2 uuid: zzzzz-xvhdp-cr4queuedcontnr
3 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
7 created_at: 2016-01-11 11:11:11.111111111 Z
8 updated_at: 2016-01-11 11:11:11.111111111 Z
9 modified_at: 2016-01-11 11:11:11.111111111 Z
10 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
14 command: ["echo", "hello"]
15 container_uuid: zzzzz-dz642-queuedcontainer
21 uuid: zzzzz-xvhdp-cr4runningcntnr
22 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
26 created_at: 2016-01-11 11:11:11.111111111 Z
27 updated_at: 2016-01-11 11:11:11.111111111 Z
28 modified_at: 2016-01-11 11:11:11.111111111 Z
29 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
33 command: ["echo", "hello"]
34 container_uuid: zzzzz-dz642-runningcontainr
40 uuid: zzzzz-xvhdp-cr4runningcntn2
41 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
45 created_at: 2016-01-11 11:11:11.111111111 Z
46 updated_at: 2016-01-11 11:11:11.111111111 Z
47 modified_at: 2016-01-12 11:11:11.111111111 Z
48 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
52 command: ["echo", "hello"]
53 container_uuid: zzzzz-dz642-runningcontain2
59 uuid: zzzzz-xvhdp-cr4completedctr
60 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
61 name: completed container request
64 created_at: <%= 2.minute.ago.to_s(:db) %>
65 updated_at: <%= 1.minute.ago.to_s(:db) %>
66 modified_at: <%= 1.minute.ago.to_s(:db) %>
67 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
71 command: ["echo", "hello"]
72 container_uuid: zzzzz-dz642-compltcontainer
78 uuid: zzzzz-xvhdp-cr4completedcr2
79 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
83 created_at: 2016-01-11 11:11:11.111111111 Z
84 updated_at: 2016-01-11 11:11:11.111111111 Z
85 modified_at: 2016-01-11 11:11:11.111111111 Z
86 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
90 command: ["echo", "hello"]
91 container_uuid: zzzzz-dz642-compltcontainr2
97 uuid: zzzzz-xvhdp-9zacv3o1xw6sxz5
98 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
102 created_at: 2016-01-11 11:11:11.111111111 Z
103 updated_at: 2016-01-11 11:11:11.111111111 Z
104 modified_at: 2016-01-11 11:11:11.111111111 Z
105 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
106 container_image: test
109 command: ["request-another-container", "echo", "hello"]
110 container_uuid: zzzzz-dz642-requestingcntnr
116 uuid: zzzzz-xvhdp-cr4requestercnt
117 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
121 created_at: 2016-01-11 11:11:11.111111111 Z
122 updated_at: 2016-01-11 11:11:11.111111111 Z
123 modified_at: 2016-01-11 11:11:11.111111111 Z
124 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
125 container_image: test
128 command: ["echo", "hello"]
129 container_uuid: zzzzz-dz642-requestercntnr1
130 requesting_container_uuid: zzzzz-dz642-requestingcntnr
136 uuid: zzzzz-xvhdp-cr4requestercn2
137 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
141 created_at: 2016-01-11 11:11:11.111111111 Z
142 updated_at: 2016-01-11 11:11:11.111111111 Z
143 modified_at: 2016-01-11 11:11:11.111111111 Z
144 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
145 container_image: test
148 command: ["echo", "hello"]
149 requesting_container_uuid: zzzzz-dz642-requestercntnr1
154 running_anonymous_accessible:
155 uuid: zzzzz-xvhdp-runninganonaccs
156 owner_uuid: zzzzz-j7d0g-zhxawtyetzwc5f0
157 name: running anonymously accessible cr
160 created_at: 2016-01-11 11:11:11.111111111 Z
161 updated_at: 2016-01-11 11:11:11.111111111 Z
162 modified_at: 2016-01-11 11:11:11.111111111 Z
163 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
164 container_image: test
167 command: ["echo", "hello"]
168 container_uuid: zzzzz-dz642-runningcontain2
174 uuid: zzzzz-xvhdp-cr4failedcontnr
175 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
