/integration/pipeline_instances_test.rb"
44 Restrict Workbench tests to the given file
45 services/arv-git-httpd_test="-check.vv"
46 Show all log messages, even when tests pass (also works
47 with services/keepstore_test etc.)
49 Print more debug messages
50 envvar=value Set \$envvar to value. Primarily useful for WORKSPACE,
51 *_test, and other examples shown above.
53 Assuming "--skip install" is not given, all components are installed
54 into \$GOPATH, \$VENDIR, and \$GEMHOME before running any tests. Many
55 test suites depend on other components being installed, and installing
56 everything tends to be quicker than debugging dependencies.
58 As a special concession to the current CI server config, CONFIGSRC
59 defaults to $HOME/arvados-api-server if that directory exists.
61 More information and background:
63 https://arvados.org/projects/arvados/wiki/Running_tests
68 apps/workbench_units (*)
69 apps/workbench_functionals (*)
70 apps/workbench_integration (*)
71 apps/workbench_benchmark
72 apps/workbench_profile
79 lib/controller/federation
80 lib/controller/railsproxy
89 lib/dispatchcloud/container
90 lib/dispatchcloud/scheduler
91 lib/dispatchcloud/ssh_executor
92 lib/dispatchcloud/worker
96 services/arv-git-httpd
98 services/dockercleaner
105 services/keep-balance
108 services/nodemanager_integration
109 services/crunch-dispatch-local
110 services/crunch-dispatch-slurm
134 tools/crunchstat-summary
135 tools/crunchstat-summary:py3
138 tools/keep-block-check
140 (*) apps/workbench is shorthand for apps/workbench_units +
141 apps/workbench_functionals + apps/workbench_integration
145 # First make sure to remove any ARVADOS_ variables from the calling
146 # environment that could interfere with the tests.
147 unset $(env | cut -d= -f1 | grep \^ARVADOS_)
149 # Reset other variables that could affect our [tests'] behavior by
159 export LANG=en_US.UTF-8
167 if [[ -z "$temp" ]]; then
168 # we didn't even get as far as making a temp dir
170 elif [[ -z "$temp_preserve" ]]; then
173 echo "Leaving behind temp dirs in $temp"
179 echo >&2 "Fatal: $* (encountered in ${FUNCNAME[1]} at ${BASH_SOURCE[1]} line ${BASH_LINENO[0]})"
185 if which create-plot-data-from-log.sh >/dev/null; then
186 create-plot-data-from-log.sh $BUILD_NUMBER "$WORKSPACE/apps/workbench/log/test.log" "$WORKSPACE/apps/workbench/log/"
188 rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
190 rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
197 [[ -n "${skip[sanity]}" ]] && return 0
198 ( [[ -n "$WORKSPACE" ]] && [[ -d "$WORKSPACE/services" ]] ) \
199 || fatal "WORKSPACE environment variable not set to a source directory (see: $0 --help)"
200 [[ -n "$CONFIGSRC" ]] \
201 || fatal "CONFIGSRC environment not set (see: $0 --help)"
202 [[ -s "$CONFIGSRC/config.yml" ]] \
203 || fatal "'$CONFIGSRC/config.yml' is empty or not found (see: $0 --help)"
204 echo Checking dependencies:
205 echo "locale: ${LANG}"
206 [[ "$(locale charmap)" = "UTF-8" ]] \
207 || fatal "Locale '${LANG}' is broken/missing. Try: echo ${LANG} | sudo tee -a /etc/locale.gen && sudo locale-gen"
208 echo -n 'virtualenv: '
209 virtualenv --version \
210 || fatal "No virtualenv. Try: apt-get install virtualenv (on ubuntu: python-virtualenv)"
213 || fatal "No ruby. Install >=2.1.9 (using rbenv, rvm, or source)"
216 || fatal "No go binary. See http://golang.org/doc/install"
217 [[ $(go version) =~ go1.([0-9]+) ]] && [[ ${BASH_REMATCH[1]} -ge 12 ]] \
218 || fatal "Go >= 1.12 required. See http://golang.org/doc/install"
220 gcc --version | egrep ^gcc \
221 || fatal "No gcc. Try: apt-get install build-essential"
223 find /usr/include -path '*fuse/fuse.h' | egrep --max-count=1 . \
224 || fatal "No fuse/fuse.h. Try: apt-get install libfuse-dev"
