build/run-library.sh

   1 #!/bin/bash -xe
   2 # Copyright (C) The Arvados Authors. All rights reserved.
   3 #
   4 # SPDX-License-Identifier: AGPL-3.0
   5
   6 # A library of functions shared by the various scripts in this directory.
   7
   8 # This is the timestamp about when we merged changed to include licenses
   9 # with Arvados packages.  We use it as a heuristic to add revisions for
  10 # older packages.
  11 LICENSE_PACKAGE_TS=20151208015500
  12
  13 if [[ -z "$ARVADOS_BUILDING_VERSION" ]]; then
  14     RAILS_PACKAGE_ITERATION=1
  15 else
  16     RAILS_PACKAGE_ITERATION="$ARVADOS_BUILDING_ITERATION"
  17 fi
  18
  19 debug_echo () {
  20     echo "$@" >"$STDOUT_IF_DEBUG"
  21 }
  22
  23 find_python_program() {
  24     prog="$1"
  25     shift
  26     for prog in "$@"; do
  27         if "$prog" --version >/dev/null 2>&1; then
  28             echo "$prog"
  29             return 0
  30         fi
  31     done
  32     cat >&2 <<EOF
  33 $helpmessage
  34
  35 Error: $prog (from Python setuptools module) not found
  36
  37 EOF
  38     exit 1
  39 }
  40
  41 format_last_commit_here() {
  42     local format="$1"; shift
  43     local dir="${1:-.}"; shift
  44     TZ=UTC git log -n1 --first-parent "--format=format:$format" "$dir"
  45 }
  46
  47 version_from_git() {
  48     # Output the version being built, or if we're building a
  49     # dev/prerelease, output a version number based on the git log for
  50     # the given $subdir.
  51     local subdir="$1"; shift
  52     if [[ -n "$ARVADOS_BUILDING_VERSION" ]]; then
  53         echo "$ARVADOS_BUILDING_VERSION"
  54         return
  55     fi
  56
  57     local git_ts git_hash
  58     declare $(format_last_commit_here "git_ts=%ct git_hash=%h" "$subdir")
  59     ARVADOS_BUILDING_VERSION="$($WORKSPACE/build/version-at-commit.sh $git_hash)"
  60     echo "$ARVADOS_BUILDING_VERSION"
  61 }
  62
  63 nohash_version_from_git() {
  64     local subdir="$1"; shift
  65     if [[ -n "$ARVADOS_BUILDING_VERSION" ]]; then
  66         echo "$ARVADOS_BUILDING_VERSION"
  67         return
  68     fi
  69     version_from_git $subdir | cut -d. -f1-4
  70 }
  71
  72 timestamp_from_git() {
  73     local subdir="$1"; shift
  74     format_last_commit_here "%ct" "$subdir"
  75 }
  76
  77 calculate_python_sdk_cwl_package_versions() {
  78   python_sdk_version=$(cd sdk/python && python3 arvados_version.py)
  79   cwl_runner_version=$(cd sdk/cwl && python3 arvados_version.py)
  80 }
  81
  82 # Usage: get_native_arch
  83 get_native_arch() {
  84   # Only amd64 and aarch64 are supported at the moment
  85   local native_arch=""
  86   case "$HOSTTYPE" in
  87     x86_64)
  88       native_arch="amd64"
  89       ;;
  90     aarch64)
  91       native_arch="arm64"
  92       ;;
  93     *)
  94       echo "Error: architecture not supported"
  95       exit 1
  96       ;;
  97   esac
  98   echo $native_arch
  99 }
 100
 101 handle_ruby_gem() {
 102     local gem_name="$1"; shift
 103     local gem_version="$(nohash_version_from_git)"
 104     local gem_src_dir="$(pwd)"
 105
 106     if [[ -n "$ONLY_BUILD" ]] && [[ "$gem_name" != "$ONLY_BUILD" ]] ; then
 107         return 0
 108     fi
 109
 110     if ! [[ -e "${gem_name}-${gem_version}.gem" ]]; then
 111         find -maxdepth 1 -name "${gem_name}-*.gem" -delete
 112
 113         # -q appears to be broken in gem version 2.2.2
 114         $GEM build "$gem_name.gemspec" $DASHQ_UNLESS_DEBUG >"$STDOUT_IF_DEBUG" 2>"$STDERR_IF_DEBUG"
 115     fi
 116 }
 117
 118 calculate_go_package_version() {
 119   # $__returnvar has the nameref attribute set, which means it is a reference
 120   # to another variable that is passed in as the first argument to this function.
 121   # see https://www.gnu.org/software/bash/manual/html_node/Shell-Parameters.html
 122   local -n __returnvar="$1"; shift
 123   local oldpwd="$PWD"
 124
 125   cd "$WORKSPACE"
 126   go mod download
 127
 128   # Update the version number and build a new package if the vendor
 129   # bundle has changed, or the command imports anything from the
 130   # Arvados SDK and the SDK has changed.
 131   declare -a checkdirs=(go.mod go.sum)
 132   while [ -n "$1" ]; do
 133       checkdirs+=("$1")
 134       shift
 135   done
 136   # Even our rails packages (version calculation happens here!) depend on a go component (arvados-server)
 137   # Everything depends on the build directory.
 138   checkdirs+=(sdk/go lib build)
 139   local timestamp=0
 140   for dir in ${checkdirs[@]}; do
 141       cd "$WORKSPACE"
 142       ts="$(timestamp_from_git "$dir")"
 143       if [[ "$ts" -gt "$timestamp" ]]; then
 144           version=$(version_from_git "$dir")
 145           timestamp="$ts"
 146       fi
 147   done
 148   cd "$oldpwd"
 149   __returnvar="$version"
 150 }
 151
 152 # Usage: package_go_binary services/foo arvados-foo [deb|rpm] [amd64|arm64] "Compute foo to arbitrary precision" [apache-2.0.txt]
 153 package_go_binary() {
 154   local src_path="$1"; shift
 155   local prog="$1"; shift
 156   local package_format="$1"; shift
 157   local target_arch="$1"; shift
 158   local description="$1"; shift
 159   local license_file="${1:-agpl-3.0.txt}"; shift
 160
 161   if [[ -n "$ONLY_BUILD" ]] && [[ "$prog" != "$ONLY_BUILD" ]]; then
 162     # arvados-workbench depends on arvados-server at build time, so even when
 163     # only arvados-workbench is being built, we need to build arvados-server too
 164     if [[ "$prog" != "arvados-server" ]] || [[ "$ONLY_BUILD" != "arvados-workbench" ]]; then
 165       debug_echo -e "Skipping build of $prog package."
 166       return 0
 167     fi
 168   fi
 169
 170   native_arch=$(get_native_arch)
 171
 172   if [[ "$native_arch" != "amd64" ]] && [[ -n "$target_arch" ]] && [[ "$native_arch" != "$target_arch" ]]; then
 173     echo "Error: no cross compilation support for Go on $native_arch, can not build $prog for $target_arch"
 174     return 1
 175   fi
 176
 177   cross_compilation=1
 178   if [[ "$TARGET" == "centos7" ]]; then
 179     if [[ "$native_arch" == "amd64" ]] && [[ -n "$target_arch" ]] && [[ "$native_arch" != "$target_arch" ]]; then
 180       echo "Error: no cross compilation support for Go on $native_arch for $TARGET, can not build $prog for $target_arch"
 181       return 1
 182     fi
 183     cross_compilation=0
 184   fi
 185
 186   if [[ "$package_format" == "deb" ]] &&
 187      [[ "$TARGET" == "debian10" ]] || [[ "$TARGET" == "ubuntu1804" ]] || [[ "$TARGET" == "ubuntu2004" ]]; then
 188     # Due to bug https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=983477 the libfuse-dev package for arm64 does
 189     # not install properly side by side with the amd64 version before Debian 11.
