build/run-library.sh

   1 #!/bin/bash -xe
   2 # Copyright (C) The Arvados Authors. All rights reserved.
   3 #
   4 # SPDX-License-Identifier: AGPL-3.0
   5
   6 # A library of functions shared by the various scripts in this directory.
   7
   8 # This is the timestamp about when we merged changed to include licenses
   9 # with Arvados packages.  We use it as a heuristic to add revisions for
  10 # older packages.
  11 LICENSE_PACKAGE_TS=20151208015500
  12
  13 if [[ -z "$ARVADOS_BUILDING_VERSION" ]]; then
  14     RAILS_PACKAGE_ITERATION=1
  15 else
  16     RAILS_PACKAGE_ITERATION="$ARVADOS_BUILDING_ITERATION"
  17 fi
  18
  19 debug_echo () {
  20     echo "$@" >"$STDOUT_IF_DEBUG"
  21 }
  22
  23 find_python_program() {
  24     prog="$1"
  25     shift
  26     for prog in "$@"; do
  27         if "$prog" --version >/dev/null 2>&1; then
  28             echo "$prog"
  29             return 0
  30         fi
  31     done
  32     cat >&2 <<EOF
  33 $helpmessage
  34
  35 Error: $prog (from Python setuptools module) not found
  36
  37 EOF
  38     exit 1
  39 }
  40
  41 format_last_commit_here() {
  42     local format="$1"; shift
  43     local dir="${1:-.}"; shift
  44     TZ=UTC git log -n1 --first-parent "--format=format:$format" "$dir"
  45 }
  46
  47 version_from_git() {
  48     # Output the version being built, or if we're building a
  49     # dev/prerelease, output a version number based on the git log for
  50     # the given $subdir.
  51     local subdir="$1"; shift
  52     if [[ -n "$ARVADOS_BUILDING_VERSION" ]]; then
  53         echo "$ARVADOS_BUILDING_VERSION"
  54         return
  55     fi
  56
  57     local git_ts git_hash
  58     declare $(format_last_commit_here "git_ts=%ct git_hash=%h" "$subdir")
  59     ARVADOS_BUILDING_VERSION="$($WORKSPACE/build/version-at-commit.sh $git_hash)"
  60     echo "$ARVADOS_BUILDING_VERSION"
  61 }
  62
  63 nohash_version_from_git() {
  64     if [[ -n "$ARVADOS_BUILDING_VERSION" ]]; then
  65         echo "$ARVADOS_BUILDING_VERSION"
  66         return
  67     fi
  68     version_from_git | cut -d. -f1-4
  69 }
  70
  71 timestamp_from_git() {
  72     local subdir="$1"; shift
  73     format_last_commit_here "%ct" "$subdir"
  74 }
  75
  76 calculate_python_sdk_cwl_package_versions() {
  77   python_sdk_ts=$(cd sdk/python && timestamp_from_git)
  78   cwl_runner_ts=$(cd sdk/cwl && timestamp_from_git)
  79
  80   python_sdk_version=$(cd sdk/python && nohash_version_from_git)
  81   cwl_runner_version=$(cd sdk/cwl && nohash_version_from_git)
  82
  83   if [[ $python_sdk_ts -gt $cwl_runner_ts ]]; then
  84     cwl_runner_version=$python_sdk_version
  85   fi
  86 }
  87
  88 handle_python_package () {
  89   # This function assumes the current working directory is the python package directory
  90   if [ -n "$(find dist -name "*-$(nohash_version_from_git).tar.gz" -print -quit)" ]; then
  91     # This package doesn't need rebuilding.
  92     return
  93   fi
  94   # Make sure only to use sdist - that's the only format pip can deal with (sigh)
  95   python setup.py $DASHQ_UNLESS_DEBUG sdist
  96 }
  97
  98 handle_ruby_gem() {
  99     local gem_name="$1"; shift
 100     local gem_version="$(nohash_version_from_git)"
 101     local gem_src_dir="$(pwd)"
 102
 103     if [[ -n "$ONLY_BUILD" ]] && [[ "$gem_name" != "$ONLY_BUILD" ]] ; then
 104         return 0
 105     fi
 106
 107     if ! [[ -e "${gem_name}-${gem_version}.gem" ]]; then
 108         find -maxdepth 1 -name "${gem_name}-*.gem" -delete
 109
 110         # -q appears to be broken in gem version 2.2.2
 111         $GEM build "$gem_name.gemspec" $DASHQ_UNLESS_DEBUG >"$STDOUT_IF_DEBUG" 2>"$STDERR_IF_DEBUG"
 112     fi
 113 }
 114
 115 calculate_go_package_version() {
 116   # $__returnvar has the nameref attribute set, which means it is a reference
 117   # to another variable that is passed in as the first argument to this function.