226 find /usr/include -path '*gnutls/gnutls.h' | egrep --max-count=1 . \
227 || fatal "No gnutls/gnutls.h. Try: apt-get install libgnutls28-dev"
228 echo -n 'Python2 pyconfig.h: '
229 find /usr/include -path '*/python2*/pyconfig.h' | egrep --max-count=1 . \
230 || fatal "No Python2 pyconfig.h. Try: apt-get install python2.7-dev"
231 echo -n 'Python3 pyconfig.h: '
232 find /usr/include -path '*/python3*/pyconfig.h' | egrep --max-count=1 . \
233 || fatal "No Python3 pyconfig.h. Try: apt-get install python3-dev"
235 || fatal "No netstat. Try: apt-get install net-tools"
237 PATH="$PATH:/sbin:/usr/sbin:/usr/local/sbin" nginx -v \
238 || fatal "No nginx. Try: apt-get install nginx"
240 perl -v | grep version \
241 || fatal "No perl. Try: apt-get install perl"
242 for mod in ExtUtils::MakeMaker JSON LWP Net::SSL; do
243 echo -n "perl $mod: "
244 perl -e "use $mod; print \"\$$mod::VERSION\\n\"" \
245 || fatal "No $mod. Try: apt-get install perl-modules libcrypt-ssleay-perl libjson-perl libwww-perl"
249 || fatal "No gitolite. Try: apt-get install gitolite3"
252 || fatal "No npm. Try: wget -O- https://nodejs.org/dist/v6.11.2/node-v6.11.2-linux-x64.tar.xz | sudo tar -C /usr/local -xJf - && sudo ln -s ../node-v6.11.2-linux-x64/bin/{node,npm} /usr/local/bin/"
254 cadaver --version | grep -w cadaver \
255 || fatal "No cadaver. Try: apt-get install cadaver"
256 echo -n 'libattr1 xattr.h: '
257 find /usr/include -path '*/attr/xattr.h' | egrep --max-count=1 . \
258 || fatal "No libattr1 xattr.h. Try: apt-get install libattr1-dev"
259 echo -n 'libcurl curl.h: '
260 find /usr/include -path '*/curl/curl.h' | egrep --max-count=1 . \
261 || fatal "No libcurl curl.h. Try: apt-get install libcurl4-gnutls-dev"
262 echo -n 'libpq libpq-fe.h: '
263 find /usr/include -path '*/postgresql/libpq-fe.h' | egrep --max-count=1 . \
264 || fatal "No libpq libpq-fe.h. Try: apt-get install libpq-dev"
265 echo -n 'libpam pam_appl.h: '
266 find /usr/include -path '*/security/pam_appl.h' | egrep --max-count=1 . \
267 || fatal "No libpam pam_appl.h. Try: apt-get install libpam-dev"
268 echo -n 'postgresql: '
269 psql --version || fatal "No postgresql. Try: apt-get install postgresql postgresql-client-common"
270 echo -n 'phantomjs: '
271 phantomjs --version || fatal "No phantomjs. Try: apt-get install phantomjs"
273 which Xvfb || fatal "No xvfb. Try: apt-get install xvfb"
275 dot -V || fatal "No graphviz. Try: apt-get install graphviz"
276 echo -n 'geckodriver: '
277 geckodriver --version | grep ^geckodriver || echo "No geckodriver. Try: wget -O- https://github.com/mozilla/geckodriver/releases/download/v0.23.0/geckodriver-v0.23.0-linux64.tar.gz | sudo tar -C /usr/local/bin -xzf - geckodriver"
279 if [[ "$NEED_SDK_R" = true ]]; then
282 which Rscript || fatal "No Rscript. Try: apt-get install r-base"
284 Rscript -e "library('testthat')" || fatal "No testthat. Try: apt-get install r-cran-testthat"
285 # needed for roxygen2, needed for devtools, needed for R sdk
286 pkg-config --exists libxml-2.0 || fatal "No libxml2. Try: apt-get install libxml2-dev"
287 # needed for pkgdown, builds R SDK doc pages
288 which pandoc || fatal "No pandoc. Try: apt-get install pandoc"
290 echo 'procs with /dev/fuse open:'
291 find /proc/*/fd -lname /dev/fuse 2>/dev/null | cut -d/ -f3 | xargs --no-run-if-empty ps -lywww
292 echo 'grep fuse /proc/self/mountinfo:'
293 grep fuse /proc/self/mountinfo
297 # i.e. rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
298 # $BUILD_NUMBER is set by Jenkins if this script is being called as part of a Jenkins run
299 if [[ -f "$1/$2" ]]; then
300 THEDATE=`date +%Y%m%d%H%M%S`
301 mv "$1/$2" "$1/$THEDATE-$BUILD_NUMBER-$2"
302 gzip "$1/$THEDATE-$BUILD_NUMBER-$2"
310 skip[apps/workbench_profile]=1
311 # nodemanager_integration tests are not reliable, see #12061.