 190     if [[ "$native_arch" == "amd64" ]] && [[ -n "$target_arch" ]] && [[ "$native_arch" != "$target_arch" ]]; then
 191       echo "Error: no cross compilation support for Go on $native_arch for $TARGET, can not build $prog for $target_arch"
 192       return 1
 193     fi
 194     cross_compilation=0
 195   fi
 196
 197   if [[ -n "$target_arch" ]]; then
 198     archs=($target_arch)
 199   else
 200     # No target architecture specified, default to native target. When on amd64
 201     # also crosscompile arm64 (when supported).
 202     archs=($native_arch)
 203     if [[ $cross_compilation -ne 0 ]]; then
 204       archs+=("arm64")
 205     fi
 206   fi
 207
 208   for ta in ${archs[@]}; do
 209     package_go_binary_worker "$src_path" "$prog" "$package_format" "$description" "$native_arch" "$ta" "$license_file"
 210     retval=$?
 211     if [[ $retval -ne 0 ]]; then
 212       return $retval
 213     fi
 214   done
 215 }
 216
 217 # Usage: package_go_binary services/foo arvados-foo deb "Compute foo to arbitrary precision" [amd64/arm64] [amd64/arm64] [apache-2.0.txt]
 218 package_go_binary_worker() {
 219     local src_path="$1"; shift
 220     local prog="$1"; shift
 221     local package_format="$1"; shift
 222     local description="$1"; shift
 223     local native_arch="${1:-amd64}"; shift
 224     local target_arch="${1:-amd64}"; shift
 225     local license_file="${1:-agpl-3.0.txt}"; shift
 226
 227     debug_echo "package_go_binary $src_path as $prog (native arch: $native_arch, target arch: $target_arch)"
 228     local basename="${src_path##*/}"
 229     calculate_go_package_version go_package_version $src_path
 230
 231     cd $WORKSPACE/packages/$TARGET
 232     test_package_presence "$prog" "$go_package_version" "go" "" "$target_arch"
 233     if [[ $? -ne 0 ]]; then
 234       return 0
 235     fi
 236
 237     echo "Building $package_format ($target_arch) package for $prog from $src_path"
 238     if [[ "$native_arch" == "amd64" ]] && [[ "$target_arch" == "arm64" ]]; then
 239       CGO_ENABLED=1 CC=aarch64-linux-gnu-gcc GOARCH=${target_arch} go install -ldflags "-X git.arvados.org/arvados.git/lib/cmd.version=${go_package_version} -X main.version=${go_package_version}" "git.arvados.org/arvados.git/$src_path"
 240     else
 241       GOARCH=${arch} go install -ldflags "-X git.arvados.org/arvados.git/lib/cmd.version=${go_package_version} -X main.version=${go_package_version}" "git.arvados.org/arvados.git/$src_path"
 242     fi
 243
 244     local -a switches=()
 245
 246     binpath=$GOPATH/bin/${basename}
 247     if [[ "${target_arch}" != "${native_arch}" ]]; then
 248       switches+=("-a${target_arch}")
 249       binpath="$GOPATH/bin/linux_${target_arch}/${basename}"
 250     fi
 251
 252     systemd_unit="$WORKSPACE/${src_path}/${prog}.service"
 253     if [[ -e "${systemd_unit}" ]]; then
 254         switches+=(
 255             --after-install "${WORKSPACE}/build/go-python-package-scripts/postinst"
 256             --before-remove "${WORKSPACE}/build/go-python-package-scripts/prerm"
 257             "${systemd_unit}=/lib/systemd/system/${prog}.service")
 258     fi
 259     switches+=("$WORKSPACE/${license_file}=/usr/share/doc/$prog/${license_file}")
 260
 261     fpm_build "${WORKSPACE}/${src_path}" "$binpath=/usr/bin/${prog}" "${prog}" dir "${go_package_version}" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=${description}" "${switches[@]}"
 262 }
 263
 264 # Usage: package_go_so lib/foo arvados_foo.so arvados-foo deb amd64 "Arvados foo library"
 265 package_go_so() {
 266     local src_path="$1"; shift
 267     local sofile="$1"; shift
 268     local pkg="$1"; shift
 269     local package_format="$1"; shift
 270     local target_arch="$1"; shift # supported: amd64, arm64
 271     local description="$1"; shift
 272
 273     if [[ -n "$ONLY_BUILD" ]] && [[ "$pkg" != "$ONLY_BUILD" ]]; then
 274       debug_echo -e "Skipping build of $pkg package."
 275       return 0
 276     fi
 277
 278     debug_echo "package_go_so $src_path as $pkg"
 279
 280     calculate_go_package_version go_package_version $src_path
 281     cd $WORKSPACE/packages/$TARGET
 282     test_package_presence $pkg $go_package_version go || return 1
 283     cd $WORKSPACE/$src_path
 284     go build -buildmode=c-shared -o ${GOPATH}/bin/${sofile}
 285     cd $WORKSPACE/packages/$TARGET
 286     local -a fpmargs=(
 287         "--url=https://arvados.org"
 288         "--license=Apache License, Version 2.0"
 289         "--description=${description}"
 290         "$WORKSPACE/apache-2.0.txt=/usr/share/doc/$pkg/apache-2.0.txt"
 291     )
 292     if [[ -e "$WORKSPACE/$src_path/pam-configs-arvados" ]]; then
 293         fpmargs+=("$WORKSPACE/$src_path/pam-configs-arvados=/usr/share/doc/$pkg/pam-configs-arvados-go")
 294     fi
 295     if [[ -e "$WORKSPACE/$src_path/README" ]]; then
 296         fpmargs+=("$WORKSPACE/$src_path/README=/usr/share/doc/$pkg/README")
 297     fi
 298     fpm_build "${WORKSPACE}/${src_path}" "$GOPATH/bin/${sofile}=/usr/lib/${sofile}" "${pkg}" dir "${go_package_version}" "${fpmargs[@]}"
 299 }
 300
 301 default_iteration() {
 302     if [[ -n "$ARVADOS_BUILDING_VERSION" ]]; then
 303         echo "$ARVADOS_BUILDING_ITERATION"
 304         return
 305     fi
 306     local package_name="$1"; shift
 307     local package_version="$1"; shift
 308     local package_type="$1"; shift
 309     local iteration=1
 310     if [[ $package_version =~ ^0\.1\.([0-9]{14})(\.|$) ]] && \
 311            [[ ${BASH_REMATCH[1]} -le $LICENSE_PACKAGE_TS ]]; then
 312         iteration=2
 313     fi
 314     echo $iteration
 315 }
 316
 317 _build_rails_package_scripts() {
 318     local pkgname="$1"; shift
 319     local destdir="$1"; shift
 320     local srcdir="$RUN_BUILD_PACKAGES_PATH/rails-package-scripts"
 321     for scriptname in postinst prerm postrm; do
 322         cat "$srcdir/$pkgname.sh" "$srcdir/step2.sh" "$srcdir/$scriptname.sh" \
 323             >"$destdir/$scriptname" || return $?
 324     done
 325 }
 326
 327 rails_package_version() {
 328     local pkgname="$1"; shift
 329     local srcdir="$1"; shift
 330     if [[ -n "$ARVADOS_BUILDING_VERSION" ]]; then
 331         echo "$ARVADOS_BUILDING_VERSION"
 332         return
 333     fi
 334     local version="$(version_from_git)"
 335     if [ $pkgname = "arvados-api-server" -o $pkgname = "arvados-workbench" ] ; then
 336         calculate_go_package_version version cmd/arvados-server "$srcdir"
 337     fi
 338     echo $version
 339 }
 340
 341 test_rails_package_presence() {
 342   local pkgname="$1"; shift
 343   local srcdir="$1"; shift
 344
 345   if [[ -n "$ONLY_BUILD" ]] && [[ "$pkgname" != "$ONLY_BUILD" ]] ; then
 346     return 1
 347   fi
 348
 349   tmppwd=`pwd`
 350
 351   cd $srcdir
 352
 353   local version="$(rails_package_version "$pkgname" "$srcdir")"
 354
 355   cd $tmppwd
 356
 357   test_package_presence $pkgname $version rails "$RAILS_PACKAGE_ITERATION"
 358 }
 359
 360 get_complete_package_name() {
 361   # if the errexit flag is set, unset it until this function returns
 362   # otherwise, the shift calls below will abort the program if optional arguments are not supplied
 363   if [ -o errexit ]; then
 364     set +e
 365     trap 'set -e' RETURN
 366   fi
 367   # $__returnvar has the nameref attribute set, which means it is a reference
 368   # to another variable that is passed in as the first argument to this function.