176 name: cr for container exit code not 0
179 created_at: 2016-01-11 11:11:11.111111111 Z
180 updated_at: 2016-01-11 11:11:11.111111111 Z
181 modified_at: 2016-01-11 11:11:11.111111111 Z
182 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
183 container_image: test
186 command: ["echo", "hello"]
187 container_uuid: zzzzz-dz642-failedcntnr
193 uuid: zzzzz-xvhdp-cr4uncommittedc
194 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
196 created_at: 2016-01-11 11:11:11.111111111 Z
197 updated_at: 2016-01-11 11:11:11.111111111 Z
198 modified_at: 2016-01-11 11:11:11.111111111 Z
199 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
200 command: ["arvados-cwl-runner", "--local", "--api=containers",
201 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
202 output_path: "/var/spool/cwl"
203 cwd: "/var/spool/cwl"
206 container_image: arvados/jobs
208 "/var/lib/cwl/workflow.json": {
211 "cwlVersion": "v1.0",
212 "class": "CommandLineTool",
213 "baseCommand": ["echo"],
216 "doc": "a longer documentation string for this parameter (optional)",
219 "label": "a short label for this parameter (optional)",
220 "inputBinding": {"position": 1}
223 "type": ["null", "boolean"],
224 "id": "ex_boolean_opt",
225 "inputBinding": {"position": 1}
228 "doc": "directory selection should present the workbench collection picker",
231 "inputBinding": {"position": 1}
236 "inputBinding": {"position": 1}
239 "doc": "file selection should present the workbench file picker",
242 "inputBinding": {"position": 1}
247 "inputBinding": {"position": 1}
252 "inputBinding": {"position": 1}
255 "type": ["null", "int"],
257 "inputBinding": {"position": 1}
262 "inputBinding": {"position": 1}
267 "inputBinding": {"position": 1}
270 "type": ["null", "string"],
271 "id": "ex_string_opt",
272 "inputBinding": {"position": 1}
277 "symbols": ["a", "b", "c"]
280 "inputBinding": {"position": 1}
285 "symbols": ["a", "b", "c"]
288 "inputBinding": {"position": 1}
294 "/var/lib/cwl/cwl.input.json": {
300 "path": "/var/spool/cwl/cwl.output.json"
303 "kind": "collection",
312 uncommitted_ready_to_run:
313 uuid: zzzzz-xvhdp-cr4uncommittedd
314 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
315 name: uncommitted_ready_to_run
316 created_at: 2016-01-11 11:11:11.111111111 Z
317 updated_at: 2016-01-11 11:11:11.111111111 Z
318 modified_at: 2016-01-11 11:11:11.111111111 Z
319 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
320 command: ["arvados-cwl-runner", "--local", "--api=containers",
321 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
322 output_path: "/var/spool/cwl"
323 cwd: "/var/spool/cwl"
326 container_image: arvados/jobs
328 "/var/lib/cwl/workflow.json": {
331 "cwlVersion": "v1.0",
332 "class": "CommandLineTool",
333 "baseCommand": ["echo"],
336 "doc": "a longer documentation string for this parameter (optional)",
339 "label": "a short label for this parameter (optional)",
340 "inputBinding": {"position": 1}
343 "type": ["null", "boolean"],
344 "id": "ex_boolean_opt",
345 "inputBinding": {"position": 1}
348 "doc": "directory selection should present the workbench collection picker",
351 "inputBinding": {"position": 1}
356 "inputBinding": {"position": 1}
359 "doc": "file selection should present the workbench file picker",
362 "inputBinding": {"position": 1}
367 "inputBinding": {"position": 1}
372 "inputBinding": {"position": 1}
375 "type": ["null", "int"],
377 "inputBinding": {"position": 1}
382 "inputBinding": {"position": 1}
387 "inputBinding": {"position": 1}
390 "type": ["null", "string"],
391 "id": "ex_string_opt",
392 "inputBinding": {"position": 1}
397 "symbols": ["a", "b", "c"]
400 "inputBinding": {"position": 1}
405 "symbols": ["a", "b", "c"]
408 "inputBinding": {"position": 1}
414 "/var/lib/cwl/cwl.input.json": {