312 skip[services/nodemanager_integration]=1
319 echo >&2 "$helpmessage"
327 only[$1]=1; skip[$1]=""; shift
339 only_install="$1"; shift
349 repeat=$((${1}+0)); shift
355 suite="${arg%%_test=*}"
357 testargs["$suite"]="$args"
360 eval export $(echo $arg | cut -d= -f1)=\"$(echo $arg | cut -d= -f2-)\"
363 echo >&2 "$0: Unrecognized option: '$arg'. Try: $0 --help"
369 # R SDK installation is very slow (~360s in a clean environment) and only
370 # required when testing it. Skip that step if it is not needed.
373 if [[ ${#only[@]} -ne 0 ]] &&
374 [[ -z "${only['sdk/R']}" && -z "${only['doc']}" ]]; then
378 if [[ ${skip["sdk/R"]} == 1 && ${skip["doc"]} == 1 ]]; then
382 if [[ $NEED_SDK_R == false ]]; then
383 echo "R SDK not needed, it will not be installed."
388 pid="$(cat "$WORKSPACE/tmp/${svc}.pid")"
389 if [[ -z "$pid" ]] || ! kill -0 "$pid"; then
390 tail $WORKSPACE/tmp/${1}*.log
391 echo "${svc} pid ${pid} not running"
394 echo "${svc} pid ${pid} ok"
399 base=$("${VENVDIR}/bin/python" -c "import yaml; print list(yaml.safe_load(file('$ARVADOS_CONFIG'))['Clusters']['zzzzz']['Services']['$1']['InternalURLs'].keys())[0]")
400 url="$base/_health/ping"
401 if ! curl -Ss -H "Authorization: Bearer e687950a23c3a9bceec28c6223a06c79" "${url}" | tee -a /dev/stderr | grep '"OK"'; then
407 checkdiscoverydoc() {
408 dd="https://${1}/discovery/v1/apis/arvados/v1/rest"
409 if ! (set -o pipefail; curl -fsk "$dd" | grep -q ^{ ); then
410 echo >&2 "ERROR: could not retrieve discovery doc from RailsAPI at $dd"
411 tail -v $WORKSPACE/tmp/railsapi.log
418 if [[ -n "$ARVADOS_TEST_API_HOST" ]]; then
421 . "$VENVDIR/bin/activate"
422 echo 'Starting API, controller, keepproxy, keep-web, arv-git-httpd, ws, and nginx ssl proxy...'
423 if [[ ! -d "$WORKSPACE/services/api/log" ]]; then
424 mkdir -p "$WORKSPACE/services/api/log"
426 # Remove empty api.pid file if it exists
427 if [[ -f "$WORKSPACE/tmp/api.pid" && ! -s "$WORKSPACE/tmp/api.pid" ]]; then
428 rm -f "$WORKSPACE/tmp/api.pid"
430 all_services_stopped=
434 && eval $(python sdk/python/tests/run_test_server.py start --auth admin) \
435 && export ARVADOS_TEST_API_HOST="$ARVADOS_API_HOST" \
436 && export ARVADOS_TEST_API_INSTALLED="$$" \
437 && checkpidfile api \
438 && checkdiscoverydoc $ARVADOS_API_HOST \
439 && eval $(python sdk/python/tests/run_test_server.py start_nginx) \
440 && checkpidfile nginx \
441 && python sdk/python/tests/run_test_server.py start_controller \
442 && checkpidfile controller \
443 && checkhealth Controller \
444 && checkdiscoverydoc $ARVADOS_API_HOST \
445 && python sdk/python/tests/run_test_server.py start_keep_proxy \
446 && checkpidfile keepproxy \
447 && python sdk/python/tests/run_test_server.py start_keep-web \
448 && checkpidfile keep-web \
449 && checkhealth WebDAV \
450 && python sdk/python/tests/run_test_server.py start_arv-git-httpd \
451 && checkpidfile arv-git-httpd \
452 && checkhealth GitHTTP \
453 && python sdk/python/tests/run_test_server.py start_ws \
455 && export ARVADOS_TEST_PROXY_SERVICES=1 \
456 && (env | egrep ^ARVADOS) \
459 if [[ $fail != 0 ]]; then
460 unset ARVADOS_TEST_API_HOST
466 if [[ -n "$all_services_stopped" ]]; then
469 unset ARVADOS_TEST_API_HOST ARVADOS_TEST_PROXY_SERVICES
470 . "$VENVDIR/bin/activate" || return
472 && python sdk/python/tests/run_test_server.py stop_nginx \
473 && python sdk/python/tests/run_test_server.py stop_arv-git-httpd \
474 && python sdk/python/tests/run_test_server.py stop_ws \
475 && python sdk/python/tests/run_test_server.py stop_keep-web \
476 && python sdk/python/tests/run_test_server.py stop_keep_proxy \
477 && python sdk/python/tests/run_test_server.py stop_controller \
478 && python sdk/python/tests/run_test_server.py stop \
479 && all_services_stopped=1
485 failures+=("($(basename $0) interrupted)")
490 setup_ruby_environment() {
491 if [[ -s "$HOME/.rvm/scripts/rvm" ]] ; then
492 source "$HOME/.rvm/scripts/rvm"
494 elif [[ -s "/usr/local/rvm/scripts/rvm" ]] ; then
495 source "/usr/local/rvm/scripts/rvm"
501 if [[ "$using_rvm" == true ]]; then
502 # If rvm is in use, we can't just put separate "dependencies"
503 # and "gems-under-test" paths to GEM_PATH: passenger resets
504 # the environment to the "current gemset", which would lose
505 # our GEM_PATH and prevent our test suites from running ruby
506 # programs (for example, the Workbench test suite could not
507 # boot an API server or run arv). Instead, we have to make an
508 # rvm gemset and use it for everything.