 369   # see https://www.gnu.org/software/bash/manual/html_node/Shell-Parameters.html
 370   local -n __returnvar="$1"; shift
 371   local pkgname="$1"; shift
 372   local version="$1"; shift
 373   local pkgtype="$1"; shift
 374   local iteration="$1"; shift
 375   local arch="$1"; shift
 376   if [[ "$iteration" == "" ]]; then
 377       iteration="$(default_iteration "$pkgname" "$version" "$pkgtype")"
 378   fi
 379
 380   if [[ "$arch" == "" ]]; then
 381     native_arch=$(get_native_arch)
 382     rpm_native_arch="x86_64"
 383     if [[ "$HOSTTYPE" == "aarch64" ]]; then
 384       rpm_native_arch="arm64"
 385     fi
 386     rpm_architecture="$rpm_native_arch"
 387     deb_architecture="$native_arch"
 388
 389     if [[ "$pkgtype" =~ ^(src)$ ]]; then
 390       rpm_architecture="noarch"
 391       deb_architecture="all"
 392     fi
 393   else
 394     rpm_architecture=$arch
 395     deb_architecture=$arch
 396   fi
 397
 398   local complete_pkgname="${pkgname}_$version${iteration:+-$iteration}_$deb_architecture.deb"
 399   if [[ "$FORMAT" == "rpm" ]]; then
 400       # rpm packages get iteration 1 if we don't supply one
 401       iteration=${iteration:-1}
 402       complete_pkgname="$pkgname-$version-${iteration}.$rpm_architecture.rpm"
 403   fi
 404   __returnvar=${complete_pkgname}
 405 }
 406
 407 # Test if the package already exists, if not return 0, if it does return 1
 408 test_package_presence() {
 409     local pkgname="$1"; shift
 410     local version="$1"; shift
 411     local pkgtype="$1"; shift
 412     local iteration="$1"; shift
 413     local arch="$1"; shift
 414     if [[ -n "$ONLY_BUILD" ]] && [[ "$pkgname" != "$ONLY_BUILD" ]] ; then
 415       # arvados-workbench depends on arvados-server at build time, so even when
 416       # only arvados-workbench is being built, we need to build arvados-server too
 417       if [[ "$pkgname" != "arvados-server" ]] || [[ "$ONLY_BUILD" != "arvados-workbench" ]]; then
 418         return 1
 419       fi
 420     fi
 421
 422     local full_pkgname
 423     get_complete_package_name full_pkgname "$pkgname" "$version" "$pkgtype" "$iteration" "$arch"
 424
 425     # See if we can skip building the package, only if it already exists in the
 426     # processed/ directory. If so, move it back to the packages directory to make
 427     # sure it gets picked up by the test and/or upload steps.
 428     # Get the list of packages from the repos
 429
 430     if [[ "$FORCE_BUILD" == "1" ]]; then
 431       echo "Package $full_pkgname build forced with --force-build, building"
 432     elif [[ "$FORMAT" == "deb" ]]; then
 433       declare -A dd
 434       dd[debian10]=buster
 435       dd[debian11]=bullseye
 436       dd[ubuntu1804]=bionic
 437       dd[ubuntu2004]=focal
 438       D=${dd[$TARGET]}
 439       if [ ${pkgname:0:3} = "lib" ]; then
 440         repo_subdir=${pkgname:0:4}
 441       else
 442         repo_subdir=${pkgname:0:1}
 443       fi
 444
 445       repo_pkg_list=$(curl -s -o - http://apt.arvados.org/${D}/pool/main/${repo_subdir}/${pkgname}/)
 446       echo "${repo_pkg_list}" |grep -q ${full_pkgname}
 447       if [ $? -eq 0 ] ; then
 448         echo "Package $full_pkgname exists upstream, not rebuilding, downloading instead!"
 449         curl -s -o "$WORKSPACE/packages/$TARGET/${full_pkgname}" http://apt.arvados.org/${D}/pool/main/${repo_subdir}/${pkgname}/${full_pkgname}
 450         return 1
 451       elif test -f "$WORKSPACE/packages/$TARGET/processed/${full_pkgname}" ; then
 452         echo "Package $full_pkgname exists, not rebuilding!"
 453         return 1
 454       else
 455         echo "Package $full_pkgname not found, building"
 456         return 0
 457       fi
 458     else
 459       centos_repo="http://rpm.arvados.org/CentOS/7/dev/x86_64/"
 460
 461       repo_pkg_list=$(curl -s -o - ${centos_repo})
 462       echo ${repo_pkg_list} |grep -q ${full_pkgname}
 463       if [ $? -eq 0 ]; then
 464         echo "Package $full_pkgname exists upstream, not rebuilding, downloading instead!"
 465         curl -s -o "$WORKSPACE/packages/$TARGET/${full_pkgname}" ${centos_repo}${full_pkgname}
 466         return 1
 467       elif test -f "$WORKSPACE/packages/$TARGET/processed/${full_pkgname}" ; then
 468         echo "Package $full_pkgname exists, not rebuilding!"
 469         return 1
 470       else
 471         echo "Package $full_pkgname not found, building"
 472         return 0
 473       fi
 474     fi
 475 }
 476
 477 handle_rails_package() {
 478     local pkgname="$1"; shift
 479
 480     if [[ -n "$ONLY_BUILD" ]] && [[ "$pkgname" != "$ONLY_BUILD" ]] ; then
 481         return 0
 482     fi
 483     local srcdir="$1"; shift
 484     cd "$srcdir"
 485     local license_path="$1"; shift
 486     local version="$(rails_package_version "$pkgname" "$srcdir")"
 487     echo "$version" >package-build.version
 488     local scripts_dir="$(mktemp --tmpdir -d "$pkgname-XXXXXXXX.scripts")" && \
 489     (
 490         set -e
 491         _build_rails_package_scripts "$pkgname" "$scripts_dir"
 492         cd "$srcdir"
 493         mkdir -p tmp
 494         git rev-parse HEAD >git-commit.version
 495         bundle package --all
 496     )
 497     if [[ 0 != "$?" ]] || ! cd "$WORKSPACE/packages/$TARGET"; then
 498         echo "ERROR: $pkgname package prep failed" >&2
 499         rm -rf "$scripts_dir"
 500         EXITCODE=1
 501         return 1
 502     fi
 503     local railsdir="/var/www/${pkgname%-server}/current"
 504     local -a pos_args=("$srcdir/=$railsdir" "$pkgname" dir "$version")
 505     local license_arg="$license_path=$railsdir/$(basename "$license_path")"
 506     local -a switches=(--after-install "$scripts_dir/postinst"
 507                        --before-remove "$scripts_dir/prerm"
 508                        --after-remove "$scripts_dir/postrm")
 509     if [[ -z "$ARVADOS_BUILDING_VERSION" ]]; then
 510         switches+=(--iteration $RAILS_PACKAGE_ITERATION)
 511     fi
 512     # For some reason fpm excludes need to not start with /.
 513     local exclude_root="${railsdir#/}"
 514     local -a exclude_list=(tmp log coverage Capfile\* \
 515                            config/deploy\* config/application.yml)
 516     # for arvados-workbench, we need to have the (dummy) config/database.yml in the package
 517     if  [[ "$pkgname" != "arvados-workbench" ]]; then
 518       exclude_list+=('config/database.yml')
 519     fi
 520     for exclude in ${exclude_list[@]}; do
 521         switches+=(-x "$exclude_root/$exclude")
 522     done
 523     fpm_build "${srcdir}" "${pos_args[@]}" "${switches[@]}" \
 524               -x "$exclude_root/vendor/cache-*" \
 525               -x "$exclude_root/vendor/bundle" "$@" "$license_arg"
 526     rm -rf "$scripts_dir"
 527 }
 528
 529 # Usage: handle_api_server [amd64|arm64]
 530 handle_api_server () {
 531   local target_arch="${1:-amd64}"; shift
 532
 533   if [[ -n "$ONLY_BUILD" ]] && [[ "$ONLY_BUILD" != "arvados-api-server" ]] ; then
 534     debug_echo -e "Skipping build of arvados-api-server package."
