doc/user/api.md

   1 ---
   2 layout: default
   3 navsection: userguide
   4 title: "Reference: API"
   5 navorder: 90
   6 ---
   7
   8 # API Reference
   9
  10 ### Concepts
  11
  12 * Each API uses the same [authentication mechanism](api-authentication.html)
  13 * Resources in requests and responses adhere to a [common structure](api-resources.html)
  14 * API transactions use common [REST methods](api-methods.html)
  15
  16 ### Resources
  17
  18 * [ApiClients](api-ApiClients.html)
  19 * [ApiClientAuthorizations](api-ApiClientAuthorizations.html)
  20 * [Collections](api-Collections.html)
  21 * [Files](api-Files.html)
  22 * [Jobs](api-Jobs.html)
  23 * [JobTasks](api-JobTasks.html)
  24 * [Links](api-Links.html)
  25 * [Logs](api-Logs.html)
  26 * [People](api-People.html)
  27 * [PipelineTemplates](api-PipelineTemplates.html)
  28 * [PipelineInstances](api-PipelineInstances.html)
  29 * [Groups](api-Groups.html)
  30 * [Specimens](api-Specimens.html)
  31 * [Users](api-Users.html)
  32 * [Variants](api-Variants.html)
  33 * [VariantAnnotations](api-VariantAnnotations.html)
  34 * [VariantCalls](api-VariantCalls.html)