510 [[ `type rvm | head -n1` == "rvm is a function" ]] \
513 # Put rvm's favorite path back in first place (overriding
514 # virtualenv, which just put itself there). Ignore rvm's
515 # complaint about not being in first place already.
516 rvm use @default 2>/dev/null
518 # Create (if needed) and switch to an @arvados-tests-* gemset,
519 # salting the gemset name so it doesn't interfere with
520 # concurrent builds in other workspaces. Leave the choice of
521 # ruby to the caller.
522 gemset="arvados-tests-$(echo -n "${WORKSPACE}" | md5sum | head -c16)"
523 rvm use "@${gemset}" --create \
524 || fatal 'rvm gemset setup'
527 (bundle version | grep -q 2.0.2) || gem install bundler -v 2.0.2
528 bundle="$(which bundle)"
530 "$bundle" version | grep 2.0.2 || fatal 'install bundler'
532 # When our "bundle install"s need to install new gems to
533 # satisfy dependencies, we want them to go where "gem install
534 # --user-install" would put them. (However, if the caller has
535 # already set GEM_HOME, we assume that's where dependencies
536 # should be installed, and we should leave it alone.)
538 if [ -z "$GEM_HOME" ]; then
539 user_gempath="$(gem env gempath)"
540 export GEM_HOME="${user_gempath%%:*}"
542 PATH="$(gem env gemdir)/bin:$PATH"
544 # When we build and install our own gems, we install them in our
545 # $GEMHOME tmpdir, and we want them to be at the front of GEM_PATH and
546 # PATH so integration tests prefer them over other versions that
547 # happen to be installed in $user_gempath, system dirs, etc.
549 tmpdir_gem_home="$(env - PATH="$PATH" HOME="$GEMHOME" gem env gempath | cut -f1 -d:)"
550 PATH="$tmpdir_gem_home/bin:$PATH"
551 export GEM_PATH="$tmpdir_gem_home"
553 echo "Will install dependencies to $(gem env gemdir)"
554 echo "Will install arvados gems to $tmpdir_gem_home"
555 echo "Gem search path is GEM_PATH=$GEM_PATH"
556 bundle="$(gem env gempath | cut -f1 -d:)/bin/bundle"
559 ("$bundle" version | grep -q 2.0.2) \
560 || gem install --user bundler -v 2.0.2
561 "$bundle" version | tee /dev/stderr | grep -q 'version 2'
562 ) || fatal 'install bundler'
567 if [[ "$using_rvm" == true ]]; then
570 GEM_HOME="$tmpdir_gem_home" GEM_PATH="$tmpdir_gem_home" "$@"
574 gem_uninstall_if_exists() {
575 if gem list "$1\$" | egrep '^\w'; then
576 gem uninstall --force --all --executables "$1"
581 local venvdest="$1"; shift
582 if ! [[ -e "$venvdest/bin/activate" ]] || ! [[ -e "$venvdest/bin/pip" ]]; then
583 virtualenv --setuptools "$@" "$venvdest" || fatal "virtualenv $venvdest failed"
584 elif [[ -n "$short" ]]; then
587 if [[ $("$venvdest/bin/python" --version 2>&1) =~ \ 3\.[012]\. ]]; then
588 # pip 8.0.0 dropped support for python 3.2, e.g., debian wheezy
589 "$venvdest/bin/pip" install --no-cache-dir 'setuptools>=18.5' 'pip>=7,<8'
591 "$venvdest/bin/pip" install --no-cache-dir 'setuptools>=18.5' 'pip>=7'
598 echo "WORKSPACE=$WORKSPACE"
600 # Clean up .pyc files that may exist in the workspace
602 find -name '*.pyc' -delete
604 if [[ -z "$temp" ]]; then
608 # Set up temporary install dirs (unless existing dirs were supplied)
609 for tmpdir in VENVDIR VENV3DIR GOPATH GEMHOME PERLINSTALLBASE R_LIBS
611 if [[ -z "${!tmpdir}" ]]; then
612 eval "$tmpdir"="$temp/$tmpdir"
614 if ! [[ -d "${!tmpdir}" ]]; then
615 mkdir "${!tmpdir}" || fatal "can't create ${!tmpdir} (does $temp exist?)"