 118   # see https://www.gnu.org/software/bash/manual/html_node/Shell-Parameters.html
 119   local -n __returnvar="$1"; shift
 120   local oldpwd="$PWD"
 121
 122   cd "$WORKSPACE"
 123   go mod download
 124
 125   # Update the version number and build a new package if the vendor
 126   # bundle has changed, or the command imports anything from the
 127   # Arvados SDK and the SDK has changed.
 128   declare -a checkdirs=(go.mod go.sum)
 129   while [ -n "$1" ]; do
 130       checkdirs+=("$1")
 131       shift
 132   done
 133   if grep -qr git.arvados.org/arvados .; then
 134       checkdirs+=(sdk/go lib)
 135   fi
 136   local timestamp=0
 137   for dir in ${checkdirs[@]}; do
 138       cd "$WORKSPACE"
 139       ts="$(timestamp_from_git "$dir")"
 140       if [[ "$ts" -gt "$timestamp" ]]; then
 141           version=$(version_from_git "$dir")
 142           timestamp="$ts"
 143       fi
 144   done
 145   cd "$oldpwd"
 146   __returnvar="$version"
 147 }
 148
 149 # Usage: package_go_binary services/foo arvados-foo "Compute foo to arbitrary precision" [apache-2.0.txt]
 150 package_go_binary() {
 151     local src_path="$1"; shift
 152     local prog="$1"; shift
 153     local description="$1"; shift
 154     local license_file="${1:-agpl-3.0.txt}"; shift
 155
 156     if [[ -n "$ONLY_BUILD" ]] && [[ "$prog" != "$ONLY_BUILD" ]]; then
 157       # arvados-workbench depends on arvados-server at build time, so even when
 158       # only arvados-workbench is being built, we need to build arvados-server too
 159       if [[ "$prog" != "arvados-server" ]] || [[ "$ONLY_BUILD" != "arvados-workbench" ]]; then
 160         return 0
 161       fi
 162     fi
 163
 164     debug_echo "package_go_binary $src_path as $prog"
 165
 166     local basename="${src_path##*/}"
 167     calculate_go_package_version go_package_version $src_path
 168
 169     cd $WORKSPACE/packages/$TARGET
 170     test_package_presence $prog $go_package_version go
 171
 172     if [[ "$?" != "0" ]]; then
 173       return 1
 174     fi
 175
 176     go get -ldflags "-X git.arvados.org/arvados.git/lib/cmd.version=${go_package_version} -X main.version=${go_package_version}" "git.arvados.org/arvados.git/$src_path"
 177
 178     local -a switches=()
 179     systemd_unit="$WORKSPACE/${src_path}/${prog}.service"
 180     if [[ -e "${systemd_unit}" ]]; then
 181         switches+=(
 182             --after-install "${WORKSPACE}/build/go-python-package-scripts/postinst"
 183             --before-remove "${WORKSPACE}/build/go-python-package-scripts/prerm"
 184             "${systemd_unit}=/lib/systemd/system/${prog}.service")
 185     fi
 186     switches+=("$WORKSPACE/${license_file}=/usr/share/doc/$prog/${license_file}")
 187
 188     fpm_build "${WORKSPACE}/${src_path}" "$GOPATH/bin/${basename}=/usr/bin/${prog}" "${prog}" dir "${go_package_version}" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=${description}" "${switches[@]}"
 189 }
 190
 191 # Usage: package_go_so lib/foo arvados_foo.so arvados-foo "Arvados foo library"
 192 package_go_so() {
 193     local src_path="$1"; shift
 194     local sofile="$1"; shift
 195     local pkg="$1"; shift
 196     local description="$1"; shift
 197
 198     debug_echo "package_go_so $src_path as $pkg"
 199
 200     calculate_go_package_version go_package_version $src_path
