18323: Revise in line with the cwltool version of this feature
[arvados.git] / doc / user / cwl / federated / extract.cwl
1 cwlVersion: v1.0
2 class: CommandLineTool
3 requirements:
4   SchemaDefRequirement:
5     types:
6       - $import: FileOnCluster.yml
7 inputs:
8   select_column: string
9   select_values: File
10   dataset: 'FileOnCluster.yml#FileOnCluster'
11   extract_py:
12     type: File
13     default:
14       class: File
15       location: extract.py
16 outputs:
17   out:
18     type: File
19     outputBinding:
20       glob: extracted.csv
21
22 arguments: [python, $(inputs.extract_py), $(inputs.select_column), $(inputs.select_values), $(inputs.dataset.file), $(inputs.dataset.cluster)]