619 rm -vf "${WORKSPACE}/tmp/*.log"
621 export PERLINSTALLBASE
622 export PERL5LIB="$PERLINSTALLBASE/lib/perl5${PERL5LIB:+:$PERL5LIB}"
627 # Make sure our compiled binaries under test override anything
628 # else that might be in the environment.
629 export PATH=$GOPATH/bin:$PATH
631 # Jenkins config requires that glob tmp/*.log match something. Ensure
632 # that happens even if we don't end up running services that set up
634 mkdir -p "${WORKSPACE}/tmp/" || fatal "could not mkdir ${WORKSPACE}/tmp"
635 touch "${WORKSPACE}/tmp/controller.log" || fatal "could not touch ${WORKSPACE}/tmp/controller.log"
637 unset http_proxy https_proxy no_proxy
639 # Note: this must be the last time we change PATH, otherwise rvm will
641 setup_ruby_environment
647 go mod download || fatal "Go deps failed"
648 which goimports >/dev/null || go get golang.org/x/tools/cmd/goimports || fatal "Go setup failed"
650 setup_virtualenv "$VENVDIR" --python python2.7
651 . "$VENVDIR/bin/activate"
653 # Needed for run_test_server.py which is used by certain (non-Python) tests.
656 "${VENVDIR}/bin/pip" install PyYAML
657 "${VENV3DIR}/bin/pip" install PyYAML
658 cd "$WORKSPACE/sdk/python"
659 python setup.py install
660 ) || fatal "installing PyYAML and sdk/python failed"
662 # Preinstall libcloud if using a fork; otherwise nodemanager "pip
663 # install" won't pick it up by default.
664 if [[ -n "$LIBCLOUD_PIN_SRC" ]]; then
665 pip freeze 2>/dev/null | egrep ^apache-libcloud==$LIBCLOUD_PIN \
666 || pip install --pre --ignore-installed --no-cache-dir "$LIBCLOUD_PIN_SRC" >/dev/null \
667 || fatal "pip install apache-libcloud failed"
670 # Deactivate Python 2 virtualenv
673 # If Python 3 is available, set up its virtualenv in $VENV3DIR.
674 # Otherwise, skip dependent tests.
675 PYTHON3=$(which python3)
676 if [[ ${?} = 0 ]]; then
677 setup_virtualenv "$VENV3DIR" --python python3
682 Warning: python3 could not be found. Python 3 tests will be skipped.
693 if [[ "$remain" -gt 1 ]]; then
694 remain=$((${remain}-1))
695 title "(repeating ${remain} more times)"
699 elif [[ "$retry" == 1 ]]; then
700 read -p 'Try again? [Y/n] ' x
701 if [[ "$x" != "y" ]] && [[ "$x" != "" ]]
713 apps/workbench_units | apps/workbench_functionals | apps/workbench_integration)
716 services/nodemanager | services/nodemanager_integration)
717 suite=services/nodemanager_suite
723 if [[ -n "${skip[$suite]}" || \
724 -n "${skip[$1]}" || \
725 (${#only[@]} -ne 0 && ${only[$suite]} -eq 0 && ${only[$1]} -eq 0) ]]; then
731 check_arvados_config "$1"
733 gofmt | doc | lib/cli | lib/cloud/azure | lib/cloud/ec2 | lib/cloud/cloudtest | lib/cmd | lib/dispatchcloud/ssh_executor | lib/dispatchcloud/worker)
734 check_arvados_config "$1"
735 # don't care whether services are running
738 check_arvados_config "$1"
739 if ! start_services; then
740 checkexit 1 "$1 tests"
741 title "test $1 -- failed to start services"
746 retry do_test_once ${@}
750 version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}
751 echo "-X git.arvados.org/arvados.git/lib/cmd.version=${version} -X main.version=${version}"
761 if which deactivate >/dev/null; then deactivate; fi
762 if ! . "$VENVDIR/bin/activate"
765 elif [[ "$2" == "go" ]]
767 covername="coverage-$(echo "$1" | sed -e 's/\//_/g')"
768 coverflags=("-covermode=count" "-coverprofile=$WORKSPACE/tmp/.$covername.tmp")
769 # We do "go install" here to catch compilation errors
770 # before trying "go test". Otherwise, coverage-reporting
771 # mode makes Go show the wrong line numbers when reporting
772 # compilation errors.