 201     cd $WORKSPACE/packages/$TARGET
 202     test_package_presence $pkg $go_package_version go || return 1
 203     cd $WORKSPACE/$src_path
 204     go build -buildmode=c-shared -o ${GOPATH}/bin/${sofile}
 205     cd $WORKSPACE/packages/$TARGET
 206     local -a fpmargs=(
 207         "--url=https://arvados.org"
 208         "--license=Apache License, Version 2.0"
 209         "--description=${description}"
 210         "$WORKSPACE/apache-2.0.txt=/usr/share/doc/$pkg/apache-2.0.txt"
 211     )
 212     if [[ -e "$WORKSPACE/$src_path/pam-configs-arvados" ]]; then
 213         fpmargs+=("$WORKSPACE/$src_path/pam-configs-arvados=/usr/share/doc/$pkg/pam-configs-arvados-go")
 214     fi
 215     if [[ -e "$WORKSPACE/$src_path/README" ]]; then
 216         fpmargs+=("$WORKSPACE/$src_path/README=/usr/share/doc/$pkg/README")
 217     fi
 218     fpm_build "${WORKSPACE}/${src_path}" "$GOPATH/bin/${sofile}=/usr/lib/${sofile}" "${pkg}" dir "${go_package_version}" "${fpmargs[@]}"
 219 }
 220
 221 default_iteration() {
 222     if [[ -n "$ARVADOS_BUILDING_VERSION" ]]; then
 223         echo "$ARVADOS_BUILDING_ITERATION"
 224         return
 225     fi
 226     local package_name="$1"; shift
 227     local package_version="$1"; shift
 228     local package_type="$1"; shift
 229     local iteration=1
 230     if [[ $package_version =~ ^0\.1\.([0-9]{14})(\.|$) ]] && \
 231            [[ ${BASH_REMATCH[1]} -le $LICENSE_PACKAGE_TS ]]; then
 232         iteration=2
 233     fi
 234     echo $iteration
 235 }
 236
 237 _build_rails_package_scripts() {
 238     local pkgname="$1"; shift
 239     local destdir="$1"; shift
 240     local srcdir="$RUN_BUILD_PACKAGES_PATH/rails-package-scripts"
 241     for scriptname in postinst prerm postrm; do
 242         cat "$srcdir/$pkgname.sh" "$srcdir/step2.sh" "$srcdir/$scriptname.sh" \
 243             >"$destdir/$scriptname" || return $?
 244     done
 245 }
 246
 247 rails_package_version() {
 248     local pkgname="$1"; shift
 249     local srcdir="$1"; shift
 250     if [[ -n "$ARVADOS_BUILDING_VERSION" ]]; then
 251         echo "$ARVADOS_BUILDING_VERSION"
 252         return
 253     fi
 254     local version="$(version_from_git)"
 255     if [ $pkgname = "arvados-api-server" -o $pkgname = "arvados-workbench" ] ; then
 256         calculate_go_package_version version cmd/arvados-server "$srcdir"
 257     fi
 258     echo $version
 259 }
 260
 261 test_rails_package_presence() {
 262   local pkgname="$1"; shift
 263   local srcdir="$1"; shift
 264
 265   if [[ -n "$ONLY_BUILD" ]] && [[ "$pkgname" != "$ONLY_BUILD" ]] ; then
 266     return 1
 267   fi
 268
 269   tmppwd=`pwd`
 270
 271   cd $srcdir
 272
 273   local version="$(rails_package_version "$pkgname" "$srcdir")"
 274
 275   cd $tmppwd
 276
 277   test_package_presence $pkgname $version rails "$RAILS_PACKAGE_ITERATION"
 278 }
 279
 280 get_complete_package_name() {
 281   # if the errexit flag is set, unset it until this function returns
 282   # otherwise, the shift calls below will abort the program if optional arguments are not supplied
 283   if [ -o errexit ]; then
 284     set +e
 285     trap 'set -e' RETURN
 286   fi
 287   # $__returnvar has the nameref attribute set, which means it is a reference
 288   # to another variable that is passed in as the first argument to this function.