417 "ex_string_opt": null,
420 "ex_boolean_opt": true,
422 "class": "Directory",
423 "location": "keep:1f4b0bc7583c2a7f9102c395f4ffc5e3+45",
424 "arv:collection": "zzzzz-4zz18-znfnqtbbv4spc3w"
429 "location": "keep:1f4b0bc7583c2a7f9102c395f4ffc5e3+45/foo",
430 "arv:collection": "zzzzz-4zz18-znfnqtbbv4spc3w/foo"
441 "path": "/var/spool/cwl/cwl.output.json"
444 "kind": "collection",
453 uncommitted-with-directory-input:
454 uuid: zzzzz-xvhdp-cr4uncommitted2
455 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
456 name: uncommitted with directory input
457 created_at: 2016-01-11 11:11:11.111111111 Z
458 updated_at: 2016-01-11 11:11:11.111111111 Z
459 modified_at: 2016-01-11 11:11:11.111111111 Z
460 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
461 command: ["arvados-cwl-runner", "--local", "--api=containers",
462 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
463 output_path: "/var/spool/cwl"
464 cwd: "/var/spool/cwl"
467 container_image: fa3c1a9cb6783f85f2ecda037e07b8c3+167
469 "/var/lib/cwl/workflow.json": {
472 "cwlVersion": "v1.0",
473 "class": "CommandLineTool",
474 "baseCommand": ["echo"],
478 "id": "directory_type",
479 "inputBinding": {"position": 1}
485 "/var/lib/cwl/cwl.input.json": {
491 "path": "/var/spool/cwl/cwl.output.json"
494 "kind": "collection",
503 uncommitted-with-file-input:
504 uuid: zzzzz-xvhdp-cr4uncommittedf
505 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
506 name: uncommitted with directory input
507 created_at: 2016-01-11 11:11:11.111111111 Z
508 updated_at: 2016-01-11 11:11:11.111111111 Z
509 modified_at: 2016-01-11 11:11:11.111111111 Z
510 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
511 command: ["arvados-cwl-runner", "--local", "--api=containers",
512 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
513 output_path: "/var/spool/cwl"
514 cwd: "/var/spool/cwl"
517 container_image: fa3c1a9cb6783f85f2ecda037e07b8c3+167
519 "/var/lib/cwl/workflow.json": {
522 "cwlVersion": "v1.0",
523 "class": "CommandLineTool",
524 "baseCommand": ["echo"],
529 "inputBinding": {"position": 1}
535 "/var/lib/cwl/cwl.input.json": {
541 "path": "/var/spool/cwl/cwl.output.json"
544 "kind": "collection",
553 uncommitted-with-required-and-optional-inputs:
554 uuid: zzzzz-xvhdp-cr4uncommitted3
555 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
556 name: uncommitted with required and optional inputs
557 created_at: 2016-01-11 11:11:11.111111111 Z
558 updated_at: 2016-01-11 11:11:11.111111111 Z
559 modified_at: 2016-01-11 11:11:11.111111111 Z
560 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
561 command: ["arvados-cwl-runner", "--local", "--api=containers",
562 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
563 output_path: "/var/spool/cwl"
564 cwd: "/var/spool/cwl"
567 container_image: fa3c1a9cb6783f85f2ecda037e07b8c3+167
569 "/var/lib/cwl/workflow.json": {
572 "cwlVersion": "v1.0",
573 "class": "CommandLineTool",
574 "baseCommand": ["echo"],
578 "id": "int_required",
579 "inputBinding": {"position": 1}
582 "type": ["null", "int"],
583 "id": "int_optional",
584 "inputBinding": {"position": 1}
590 "/var/lib/cwl/cwl.input.json": {
596 "path": "/var/spool/cwl/cwl.output.json"
599 "kind": "collection",
608 # Test Helper trims the rest of the file
610 # Do not add your fixtures below this line as the rest of this file will be trimmed by test_helper
612 # container requests in project_with_2_pipelines_and_60_crs
613 <% for i in 1..60 do %>
615 uuid: zzzzz-xvhdp-oneof60crs<%= i.to_s.rjust(5, '0') %>
616 created_at: <%= ((i+5)/5).hour.ago.to_s(:db) %>
617 owner_uuid: zzzzz-j7d0g-nnncrspipelines
618 name: cr-<%= i.to_s %>
620 command: ["echo", "hello"]
623 # Do not add your fixtures below this line as the rest of this file will be trimmed by test_helper