773 go install -ldflags "$(go_ldflags)" "$WORKSPACE/$1" && \
774 cd "$WORKSPACE/$1" && \
775 if [[ -n "${testargs[$1]}" ]]
777 # "go test -check.vv giturl" doesn't work, but this
779 go test ${short:+-short} ${testargs[$1]}
781 # The above form gets verbose even when testargs is
782 # empty, so use this form in such cases:
783 go test ${short:+-short} ${coverflags[@]} "git.arvados.org/arvados.git/$1"
786 if [[ -f "$WORKSPACE/tmp/.$covername.tmp" ]]
788 go tool cover -html="$WORKSPACE/tmp/.$covername.tmp" -o "$WORKSPACE/tmp/$covername.html"
789 rm "$WORKSPACE/tmp/.$covername.tmp"
791 [[ $result = 0 ]] && gofmt -e -d *.go
792 elif [[ "$2" == "pip" ]]
795 cd "$WORKSPACE/$1" && while :
797 tries=$((${tries}+1))
798 # $3 can name a path directory for us to use, including trailing
799 # slash; e.g., the bin/ subdirectory of a virtualenv.
800 if [[ -e "${3}activate" ]]; then
803 python setup.py ${short:+--short-tests-only} test ${testargs[$1]}
805 if [[ ${tries} < 3 && ${result} == 137 ]]
807 printf '\n*****\n%s tests killed -- retrying\n*****\n\n' "$1"
813 elif [[ "$2" != "" ]]
820 checkexit $result "$1 tests"
821 title "test $1 -- `timer`"
825 check_arvados_config() {
826 if [[ "$1" = "env" ]] ; then
829 if [[ -z "$ARVADOS_CONFIG" ]] ; then
830 # Create config file. The run_test_server script requires PyYAML,
831 # so virtualenv needs to be active. Downstream steps like
832 # workbench install which require a valid config.yml.
833 if [[ ! -s "$VENVDIR/bin/activate" ]] ; then
836 . "$VENVDIR/bin/activate"
838 eval $(python sdk/python/tests/run_test_server.py setup_config)
844 if [[ -n "${skip[install]}" || ( -n "${only_install}" && "${only_install}" != "${1}" && "${only_install}" != "${2}" ) ]]; then
847 check_arvados_config "$1"
848 retry do_install_once ${@}
856 if which deactivate >/dev/null; then deactivate; fi
857 if [[ "$1" != "env" ]] && ! . "$VENVDIR/bin/activate"; then
859 elif [[ "$2" == "go" ]]
861 go install -ldflags "$(go_ldflags)" "$WORKSPACE/$1"
862 elif [[ "$2" == "pip" ]]
864 # $3 can name a path directory for us to use, including trailing
865 # slash; e.g., the bin/ subdirectory of a virtualenv.
867 # Need to change to a different directory after creating
868 # the source dist package to avoid a pip bug.
869 # see https://arvados.org/issues/5766 for details.
871 # Also need to install twice, because if it believes the package is
872 # already installed, pip it won't install it. So the first "pip
873 # install" ensures that the dependencies are met, the second "pip
874 # install" ensures that we've actually installed the local package
877 && "${3}python" setup.py sdist rotate --keep=1 --match .tar.gz \
879 && "${3}pip" install --no-cache-dir "$WORKSPACE/$1/dist"/*.tar.gz \
880 && "${3}pip" install --no-cache-dir --no-deps --ignore-installed "$WORKSPACE/$1/dist"/*.tar.gz
881 elif [[ "$2" != "" ]]
888 checkexit $result "$1 install"
889 title "install $1 -- `timer`"
893 bundle_install_trylocal() {
896 echo "(Running bundle install --local. 'could not find package' messages are OK.)"
897 if ! "$bundle" install --local --no-deployment; then
898 echo "(Running bundle install again, without --local.)"
899 "$bundle" install --no-deployment
906 cd "$WORKSPACE/doc" \
907 && bundle_install_trylocal \
914 with_test_gemset gem_uninstall_if_exists "$gemname" \
915 && cd "$WORKSPACE/$srcpath" \
916 && bundle_install_trylocal \
917 && gem build "$gemname.gemspec" \
918 && with_test_gemset gem install --no-document $(ls -t "$gemname"-*.gem|head -n1)
922 install_gem arvados sdk/ruby
926 if [[ "$NEED_SDK_R" = true ]]; then
927 cd "$WORKSPACE/sdk/R" \
928 && Rscript --vanilla install_deps.R
933 cd "$WORKSPACE/sdk/perl" \
934 && perl Makefile.PL INSTALL_BASE="$PERLINSTALLBASE" \
935 && make install INSTALLDIRS=perl
939 install_gem arvados-cli sdk/cli
942 install_services/login-sync() {
943 install_gem arvados-login-sync services/login-sync
946 install_services/api() {
948 check_arvados_config "services/api"
949 cd "$WORKSPACE/services/api" \
950 && RAILS_ENV=test bundle_install_trylocal \
953 rm -f config/environments/test.rb
954 cp config/environments/test.rb.example config/environments/test.rb
956 # Clear out any lingering postgresql connections to the test
957 # database, so that we can drop it. This assumes the current user
958 # is a postgresql superuser.