 289   # see https://www.gnu.org/software/bash/manual/html_node/Shell-Parameters.html
 290   local -n __returnvar="$1"; shift
 291   local pkgname="$1"; shift
 292   local version="$1"; shift
 293   local pkgtype="$1"; shift
 294   local iteration="$1"; shift
 295   local arch="$1"; shift
 296   if [[ "$iteration" == "" ]]; then
 297       iteration="$(default_iteration "$pkgname" "$version" "$pkgtype")"
 298   fi
 299
 300   if [[ "$arch" == "" ]]; then
 301     rpm_architecture="x86_64"
 302     deb_architecture="amd64"
 303
 304     if [[ "$pkgtype" =~ ^(src)$ ]]; then
 305       rpm_architecture="noarch"
 306       deb_architecture="all"
 307     fi
 308
 309     # These python packages have binary components
 310     if [[ "$pkgname" =~ (ruamel|ciso|pycrypto|pyyaml) ]]; then
 311       rpm_architecture="x86_64"
 312       deb_architecture="amd64"
 313     fi
 314   else
 315     rpm_architecture=$arch
 316     deb_architecture=$arch
 317   fi
 318
 319   local complete_pkgname="${pkgname}_$version${iteration:+-$iteration}_$deb_architecture.deb"
 320   if [[ "$FORMAT" == "rpm" ]]; then
 321       # rpm packages get iteration 1 if we don't supply one
 322       iteration=${iteration:-1}
 323       complete_pkgname="$pkgname-$version-${iteration}.$rpm_architecture.rpm"
 324   fi
 325   __returnvar=${complete_pkgname}
 326 }
 327
 328 # Test if the package already exists, if not return 0, if it does return 1
 329 test_package_presence() {
 330     local pkgname="$1"; shift
 331     local version="$1"; shift
 332     local pkgtype="$1"; shift
 333     local iteration="$1"; shift
 334     local arch="$1"; shift
 335     if [[ -n "$ONLY_BUILD" ]] && [[ "$pkgname" != "$ONLY_BUILD" ]] ; then
 336       # arvados-workbench depends on arvados-server at build time, so even when
 337       # only arvados-workbench is being built, we need to build arvados-server too
 338       if [[ "$pkgname" != "arvados-server" ]] || [[ "$ONLY_BUILD" != "arvados-workbench" ]]; then
 339         return 1
 340       fi
 341     fi
 342
 343     local full_pkgname
 344     get_complete_package_name full_pkgname $pkgname $version $pkgtype $iteration $arch
 345
 346     # See if we can skip building the package, only if it already exists in the
 347     # processed/ directory. If so, move it back to the packages directory to make
 348     # sure it gets picked up by the test and/or upload steps.
 349     # Get the list of packages from the repos
 350
 351     if [[ "$FORCE_BUILD" == "1" ]]; then
 352       echo "Package $full_pkgname build forced with --force-build, building"
 353     elif [[ "$FORMAT" == "deb" ]]; then
 354       declare -A dd
 355       dd[debian9]=stretch
 356       dd[debian10]=buster
 357       dd[ubuntu1604]=xenial
 358       dd[ubuntu1804]=bionic
 359       D=${dd[$TARGET]}
 360       if [ ${pkgname:0:3} = "lib" ]; then
 361         repo_subdir=${pkgname:0:4}
 362       else
 363         repo_subdir=${pkgname:0:1}
 364       fi
 365
 366       repo_pkg_list=$(curl -s -o - http://apt.arvados.org/pool/${D}-dev/main/${repo_subdir}/${pkgname}/)
 367       echo "${repo_pkg_list}" |grep -q ${full_pkgname}
 368       if [ $? -eq 0 ] ; then
 369         echo "Package $full_pkgname exists upstream, not rebuilding, downloading instead!"
 370         curl -s -o "$WORKSPACE/packages/$TARGET/${full_pkgname}" http://apt.arvados.org/pool/${D}-dev/main/${repo_subdir}/${pkgname}/${full_pkgname}
 371         return 1
 372       elif test -f "$WORKSPACE/packages/$TARGET/processed/${full_pkgname}" ; then
 373         echo "Package $full_pkgname exists, not rebuilding!"
 374         return 1
 375       else
 376         echo "Package $full_pkgname not found, building"
 377         return 0
 378       fi
 379     else
 380       centos_repo="http://rpm.arvados.org/CentOS/7/dev/x86_64/"
 381
 382       repo_pkg_list=$(curl -s -o - ${centos_repo})
 383       echo ${repo_pkg_list} |grep -q ${full_pkgname}
 384       if [ $? -eq 0 ]; then
 385         echo "Package $full_pkgname exists upstream, not rebuilding, downloading instead!"