 535     return 0
 536   fi
 537
 538   native_arch=$(get_native_arch)
 539   if [[ "$target_arch" != "$native_arch" ]]; then
 540     echo "Error: no cross compilation support for Rails yet, can not build arvados-api-server for $ARCH"
 541     echo
 542     exit 1
 543   fi
 544
 545   # Build the API server package
 546   test_rails_package_presence arvados-api-server "$WORKSPACE/services/api"
 547   if [[ "$?" == "0" ]]; then
 548     calculate_go_package_version arvados_server_version cmd/arvados-server
 549     arvados_server_iteration=$(default_iteration "arvados-server" "$arvados_server_version" "go")
 550     handle_rails_package arvados-api-server "$WORKSPACE/services/api" \
 551         "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
 552         --description="Arvados API server - Arvados is a free and open source platform for big data science." \
 553         --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
 554   fi
 555 }
 556
 557 # Usage: handle_workbench [amd64|arm64]
 558 handle_workbench () {
 559   local target_arch="${1:-amd64}"; shift
 560   if [[ -n "$ONLY_BUILD" ]] && [[ "$ONLY_BUILD" != "arvados-workbench" ]] ; then
 561     debug_echo -e "Skipping build of arvados-workbench package."
 562     return 0
 563   fi
 564
 565   native_arch=$(get_native_arch)
 566   if [[ "$target_arch" != "$native_arch" ]]; then
 567     echo "Error: no cross compilation support for Rails yet, can not build arvados-workbench for $native_arch"
 568     echo
 569     exit 1
 570   fi
 571
 572   if [[ "$native_arch" != "amd64" ]]; then
 573     echo "Error: building the arvados-workbench package is not yet supported on this architecture ($native_arch)."
 574     echo
 575     exit 1
 576   fi
 577
 578   # Build the workbench server package
 579   test_rails_package_presence arvados-workbench "$WORKSPACE/apps/workbench"
 580   if [[ "$?" == "0" ]] ; then
 581     (
 582         set -e
 583
 584         calculate_go_package_version arvados_server_version cmd/arvados-server
 585         arvados_server_iteration=$(default_iteration "arvados-server" "$arvados_server_version" "go")
 586
 587         # The workbench package has a build-time dependency on the arvados-server
 588         # package for config manipulation, so install it first.
 589         cd $WORKSPACE/cmd/arvados-server
 590         get_complete_package_name arvados_server_pkgname arvados-server ${arvados_server_version} go
 591
 592         arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/${arvados_server_pkgname}"
 593         if [[ ! -e ${arvados_server_pkg_path} ]]; then
 594           arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/processed/${arvados_server_pkgname}"
 595         fi
 596         if [[ "$FORMAT" == "deb" ]]; then
 597           dpkg -i ${arvados_server_pkg_path}
 598         else
 599           rpm -i ${arvados_server_pkg_path}
 600         fi
 601
 602         cd "$WORKSPACE/apps/workbench"
 603
 604         # We need to bundle to be ready even when we build a package without vendor directory
 605         # because asset compilation requires it.
 606         bundle install --system >"$STDOUT_IF_DEBUG"
 607
 608         # clear the tmp directory; the asset generation step will recreate tmp/cache/assets,
 609         # and we want that in the package, so it's easier to not exclude the tmp directory
 610         # from the package - empty it instead.
 611         rm -rf tmp
 612         mkdir tmp
 613
 614         # Set up an appropriate config.yml
 615         arvados-server config-dump -config <(cat /etc/arvados/config.yml 2>/dev/null || echo  "Clusters: {zzzzz: {}}") > /tmp/x
 616         mkdir -p /etc/arvados/
 617         mv /tmp/x /etc/arvados/config.yml
 618         perl -p -i -e 'BEGIN{undef $/;} s/WebDAV(.*?):\n( *)ExternalURL: ""/WebDAV$1:\n$2ExternalURL: "example.com"/g' /etc/arvados/config.yml
 619
 620         ARVADOS_CONFIG=none RAILS_ENV=production RAILS_GROUPS=assets bin/rake npm:install >"$STDOUT_IF_DEBUG"
 621         ARVADOS_CONFIG=none RAILS_ENV=production RAILS_GROUPS=assets bin/rake assets:precompile >"$STDOUT_IF_DEBUG"
 622
 623         # Remove generated configuration files so they don't go in the package.
 624         rm -rf /etc/arvados/
 625     )
 626
 627     if [[ "$?" != "0" ]]; then
 628       echo "ERROR: Asset precompilation failed"
 629       EXITCODE=1
 630     else
 631       handle_rails_package arvados-workbench "$WORKSPACE/apps/workbench" \
 632           "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
 633           --description="Arvados Workbench - Arvados is a free and open source platform for big data science." \
 634           --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
 635     fi
 636   fi
 637 }
 638
 639 # Usage: handle_cwltest [deb|rpm] [amd64|arm64]
 640 handle_cwltest () {
 641   local package_format="$1"; shift
 642   local target_arch="${1:-amd64}"; shift
 643
 644   if [[ -n "$ONLY_BUILD" ]] && [[ "$ONLY_BUILD" != "python3-cwltest" ]] ; then
 645     debug_echo -e "Skipping build of cwltest package."
 646     return 0
 647   fi
 648   cd "$WORKSPACE"
 649   if [[ -e "$WORKSPACE/cwltest" ]]; then
 650     rm -rf "$WORKSPACE/cwltest"
 651   fi
 652   git clone https://github.com/common-workflow-language/cwltest.git
 653   # signal to our build script that we want a cwltest executable installed in /usr/bin/
 654   mkdir cwltest/bin && touch cwltest/bin/cwltest
 655   fpm_build_virtualenv "cwltest" "cwltest" "$package_format" "$target_arch"
 656   # The python->python3 metapackage
 657   build_metapackage "cwltest" "cwltest"
 658   cd "$WORKSPACE"
 659   rm -rf "$WORKSPACE/cwltest"
 660 }
 661
 662 # Usage: handle_arvados_src
 663 handle_arvados_src () {
 664   if [[ -n "$ONLY_BUILD" ]] && [[ "$ONLY_BUILD" != "arvados-src" ]] ; then
 665     debug_echo -e "Skipping build of arvados-src package."
 666     return 0
 667   fi
 668   # arvados-src
 669   (
 670       cd "$WORKSPACE"
 671       COMMIT_HASH=$(format_last_commit_here "%H")
 672       arvados_src_version="$(version_from_git)"
 673
 674       cd $WORKSPACE/packages/$TARGET
 675       test_package_presence arvados-src "$arvados_src_version" src ""
 676
 677       if [[ "$?" == "0" ]]; then
 678         cd "$WORKSPACE"
 679         SRC_BUILD_DIR=$(mktemp -d)
 680         # mktemp creates the directory with 0700 permissions by default
 681         chmod 755 $SRC_BUILD_DIR
 682         git clone $DASHQ_UNLESS_DEBUG "$WORKSPACE/.git" "$SRC_BUILD_DIR"
 683         cd "$SRC_BUILD_DIR"
 684
 685         # go into detached-head state
 686         git checkout $DASHQ_UNLESS_DEBUG "$COMMIT_HASH"
 687         echo "$COMMIT_HASH" >git-commit.version
 688
 689         cd $WORKSPACE/packages/$TARGET
 690         fpm_build "$WORKSPACE" $SRC_BUILD_DIR/=/usr/local/arvados/src arvados-src 'dir' "$arvados_src_version" "--exclude=usr/local/arvados/src/.git" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=The Arvados source code" "--architecture=all"
 691
 692         rm -rf "$SRC_BUILD_DIR"
 693       fi
 694   )
 695 }
 696
 697 # Usage: handle_libarvados_perl
 698 handle_libarvados_perl () {
 699   if [[ -n "$ONLY_BUILD" ]] || [[ "$ONLY_BUILD" != "libarvados-perl" ]] ; then
 700     debug_echo -e "Skipping build of libarvados-perl package."