959 cd "$WORKSPACE/services/api" \
960 && test_database=$("${VENVDIR}/bin/python" -c "import yaml; print yaml.safe_load(file('$ARVADOS_CONFIG'))['Clusters']['zzzzz']['PostgreSQL']['Connection']['dbname']") \
961 && psql "$test_database" -c "SELECT pg_terminate_backend (pg_stat_activity.pid::int) FROM pg_stat_activity WHERE pg_stat_activity.datname = '$test_database';" 2>/dev/null
963 mkdir -p "$WORKSPACE/services/api/tmp/pids"
965 cert="$WORKSPACE/services/api/tmp/self-signed"
966 if [[ ! -e "$cert.pem" || "$(date -r "$cert.pem" +%s)" -lt 1512659226 ]]; then
968 dir="$WORKSPACE/services/api/tmp"
970 openssl req -newkey rsa:2048 -nodes -subj '/C=US/ST=State/L=City/CN=localhost' -out "$cert.csr" -keyout "$cert.key" </dev/null
971 openssl x509 -req -in "$cert.csr" -signkey "$cert.key" -out "$cert.pem" -days 3650 -extfile <(printf 'subjectAltName=DNS:localhost,DNS:::1,DNS:0.0.0.0,DNS:127.0.0.1,IP:::1,IP:0.0.0.0,IP:127.0.0.1')
975 cd "$WORKSPACE/services/api" \
977 && mkdir -p tmp/git \
979 && tar xf ../../test/test.git.tar \
980 && mkdir -p internal.git \
981 && git --git-dir internal.git init \
986 cd "$WORKSPACE/services/api"
987 export RAILS_ENV=test
988 if "$bundle" exec rails db:environment:set ; then
989 "$bundle" exec rake db:drop
991 "$bundle" exec rake db:setup
992 "$bundle" exec rake db:fixtures:load
996 declare -a pythonstuff
1003 services/dockercleaner:py3
1006 services/nodemanager
1007 tools/crunchstat-summary
1008 tools/crunchstat-summary:py3
1012 gostuff=($(cd "$WORKSPACE" && git grep -lw func | grep \\.go | sed -e 's/\/[^\/]*$//' | sort -u))
1014 install_apps/workbench() {
1015 cd "$WORKSPACE/apps/workbench" \
1016 && mkdir -p tmp/cache \
1017 && RAILS_ENV=test bundle_install_trylocal \
1018 && RAILS_ENV=test RAILS_GROUPS=assets "$bundle" exec rake npm:install
1025 ARVADOS_API_HOST=qr1hi.arvadosapi.com
1026 # Make sure python-epydoc is installed or the next line won't
1028 PYTHONPATH=$WORKSPACE/sdk/python/ "$bundle" exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
1033 cd "$WORKSPACE" || return 1
1034 dirs=$(ls -d */ | egrep -v 'vendor|tmp')
1035 [[ -z "$(gofmt -e -d $dirs | tee -a /dev/stderr)" ]]
1038 test_services/api() {
1039 rm -f "$WORKSPACE/services/api/git-commit.version"
1040 cd "$WORKSPACE/services/api" \
1041 && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake test TESTOPTS=\'-v -d\' ${testargs[services/api]}
1045 cd "$WORKSPACE/sdk/ruby" \
1046 && "$bundle" exec rake test TESTOPTS=-v ${testargs[sdk/ruby]}
1050 if [[ "$NEED_SDK_R" = true ]]; then
1051 cd "$WORKSPACE/sdk/R" \
1052 && Rscript --vanilla run_test.R
1057 cd "$WORKSPACE/sdk/cli" \
1058 && mkdir -p /tmp/keep \
1059 && KEEP_LOCAL_STORE=/tmp/keep "$bundle" exec rake test TESTOPTS=-v ${testargs[sdk/cli]}
1062 test_sdk/java-v2() {
1063 cd "$WORKSPACE/sdk/java-v2" && gradle test
1066 test_services/login-sync() {
1067 cd "$WORKSPACE/services/login-sync" \
1068 && "$bundle" exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
1071 test_services/nodemanager_integration() {
1072 cd "$WORKSPACE/services/nodemanager" \
1073 && tests/integration_test.py ${testargs[services/nodemanager_integration]}
1076 test_apps/workbench_units() {
1077 local TASK="test:units"
1078 cd "$WORKSPACE/apps/workbench" \
1079 && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_units]}
1082 test_apps/workbench_functionals() {
1083 local TASK="test:functionals"
1084 cd "$WORKSPACE/apps/workbench" \
1085 && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_functionals]}
1088 test_apps/workbench_integration() {
1089 local TASK="test:integration"
1090 cd "$WORKSPACE/apps/workbench" \
1091 && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_integration]}
1094 test_apps/workbench_benchmark() {
1095 local TASK="test:benchmark"
1096 cd "$WORKSPACE/apps/workbench" \