 386         curl -s -o "$WORKSPACE/packages/$TARGET/${full_pkgname}" ${centos_repo}${full_pkgname}
 387         return 1
 388       elif test -f "$WORKSPACE/packages/$TARGET/processed/${full_pkgname}" ; then
 389         echo "Package $full_pkgname exists, not rebuilding!"
 390         return 1
 391       else
 392         echo "Package $full_pkgname not found, building"
 393         return 0
 394       fi
 395     fi
 396 }
 397
 398 handle_rails_package() {
 399     local pkgname="$1"; shift
 400
 401     if [[ -n "$ONLY_BUILD" ]] && [[ "$pkgname" != "$ONLY_BUILD" ]] ; then
 402         return 0
 403     fi
 404     local srcdir="$1"; shift
 405     cd "$srcdir"
 406     local license_path="$1"; shift
 407     local version="$(rails_package_version "$pkgname" "$srcdir")"
 408     echo "$version" >package-build.version
 409     local scripts_dir="$(mktemp --tmpdir -d "$pkgname-XXXXXXXX.scripts")" && \
 410     (
 411         set -e
 412         _build_rails_package_scripts "$pkgname" "$scripts_dir"
 413         cd "$srcdir"
 414         mkdir -p tmp
 415         git rev-parse HEAD >git-commit.version
 416         bundle package --all
 417     )
 418     if [[ 0 != "$?" ]] || ! cd "$WORKSPACE/packages/$TARGET"; then
 419         echo "ERROR: $pkgname package prep failed" >&2
 420         rm -rf "$scripts_dir"
 421         EXITCODE=1
 422         return 1
 423     fi
 424     local railsdir="/var/www/${pkgname%-server}/current"
 425     local -a pos_args=("$srcdir/=$railsdir" "$pkgname" dir "$version")
 426     local license_arg="$license_path=$railsdir/$(basename "$license_path")"
 427     local -a switches=(--after-install "$scripts_dir/postinst"
 428                        --before-remove "$scripts_dir/prerm"
 429                        --after-remove "$scripts_dir/postrm")
 430     if [[ -z "$ARVADOS_BUILDING_VERSION" ]]; then
 431         switches+=(--iteration $RAILS_PACKAGE_ITERATION)
 432     fi
 433     # For some reason fpm excludes need to not start with /.
 434     local exclude_root="${railsdir#/}"
 435     # .git and packages are for the SSO server, which is built from its
 436     # repository root.
 437     local -a exclude_list=(.git packages tmp log coverage Capfile\* \
 438                            config/deploy\* config/application.yml)
 439     # for arvados-workbench, we need to have the (dummy) config/database.yml in the package
 440     if  [[ "$pkgname" != "arvados-workbench" ]]; then
 441       exclude_list+=('config/database.yml')
 442     fi
 443     for exclude in ${exclude_list[@]}; do
 444         switches+=(-x "$exclude_root/$exclude")
 445     done
 446     fpm_build "${srcdir}" "${pos_args[@]}" "${switches[@]}" \
 447               -x "$exclude_root/vendor/cache-*" \
 448               -x "$exclude_root/vendor/bundle" "$@" "$license_arg"
 449     rm -rf "$scripts_dir"
 450 }
 451
 452 # Build python packages with a virtualenv built-in
 453 fpm_build_virtualenv () {
 454   PKG=$1
 455   shift
 456   PKG_DIR=$1
 457   shift
 458   PACKAGE_TYPE=${1:-python}
 459   shift
 460
 461   # Set up
 462   STDOUT_IF_DEBUG=/dev/null
 463   STDERR_IF_DEBUG=/dev/null
 464   DASHQ_UNLESS_DEBUG=-q
 465   if [[ "$DEBUG" != "0" ]]; then
 466       STDOUT_IF_DEBUG=/dev/stdout
 467       STDERR_IF_DEBUG=/dev/stderr
 468       DASHQ_UNLESS_DEBUG=
 469   fi
 470   if [[ "$ARVADOS_BUILDING_ITERATION" == "" ]]; then
 471     ARVADOS_BUILDING_ITERATION=1
 472   fi
 473
 474   local python=""
 475   case "$PACKAGE_TYPE" in
 476     python3)
 477         python=python3
 478         if [[ "$FORMAT" != "rpm" ]]; then
 479           pip=pip3
 480         else
 481           # In CentOS, we use a different mechanism to get the right version of pip
 482           pip=pip
 483         fi
 484         PACKAGE_PREFIX=$PYTHON3_PKG_PREFIX
 485         ;;
 486   esac
 487
 488   if [[ "$PKG" != "arvados-docker-cleaner" ]]; then
 489     PYTHON_PKG=$PACKAGE_PREFIX-$PKG
 490   else
 491     # Exception to our package naming convention
 492     PYTHON_PKG=$PKG
 493   fi
 494
 495   # arvados-python-client sdist should always be built, to be available
 496   # for other dependent packages.