 701     return 0
 702   fi
 703   cd "$WORKSPACE/sdk/perl"
 704   libarvados_perl_version="$(version_from_git)"
 705
 706   cd $WORKSPACE/packages/$TARGET
 707   test_package_presence libarvados-perl "$libarvados_perl_version"
 708
 709   if [[ "$?" == "0" ]]; then
 710     cd "$WORKSPACE/sdk/perl"
 711
 712     if [[ -e Makefile ]]; then
 713       make realclean >"$STDOUT_IF_DEBUG"
 714     fi
 715     find -maxdepth 1 \( -name 'MANIFEST*' -or -name "libarvados-perl*.$FORMAT" \) \
 716         -delete
 717     rm -rf install
 718
 719     perl Makefile.PL INSTALL_BASE=install >"$STDOUT_IF_DEBUG" && \
 720         make install INSTALLDIRS=perl >"$STDOUT_IF_DEBUG" && \
 721         fpm_build "$WORKSPACE/sdk/perl" install/lib/=/usr/share libarvados-perl \
 722         dir "$(version_from_git)" install/man/=/usr/share/man \
 723         "$WORKSPACE/apache-2.0.txt=/usr/share/doc/libarvados-perl/apache-2.0.txt" && \
 724         mv --no-clobber libarvados-perl*.$FORMAT "$WORKSPACE/packages/$TARGET/"
 725   fi
 726 }
 727
 728 # Build python packages with a virtualenv built-in
 729 # Usage: fpm_build_virtualenv arvados-python-client sdk/python [deb|rpm] [amd64|arm64]
 730 fpm_build_virtualenv () {
 731   local pkg=$1; shift
 732   local pkg_dir=$1; shift
 733   local package_format="$1"; shift
 734   local target_arch="${1:-amd64}"; shift
 735
 736   native_arch=$(get_native_arch)
 737
 738   if [[ "$pkg" != "arvados-docker-cleaner" ]]; then
 739     PYTHON_PKG=$PYTHON3_PKG_PREFIX-$pkg
 740   else
 741     # Exception to our package naming convention
 742     PYTHON_PKG=$pkg
 743   fi
 744
 745   if [[ -n "$ONLY_BUILD" ]] && [[ "$PYTHON_PKG" != "$ONLY_BUILD" ]]; then
 746     # arvados-python-client sdist should always be built if we are building a
 747     # python package.
 748     if [[ "$ONLY_BUILD" != "python3-arvados-cwl-runner" ]] &&
 749        [[ "$ONLY_BUILD" != "python3-arvados-fuse" ]] &&
 750        [[ "$ONLY_BUILD" != "python3-crunchstat-summary" ]] &&
 751        [[ "$ONLY_BUILD" != "arvados-docker-cleaner" ]] &&
 752        [[ "$ONLY_BUILD" != "python3-arvados-user-activity" ]]; then
 753       debug_echo -e "Skipping build of $pkg package."
 754       return 0
 755     fi
 756   fi
 757
 758   if [[ -n "$target_arch" ]] && [[ "$native_arch" == "$target_arch" ]]; then
 759       fpm_build_virtualenv_worker "$pkg" "$pkg_dir" "$package_format" "$native_arch" "$target_arch"
 760   elif [[ -z "$target_arch" ]]; then
 761     fpm_build_virtualenv_worker "$pkg" "$pkg_dir" "$package_format" "$native_arch" "$native_arch"
 762   else
 763     echo "Error: no cross compilation support for Python yet, can not build $pkg for $target_arch"
 764     return 1
 765   fi
 766 }
 767
 768 # Build python packages with a virtualenv built-in
 769 # Usage: fpm_build_virtualenv_worker arvados-python-client sdk/python python3 [deb|rpm] [amd64|arm64] [amd64|arm64]
 770 fpm_build_virtualenv_worker () {
 771   PKG=$1; shift
 772   PKG_DIR=$1; shift
 773   local package_format="$1"; shift
 774   local native_arch="${1:-amd64}"; shift
 775   local target_arch=${1:-amd64}; shift
 776
 777   # Set up
 778   STDOUT_IF_DEBUG=/dev/null
 779   STDERR_IF_DEBUG=/dev/null
 780   DASHQ_UNLESS_DEBUG=-q
 781   if [[ "$DEBUG" != "0" ]]; then
 782       STDOUT_IF_DEBUG=/dev/stdout
 783       STDERR_IF_DEBUG=/dev/stderr
 784       DASHQ_UNLESS_DEBUG=
 785   fi
 786   if [[ "$ARVADOS_BUILDING_ITERATION" == "" ]]; then
 787     ARVADOS_BUILDING_ITERATION=1
 788   fi
 789
 790   local python=python3
 791   pip=pip3
 792   PACKAGE_PREFIX=$PYTHON3_PKG_PREFIX
 793
 794   if [[ "$PKG" != "arvados-docker-cleaner" ]]; then
 795     PYTHON_PKG=$PACKAGE_PREFIX-$PKG
 796   else
 797     # Exception to our package naming convention
 798     PYTHON_PKG=$PKG
 799   fi
 800
 801   cd $WORKSPACE/$PKG_DIR
 802
 803   rm -rf dist/*
 804
 805   # Get the latest setuptools
 806   if ! $pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'; then
 807     echo "Error, unable to upgrade setuptools with"
 808     echo "  $pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'"
 809     exit 1
 810   fi
 811   # filter a useless warning (when building the cwltest package) from the stderr output
 812   if ! $python setup.py $DASHQ_UNLESS_DEBUG sdist 2> >(grep -v 'warning: no previously-included files matching'); then
 813     echo "Error, unable to run $python setup.py sdist for $PKG"
 814     exit 1
 815   fi
 816
 817   PACKAGE_PATH=`(cd dist; ls *tar.gz)`
 818
 819   if [[ "arvados-python-client" == "$PKG" ]]; then
 820     PYSDK_PATH=`pwd`/dist/
 821   fi
 822
 823   if [[ -n "$ONLY_BUILD" ]] && [[ "$PYTHON_PKG" != "$ONLY_BUILD" ]] && [[ "$PKG" != "$ONLY_BUILD" ]]; then
 824     return 0
 825   fi
 826
 827   # Determine the package version from the generated sdist archive
 828   if [[ -n "$ARVADOS_BUILDING_VERSION" ]] ; then
 829       UNFILTERED_PYTHON_VERSION=$ARVADOS_BUILDING_VERSION
 830       PYTHON_VERSION=$(echo -n $ARVADOS_BUILDING_VERSION | sed s/~dev/.dev/g | sed s/~rc/rc/g)
 831   else
 832       PYTHON_VERSION=$(awk '($1 == "Version:"){print $2}' *.egg-info/PKG-INFO)
 833       UNFILTERED_PYTHON_VERSION=$(echo -n $PYTHON_VERSION | sed s/\.dev/~dev/g |sed 's/\([0-9]\)rc/\1~rc/g')
 834   fi
 835
 836   # See if we actually need to build this package; does it exist already?
 837   # We can't do this earlier than here, because we need PYTHON_VERSION...
 838   # This isn't so bad; the sdist call above is pretty quick compared to
 839   # the invocation of virtualenv and fpm, below.
 840   if ! test_package_presence "$PYTHON_PKG" "$UNFILTERED_PYTHON_VERSION" "$python" "$ARVADOS_BUILDING_ITERATION" "$target_arch"; then
 841     return 0
 842   fi
 843
 844   echo "Building $package_format ($target_arch) package for $PKG from $PKG_DIR"
 845
 846   # Package the sdist in a virtualenv
 847   echo "Creating virtualenv..."