1097 && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_benchmark]}
1100 test_apps/workbench_profile() {
1101 local TASK="test:profile"
1102 cd "$WORKSPACE/apps/workbench" \
1103 && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_profile]}
1107 # Install parts needed by test suites
1109 do_install cmd/arvados-server go
1112 do_install sdk/python pip
1113 do_install sdk/python pip "${VENV3DIR}/bin/"
1115 do_install services/api
1116 do_install services/arv-git-httpd go
1117 do_install services/keepproxy go
1118 do_install services/keepstore go
1119 do_install services/keep-web go
1120 do_install services/ws go
1130 do_install services/login-sync
1131 for p in "${pythonstuff[@]}"
1134 if [[ ${dir} = ${p} ]]; then
1135 if [[ -z ${skip[python2]} ]]; then
1136 do_install ${dir} pip
1138 elif [[ -n ${PYTHON3} ]]; then
1139 if [[ -z ${skip[python3]} ]]; then
1140 do_install ${dir} pip "$VENV3DIR/bin/"
1144 for g in "${gostuff[@]}"
1148 do_install services/api
1149 do_install apps/workbench
1154 do_test services/api
1156 # Shortcut for when we're only running apiserver tests. This saves a bit of time,
1157 # because we don't need to start up the api server for subsequent tests.
1158 if [ ! -z "$only" ] && [ "$only" == "services/api" ]; then
1159 rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
1168 do_test services/login-sync
1170 do_test services/nodemanager_integration
1171 for p in "${pythonstuff[@]}"
1174 if [[ ${dir} = ${p} ]]; then
1175 if [[ -z ${skip[python2]} ]]; then
1178 elif [[ -n ${PYTHON3} ]]; then
1179 if [[ -z ${skip[python3]} ]]; then
1180 do_test ${dir} pip "$VENV3DIR/bin/"
1185 for g in "${gostuff[@]}"
1189 do_test apps/workbench_units
1190 do_test apps/workbench_functionals
1191 do_test apps/workbench_integration
1192 do_test apps/workbench_benchmark
1193 do_test apps/workbench_profile
1196 help_interactive() {
1197 echo "== Interactive commands:"
1198 echo "TARGET (short for 'test DIR')"
1200 echo "test TARGET:py3 (test with python3)"
1201 echo "test TARGET -check.vv (pass arguments to test)"
1202 echo "install TARGET"
1203 echo "install env (go/python libs)"
1204 echo "install deps (go/python libs + arvados components needed for integration tests)"
1205 echo "reset (...services used by integration tests)"
1207 echo "== Test targets:"
1208 echo "${!testfuncargs[@]}" | tr ' ' '\n' | sort | column
1213 declare -A testfuncargs=()
1214 for g in "${gostuff[@]}"; do
1215 testfuncargs[$g]="$g go"
1217 for p in "${pythonstuff[@]}"; do
1219 testfuncargs[$dir]="$dir pip $VENVDIR/bin/"
1220 testfuncargs[$dir:py3]="$dir pip $VENV3DIR/bin/"
1223 testfuncargs["sdk/cli"]="sdk/cli"
1224 testfuncargs["sdk/R"]="sdk/R"
1225 testfuncargs["sdk/java-v2"]="sdk/java-v2"
1226 testfuncargs["apps/workbench_units"]="apps/workbench_units"
1227 testfuncargs["apps/workbench_functionals"]="apps/workbench_functionals"
1228 testfuncargs["apps/workbench_integration"]="apps/workbench_integration"
1229 testfuncargs["apps/workbench_benchmark"]="apps/workbench_benchmark"
1230 testfuncargs["apps/workbench_profile"]="apps/workbench_profile"
1232 if [[ -z ${interactive} ]]; then
1239 if [[ -e "$VENVDIR/bin/activate" ]]; then stop_services; fi
1241 if [[ "$TERM" = dumb ]]; then
1242 # assume emacs, or something, is offering a history buffer
1243 # and pre-populating the command will only cause trouble
1245 elif [[ ! -e "$VENVDIR/bin/activate" ]]; then
1246 nextcmd="install deps"
1253 nextcmd="install deps"
1255 HISTFILE="$WORKSPACE/tmp/.history"
1257 while read -p 'What next? ' -e -i "$nextcmd" nextcmd; do
1258 history -s "$nextcmd"
1260 read verb target opts <<<"${nextcmd}"
1261 target="${target%/}"
1262 target="${target/\/:/:}"
1279 testargs["$target"]="${opts}"
1280 tt="${testfuncargs[${target}]}"
1290 if [[ ${#successes[@]} -gt 0 || ${#failures[@]} -gt 0 ]]; then