 497   if [[ -n "$ONLY_BUILD" ]] && [[ "arvados-python-client" != "$PKG" ]] && [[ "$PYTHON_PKG" != "$ONLY_BUILD" ]] && [[ "$PKG" != "$ONLY_BUILD" ]]; then
 498     return 0
 499   fi
 500
 501   cd $WORKSPACE/$PKG_DIR
 502
 503   rm -rf dist/*
 504
 505   # Get the latest setuptools
 506   if ! $pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'; then
 507     echo "Error, unable to upgrade setuptools with"
 508     echo "  $pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'"
 509     exit 1
 510   fi
 511   # filter a useless warning (when building the cwltest package) from the stderr output
 512   if ! $python setup.py $DASHQ_UNLESS_DEBUG sdist 2> >(grep -v 'warning: no previously-included files matching'); then
 513     echo "Error, unable to run $python setup.py sdist for $PKG"
 514     exit 1
 515   fi
 516
 517   PACKAGE_PATH=`(cd dist; ls *tar.gz)`
 518
 519   if [[ "arvados-python-client" == "$PKG" ]]; then
 520     PYSDK_PATH=`pwd`/dist/
 521   fi
 522
 523   if [[ -n "$ONLY_BUILD" ]] && [[ "$PYTHON_PKG" != "$ONLY_BUILD" ]] && [[ "$PKG" != "$ONLY_BUILD" ]]; then
 524     return 0
 525   fi
 526
 527   # Determine the package version from the generated sdist archive
 528   if [[ -n "$ARVADOS_BUILDING_VERSION" ]] ; then
 529       UNFILTERED_PYTHON_VERSION=$(echo -n $ARVADOS_BUILDING_VERSION)
 530       PYTHON_VERSION=$(echo -n $ARVADOS_BUILDING_VERSION | sed s/~rc/rc/g)
 531   else
 532       UNFILTERED_PYTHON_VERSION=$(awk '($1 == "Version:"){print $2}' *.egg-info/PKG-INFO)
 533       PYTHON_VERSION=$(awk '($1 == "Version:"){print $2}' *.egg-info/PKG-INFO)
 534   fi
 535
 536   # See if we actually need to build this package; does it exist already?
 537   # We can't do this earlier than here, because we need PYTHON_VERSION...
 538   # This isn't so bad; the sdist call above is pretty quick compared to
 539   # the invocation of virtualenv and fpm, below.
 540   if ! test_package_presence "$PYTHON_PKG" $UNFILTERED_PYTHON_VERSION $PACKAGE_TYPE $ARVADOS_BUILDING_ITERATION; then
 541     return 0
 542   fi
 543
 544   echo "Building $FORMAT package for $PKG from $PKG_DIR"
 545
 546   # Package the sdist in a virtualenv
 547   echo "Creating virtualenv..."