 848
 849   cd dist
 850
 851   rm -rf build
 852   rm -f $PYTHON_PKG*deb
 853   echo "virtualenv version: `virtualenv --version`"
 854   virtualenv_command="virtualenv --python `which $python` $DASHQ_UNLESS_DEBUG build/usr/share/$python/dist/$PYTHON_PKG"
 855
 856   if ! $virtualenv_command; then
 857     echo "Error, unable to run"
 858     echo "  $virtualenv_command"
 859     exit 1
 860   fi
 861
 862   if ! build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U pip; then
 863     echo "Error, unable to upgrade pip with"
 864     echo "  build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U pip"
 865     exit 1
 866   fi
 867   echo "pip version:        `build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip --version`"
 868
 869   if ! build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'; then
 870     echo "Error, unable to upgrade setuptools with"
 871     echo "  build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'"
 872     exit 1
 873   fi
 874   echo "setuptools version: `build/usr/share/$python/dist/$PYTHON_PKG/bin/$python -c 'import setuptools; print(setuptools.__version__)'`"
 875
 876   if ! build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U wheel; then
 877     echo "Error, unable to upgrade wheel with"
 878     echo "  build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U wheel"
 879     exit 1
 880   fi
 881   echo "wheel version:      `build/usr/share/$python/dist/$PYTHON_PKG/bin/wheel version`"
 882
 883   if [[ "$TARGET" != "centos7" ]] || [[ "$PYTHON_PKG" != "python-arvados-fuse" ]]; then
 884     build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -f $PYSDK_PATH $PACKAGE_PATH
 885   else
 886     # centos7 needs these special tweaks to install python-arvados-fuse
 887     build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG docutils
 888     PYCURL_SSL_LIBRARY=nss build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -f $PYSDK_PATH $PACKAGE_PATH
 889   fi
 890
 891   if [[ "$?" != "0" ]]; then
 892     echo "Error, unable to run"
 893     echo "  build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -f $PYSDK_PATH $PACKAGE_PATH"
 894     exit 1
 895   fi
 896
 897   cd build/usr/share/$python/dist/$PYTHON_PKG/
 898
 899   # Replace the shebang lines in all python scripts, and handle the activate
 900   # scripts too. This is a functional replacement of the 237 line
 901   # virtualenv_tools.py script that doesn't work in python3 without serious
 902   # patching, minus the parts we don't need (modifying pyc files, etc).
 903   for binfile in `ls bin/`; do
 904     if ! file --mime bin/$binfile |grep -q binary; then
 905       # Not a binary file
 906       if [[ "$binfile" =~ ^activate(.csh|.fish|)$ ]]; then
 907         # these 'activate' scripts need special treatment
 908         sed -i "s/VIRTUAL_ENV=\".*\"/VIRTUAL_ENV=\"\/usr\/share\/$python\/dist\/$PYTHON_PKG\"/" bin/$binfile
 909         sed -i "s/VIRTUAL_ENV \".*\"/VIRTUAL_ENV \"\/usr\/share\/$python\/dist\/$PYTHON_PKG\"/" bin/$binfile
 910       else
 911         if grep -q -E '^#!.*/bin/python\d?' bin/$binfile; then
 912           # Replace shebang line
 913           sed -i "1 s/^.*$/#!\/usr\/share\/$python\/dist\/$PYTHON_PKG\/bin\/python/" bin/$binfile
 914         fi
 915       fi
 916     fi
 917   done
 918
 919   cd - >$STDOUT_IF_DEBUG
 920
 921   find build -iname '*.pyc' -exec rm {} \;
 922   find build -iname '*.pyo' -exec rm {} \;
 923
 924   # Finally, generate the package
 925   echo "Creating package..."
 926
 927   declare -a COMMAND_ARR=("fpm" "-s" "dir" "-t" "$package_format")
 928
 929   if [[ -n "$target_arch" ]] && [[ "$target_arch" != "amd64" ]]; then
 930     COMMAND_ARR+=("-a$target_arch")
 931   fi
 932
 933   if [[ "$MAINTAINER" != "" ]]; then
 934     COMMAND_ARR+=('--maintainer' "$MAINTAINER")
 935   fi
 936
 937   if [[ "$VENDOR" != "" ]]; then
 938     COMMAND_ARR+=('--vendor' "$VENDOR")
 939   fi
 940
 941   COMMAND_ARR+=('--url' 'https://arvados.org')
 942
 943   # Get description
 944   DESCRIPTION=`grep '\sdescription' $WORKSPACE/$PKG_DIR/setup.py|cut -f2 -d=|sed -e "s/[',\\"]//g"`
 945   COMMAND_ARR+=('--description' "$DESCRIPTION")
 946
 947   # Get license string
 948   LICENSE_STRING=`grep license $WORKSPACE/$PKG_DIR/setup.py|cut -f2 -d=|sed -e "s/[',\\"]//g"`
 949   COMMAND_ARR+=('--license' "$LICENSE_STRING")
 950
 951   if [[ "$package_format" == "rpm" ]]; then
 952     # Make sure to conflict with the old rh-python36 packages we used to publish
 953     COMMAND_ARR+=('--conflicts' "rh-python36-python-$PKG")
 954   fi
 955
 956   if [[ "$DEBUG" != "0" ]]; then
 957     COMMAND_ARR+=('--verbose' '--log' 'info')
 958   fi
 959
 960   COMMAND_ARR+=('-v' $(echo -n "$PYTHON_VERSION" | sed s/.dev/~dev/g | sed s/rc/~rc/g))
 961   COMMAND_ARR+=('--iteration' "$ARVADOS_BUILDING_ITERATION")
 962   COMMAND_ARR+=('-n' "$PYTHON_PKG")
 963   COMMAND_ARR+=('-C' "build")
 964
 965   systemd_unit="$WORKSPACE/$PKG_DIR/$PKG.service"
 966   if [[ -e "${systemd_unit}" ]]; then
 967     COMMAND_ARR+=('--after-install' "${WORKSPACE}/build/go-python-package-scripts/postinst")
 968     COMMAND_ARR+=('--before-remove' "${WORKSPACE}/build/go-python-package-scripts/prerm")
 969   fi
 970
 971   COMMAND_ARR+=('--depends' "$PYTHON3_PACKAGE")
 972
 973   # avoid warning
 974   COMMAND_ARR+=('--deb-no-default-config-files')
 975
 976   # Append --depends X and other arguments specified by fpm-info.sh in
 977   # the package source dir. These are added last so they can override
 978   # the arguments added by this script.
 979   declare -a fpm_args=()
 980   declare -a fpm_depends=()
 981
 982   fpminfo="$WORKSPACE/$PKG_DIR/fpm-info.sh"
 983   if [[ -e "$fpminfo" ]]; then
 984     echo "Loading fpm overrides from $fpminfo"
 985     if ! source "$fpminfo"; then
 986       echo "Error, unable to source $WORKSPACE/$PKG_DIR/fpm-info.sh for $PKG"
 987       exit 1
 988     fi
 989   fi
 990
 991   for i in "${fpm_depends[@]}"; do
 992     COMMAND_ARR+=('--depends' "$i")
 993   done
 994
 995   for i in "${fpm_depends[@]}"; do
 996     COMMAND_ARR+=('--replaces' "python-$PKG")
 997   done
 998
 999   # make sure the systemd service file ends up in the right place
1000   # used by arvados-docker-cleaner
1001   if [[ -e "${systemd_unit}" ]]; then
1002     COMMAND_ARR+=("usr/share/$python/dist/$PKG/share/doc/$PKG/$PKG.service=/lib/systemd/system/$PKG.service")
1003   fi
1004
1005   COMMAND_ARR+=("${fpm_args[@]}")
1006
1007   # Make sure to install all our package binaries in /usr/bin.
1008   # We have to walk $WORKSPACE/$PKG_DIR/bin rather than
1009   # $WORKSPACE/build/usr/share/$python/dist/$PYTHON_PKG/bin/ to get the list
1010   # because the latter also includes all the python binaries for the virtualenv.
1011   # We have to take the copies of our binaries from the latter directory, though,
1012   # because those are the ones we rewrote the shebang line of, above.
1013   if [[ -e "$WORKSPACE/$PKG_DIR/bin" ]]; then
1014     for binary in `ls $WORKSPACE/$PKG_DIR/bin`; do
1015       COMMAND_ARR+=("usr/share/$python/dist/$PYTHON_PKG/bin/$binary=/usr/bin/")
1016     done
1017   fi
1018
1019   # the python3-arvados-cwl-runner package comes with cwltool, expose that version
1020   if [[ -e "$WORKSPACE/$PKG_DIR/dist/build/usr/share/$python/dist/$PYTHON_PKG/bin/cwltool" ]]; then
1021     COMMAND_ARR+=("usr/share/$python/dist/$PYTHON_PKG/bin/cwltool=/usr/bin/")
1022   fi
1023
1024   COMMAND_ARR+=(".")
1025
1026   debug_echo -e "\n${COMMAND_ARR[@]}\n"
1027
1028   FPM_RESULTS=$("${COMMAND_ARR[@]}")
1029   FPM_EXIT_CODE=$?
1030
1031   # if something went wrong and debug is off, print out the fpm command that errored
1032   if ! fpm_verify $FPM_EXIT_CODE $FPM_RESULTS && [[ "$STDOUT_IF_DEBUG" == "/dev/null" ]]; then
1033     echo "fpm returned an error executing the command:"
1034     echo
1035     echo -e "\n${COMMAND_ARR[@]}\n"
1036   else
1037     echo `ls *$package_format`
1038     mv $WORKSPACE/$PKG_DIR/dist/*$package_format $WORKSPACE/packages/$TARGET/
1039   fi
1040   echo
1041 }
1042
1043 # build_metapackage builds meta packages that help with the python to python 3 package migration
1044 build_metapackage() {
1045   # base package name (e.g. arvados-python-client)
1046   BASE_NAME=$1
1047   shift
1048   PKG_DIR=$1
1049   shift
1050
1051   if [[ -n "$ONLY_BUILD" ]] && [[ "python-$BASE_NAME" != "$ONLY_BUILD" ]]; then
1052     return 0
1053   fi
1054
1055   if [[ "$ARVADOS_BUILDING_ITERATION" == "" ]]; then
1056     ARVADOS_BUILDING_ITERATION=1
1057   fi
1058
1059   if [[ -z "$ARVADOS_BUILDING_VERSION" ]]; then
1060     cd $WORKSPACE/$PKG_DIR
1061     pwd
1062     rm -rf dist/*
1063
1064     # Get the latest setuptools
1065     if ! pip3 install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'; then
1066       echo "Error, unable to upgrade setuptools with XY"
1067       echo "  pip3 install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'"
1068       exit 1
1069     fi
1070     # filter a useless warning (when building the cwltest package) from the stderr output
1071     if ! python3 setup.py $DASHQ_UNLESS_DEBUG sdist 2> >(grep -v 'warning: no previously-included files matching'); then
1072       echo "Error, unable to run python3 setup.py sdist for $PKG"
1073       exit 1
1074     fi
1075
1076     PYTHON_VERSION=$(awk '($1 == "Version:"){print $2}' *.egg-info/PKG-INFO)
1077     UNFILTERED_PYTHON_VERSION=$(echo -n $PYTHON_VERSION | sed s/\.dev/~dev/g |sed 's/\([0-9]\)rc/\1~rc/g')
1078
1079   else
1080     UNFILTERED_PYTHON_VERSION=$ARVADOS_BUILDING_VERSION
1081     PYTHON_VERSION=$(echo -n $ARVADOS_BUILDING_VERSION | sed s/~dev/.dev/g | sed s/~rc/rc/g)
1082   fi
1083
1084   cd - >$STDOUT_IF_DEBUG
1085   if [[ -d "$BASE_NAME" ]]; then
1086     rm -rf $BASE_NAME
1087   fi
1088   mkdir $BASE_NAME
1089   cd $BASE_NAME
1090
1091   if [[ "$FORMAT" == "deb" ]]; then
1092     cat >ns-control <<EOF
1093 Section: misc
1094 Priority: optional
1095 Standards-Version: 3.9.2
1096
1097 Package: python-${BASE_NAME}
1098 Version: ${PYTHON_VERSION}-${ARVADOS_BUILDING_ITERATION}
1099 Maintainer: Arvados Package Maintainers <packaging@arvados.org>
1100 Depends: python3-${BASE_NAME}
1101 Description: metapackage to ease the upgrade to the Pyhon 3 version of ${BASE_NAME}
1102  This package is a metapackage that will automatically install the new version of
1103  ${BASE_NAME} which is Python 3 based and has a different name.
1104 EOF
1105
1106     /usr/bin/equivs-build ns-control
1107     if [[ $? -ne 0 ]]; then
1108       echo "Error running 'equivs-build ns-control', is the 'equivs' package installed?"
1109       return 1
1110     fi
1111   elif [[ "$FORMAT" == "rpm" ]]; then
1112     cat >meta.spec <<EOF
1113 Summary: metapackage to ease the upgrade to the Python 3 version of ${BASE_NAME}
1114 Name: python-${BASE_NAME}
1115 Version: ${PYTHON_VERSION}
1116 Release: ${ARVADOS_BUILDING_ITERATION}
1117 License: distributable
1118
1119 Requires: python3-${BASE_NAME}
1120
1121 %description
1122 This package is a metapackage that will automatically install the new version of
1123 python-${BASE_NAME} which is Python 3 based and has a different name.
1124
1125 %prep
1126
1127 %build
1128
1129 %clean
1130
1131 %install
1132
1133 %post
1134
1135 %files
1136
1137
1138 %changelog
1139 * Mon Apr 12 2021 Arvados Package Maintainers <packaging@arvados.org>
1140 - initial release
1141 EOF
1142
1143     /usr/bin/rpmbuild -ba meta.spec
1144     if [[ $? -ne 0 ]]; then
1145       echo "Error running 'rpmbuild -ba meta.spec', is the 'rpm-build' package installed?"
1146       return 1
1147     else
1148       mv /root/rpmbuild/RPMS/x86_64/python-${BASE_NAME}*.${FORMAT} .
1149       if [[ $? -ne 0 ]]; then
1150         echo "Error finding rpm file output of 'rpmbuild -ba meta.spec'"
1151         return 1
1152       fi
1153     fi
1154   else
1155     echo "Unknown format"
1156     return 1
1157   fi
1158
1159   if [[ $EXITCODE -ne 0 ]]; then
1160     return 1
1161   else
1162     echo `ls *$FORMAT`
1163     mv *$FORMAT $WORKSPACE/packages/$TARGET/
1164   fi
1165
1166   # clean up
1167   cd - >$STDOUT_IF_DEBUG
1168   if [[ -d "$BASE_NAME" ]]; then
1169     rm -rf $BASE_NAME
1170   fi
1171 }
1172
1173 # Build packages for everything
1174 fpm_build () {
1175   # Source dir where fpm-info.sh (if any) will be found.
1176   SRC_DIR=$1
1177   shift
1178   # The package source.  Depending on the source type, this can be a
1179   # path, or the name of the package in an upstream repository (e.g.,
1180   # pip).
1181   PACKAGE=$1
1182   shift
1183   # The name of the package to build.
1184   PACKAGE_NAME=$1
1185   shift
1186   # The type of source package.  Passed to fpm -s.  Default "dir".
1187   PACKAGE_TYPE=${1:-dir}
1188   shift
1189   # Optional: the package version number.  Passed to fpm -v.
1190   VERSION=$1
1191   shift
1192
1193   if [[ -n "$ONLY_BUILD" ]] && [[ "$PACKAGE_NAME" != "$ONLY_BUILD" ]] && [[ "$PACKAGE" != "$ONLY_BUILD" ]] ; then
1194     # arvados-workbench depends on arvados-server at build time, so even when
1195     # only arvados-workbench is being built, we need to build arvados-server too
1196     if [[ "$PACKAGE_NAME" != "arvados-server" ]] || [[ "$ONLY_BUILD" != "arvados-workbench" ]]; then
1197       return 0
1198     fi
1199   fi
1200
1201   local default_iteration_value="$(default_iteration "$PACKAGE" "$VERSION" "$PACKAGE_TYPE")"
1202
1203   declare -a COMMAND_ARR=("fpm" "-s" "$PACKAGE_TYPE" "-t" "$FORMAT")
1204   if [ python = "$PACKAGE_TYPE" ] && [ deb = "$FORMAT" ]; then
1205       # Dependencies are built from setup.py.  Since setup.py will never
1206       # refer to Debian package iterations, it doesn't make sense to
1207       # enforce those in the .deb dependencies.
1208       COMMAND_ARR+=(--deb-ignore-iteration-in-dependencies)
1209   fi
1210
1211   if [[ "$DEBUG" != "0" ]]; then
1212     COMMAND_ARR+=('--verbose' '--log' 'info')
1213   fi
1214
1215   if [[ -n "$PACKAGE_NAME" ]]; then
1216     COMMAND_ARR+=('-n' "$PACKAGE_NAME")
1217   fi
1218
1219   if [[ "$MAINTAINER" != "" ]]; then
1220     COMMAND_ARR+=('--maintainer' "$MAINTAINER")
1221   fi
1222
1223   if [[ "$VENDOR" != "" ]]; then
1224     COMMAND_ARR+=('--vendor' "$VENDOR")
1225   fi
1226
1227   if [[ "$VERSION" != "" ]]; then
1228     COMMAND_ARR+=('-v' "$VERSION")
1229   fi
1230   if [[ -n "$default_iteration_value" ]]; then
1231       # We can always add an --iteration here.  If another one is specified in $@,
1232       # that will take precedence, as desired.
1233       COMMAND_ARR+=(--iteration "$default_iteration_value")
1234   fi
1235
1236   # Append --depends X and other arguments specified by fpm-info.sh in
1237   # the package source dir. These are added last so they can override
1238   # the arguments added by this script.
1239   declare -a fpm_args=()
1240   declare -a build_depends=()
1241   declare -a fpm_depends=()
1242   declare -a fpm_conflicts=()
1243   declare -a fpm_exclude=()
1244   if [[ ! -d "$SRC_DIR" ]]; then
1245       echo >&2 "BUG: looking in wrong dir for fpm-info.sh: $pkgdir"
1246       exit 1
1247   fi
1248   fpminfo="${SRC_DIR}/fpm-info.sh"
1249   if [[ -e "$fpminfo" ]]; then
1250       debug_echo "Loading fpm overrides from $fpminfo"
1251       source "$fpminfo"
1252   fi
1253   for pkg in "${build_depends[@]}"; do
1254       if [[ $TARGET =~ debian|ubuntu ]]; then
1255           pkg_deb=$(ls "$WORKSPACE/packages/$TARGET/$pkg_"*.deb | sort -rg | awk 'NR==1')
1256           if [[ -e $pkg_deb ]]; then
1257               echo "Installing build_dep $pkg from $pkg_deb"
1258               dpkg -i "$pkg_deb"
1259           else
1260               echo "Attemping to install build_dep $pkg using apt-get"
1261               apt-get install -y "$pkg"
1262           fi
1263           apt-get -y -f install
1264       else
1265           pkg_rpm=$(ls "$WORKSPACE/packages/$TARGET/$pkg"-[0-9]*.rpm | sort -rg | awk 'NR==1')
1266           if [[ -e $pkg_rpm ]]; then
1267               echo "Installing build_dep $pkg from $pkg_rpm"
1268               rpm -i "$pkg_rpm"
1269           else
1270               echo "Attemping to install build_dep $pkg"
1271               rpm -i "$pkg"
1272           fi
1273       fi
1274   done
1275   for i in "${fpm_depends[@]}"; do
1276     COMMAND_ARR+=('--depends' "$i")
1277   done
1278   for i in "${fpm_conflicts[@]}"; do
1279     COMMAND_ARR+=('--conflicts' "$i")
1280   done
1281   for i in "${fpm_exclude[@]}"; do
1282     COMMAND_ARR+=('--exclude' "$i")
1283   done
1284
1285   COMMAND_ARR+=("${fpm_args[@]}")
1286
1287   # Append remaining function arguments directly to fpm's command line.
1288   for i; do
1289     COMMAND_ARR+=("$i")
1290   done
1291
1292   COMMAND_ARR+=("$PACKAGE")
1293
1294   debug_echo -e "\n${COMMAND_ARR[@]}\n"
1295
1296   FPM_RESULTS=$("${COMMAND_ARR[@]}")
1297   FPM_EXIT_CODE=$?
1298
1299   fpm_verify $FPM_EXIT_CODE $FPM_RESULTS
1300
1301   # if something went wrong and debug is off, print out the fpm command that errored
1302   if [[ 0 -ne $? ]] && [[ "$STDOUT_IF_DEBUG" == "/dev/null" ]]; then
1303     echo -e "\n${COMMAND_ARR[@]}\n"
1304   fi
1305 }
1306
1307 # verify build results
1308 fpm_verify () {
1309   FPM_EXIT_CODE=$1
1310   shift
1311   FPM_RESULTS=$@
1312
1313   FPM_PACKAGE_NAME=''
1314   if [[ $FPM_RESULTS =~ ([A-Za-z0-9_\.-]*\.)(deb|rpm) ]]; then
1315     FPM_PACKAGE_NAME=${BASH_REMATCH[1]}${BASH_REMATCH[2]}
1316   fi
1317
1318   if [[ "$FPM_PACKAGE_NAME" == "" ]]; then
1319     EXITCODE=1
1320     echo
1321     echo "Error: $PACKAGE: Unable to figure out package name from fpm results:"
1322     echo
1323     echo $FPM_RESULTS
1324     echo
1325     return 1
1326   elif [[ "$FPM_RESULTS" =~ "File already exists" ]]; then
1327     echo "Package $FPM_PACKAGE_NAME exists, not rebuilding"
1328     return 0
1329   elif [[ 0 -ne "$FPM_EXIT_CODE" ]]; then
1330     EXITCODE=1
1331     echo "Error building package for $1:\n $FPM_RESULTS"
1332     return 1
1333   fi
1334 }
1335
1336 install_package() {
1337   PACKAGES=$@
1338   if [[ "$FORMAT" == "deb" ]]; then
1339     $SUDO apt-get install $PACKAGES --yes
1340   elif [[ "$FORMAT" == "rpm" ]]; then
1341     $SUDO yum -q -y install $PACKAGES
1342   fi
1343 }
1344
1345 title() {
1346     printf '%s %s\n' "=======" "$1"
1347 }
1348
1349 checkexit() {
1350     if [[ "$1" != "0" ]]; then
1351         title "$2 -- FAILED"
1352         failures+=("$2 (`timer`)")
1353     else
1354         successes+=("$2 (`timer`)")
1355     fi
1356 }
1357
1358 timer_reset() {
1359     t0=$SECONDS
1360 }
1361
1362 timer() {
1363     if [[ -n "$t0" ]]; then
1364         echo -n "$(($SECONDS - $t0))s"
1365     fi
1366 }
1367
1368 report_outcomes() {
1369     for x in "${successes[@]}"
1370     do
1371         echo "Pass: $x"
1372     done
1373
1374     if [[ ${#failures[@]} == 0 ]]
1375     then
1376         if [[ ${#successes[@]} != 0 ]]; then
1377            echo "All test suites passed."
1378         fi
1379     else
1380         echo "Failures (${#failures[@]}):"
1381         for x in "${failures[@]}"
1382         do
1383             echo "Fail: $x"
1384         done
1385     fi
1386 }