 548
 549   cd dist
 550
 551   rm -rf build
 552   rm -f $PYTHON_PKG*deb
 553   echo "virtualenv version: `virtualenv --version`"
 554   virtualenv_command="virtualenv --python `which $python` $DASHQ_UNLESS_DEBUG build/usr/share/$python/dist/$PYTHON_PKG"
 555
 556   if ! $virtualenv_command; then
 557     echo "Error, unable to run"
 558     echo "  $virtualenv_command"
 559     exit 1
 560   fi
 561
 562   if ! build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U pip; then
 563     echo "Error, unable to upgrade pip with"
 564     echo "  build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U pip"
 565     exit 1
 566   fi
 567   echo "pip version:        `build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip --version`"
 568
 569   if ! build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'; then
 570     echo "Error, unable to upgrade setuptools with"
 571     echo "  build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U 'setuptools<45'"
 572     exit 1
 573   fi
 574   echo "setuptools version: `build/usr/share/$python/dist/$PYTHON_PKG/bin/$python -c 'import setuptools; print(setuptools.__version__)'`"
 575
 576   if ! build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U wheel; then
 577     echo "Error, unable to upgrade wheel with"
 578     echo "  build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -U wheel"
 579     exit 1
 580   fi
 581   echo "wheel version:      `build/usr/share/$python/dist/$PYTHON_PKG/bin/wheel version`"
 582
 583   if [[ "$TARGET" != "centos7" ]] || [[ "$PYTHON_PKG" != "python-arvados-fuse" ]]; then
 584     build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -f $PYSDK_PATH $PACKAGE_PATH
 585   else
 586     # centos7 needs these special tweaks to install python-arvados-fuse
 587     build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG docutils
 588     PYCURL_SSL_LIBRARY=nss build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -f $PYSDK_PATH $PACKAGE_PATH
 589   fi
 590
 591   if [[ "$?" != "0" ]]; then
 592     echo "Error, unable to run"
 593     echo "  build/usr/share/$python/dist/$PYTHON_PKG/bin/$pip install $DASHQ_UNLESS_DEBUG $CACHE_FLAG -f $PYSDK_PATH $PACKAGE_PATH"
 594     exit 1
 595   fi
 596
 597   cd build/usr/share/$python/dist/$PYTHON_PKG/
 598
 599   # Replace the shebang lines in all python scripts, and handle the activate
 600   # scripts too. This is a functional replacement of the 237 line
 601   # virtualenv_tools.py script that doesn't work in python3 without serious
 602   # patching, minus the parts we don't need (modifying pyc files, etc).
 603   for binfile in `ls bin/`; do
 604     if ! file --mime bin/$binfile |grep -q binary; then
 605       # Not a binary file
 606       if [[ "$binfile" =~ ^activate(.csh|.fish|)$ ]]; then
 607         # these 'activate' scripts need special treatment
 608         sed -i "s/VIRTUAL_ENV=\".*\"/VIRTUAL_ENV=\"\/usr\/share\/$python\/dist\/$PYTHON_PKG\"/" bin/$binfile
 609         sed -i "s/VIRTUAL_ENV \".*\"/VIRTUAL_ENV \"\/usr\/share\/$python\/dist\/$PYTHON_PKG\"/" bin/$binfile
 610       else
 611         if grep -q -E '^#!.*/bin/python\d?' bin/$binfile; then
 612           # Replace shebang line
 613           sed -i "1 s/^.*$/#!\/usr\/share\/$python\/dist\/$PYTHON_PKG\/bin\/python/" bin/$binfile
 614         fi
 615       fi
 616     fi
 617   done
 618
 619   cd - >$STDOUT_IF_DEBUG
 620
 621   find build -iname '*.pyc' -exec rm {} \;
 622   find build -iname '*.pyo' -exec rm {} \;
 623
 624   # Finally, generate the package
 625   echo "Creating package..."
 626
 627   declare -a COMMAND_ARR=("fpm" "-s" "dir" "-t" "$FORMAT")
 628
 629   if [[ "$MAINTAINER" != "" ]]; then
 630     COMMAND_ARR+=('--maintainer' "$MAINTAINER")
 631   fi
 632
 633   if [[ "$VENDOR" != "" ]]; then
 634     COMMAND_ARR+=('--vendor' "$VENDOR")
 635   fi
 636
 637   COMMAND_ARR+=('--url' 'https://arvados.org')
 638
 639   # Get description
 640   DESCRIPTION=`grep '\sdescription' $WORKSPACE/$PKG_DIR/setup.py|cut -f2 -d=|sed -e "s/[',\\"]//g"`
 641   COMMAND_ARR+=('--description' "$DESCRIPTION")
 642
 643   # Get license string
 644   LICENSE_STRING=`grep license $WORKSPACE/$PKG_DIR/setup.py|cut -f2 -d=|sed -e "s/[',\\"]//g"`
 645   COMMAND_ARR+=('--license' "$LICENSE_STRING")
 646
 647   if [[ "$DEBUG" != "0" ]]; then
 648     COMMAND_ARR+=('--verbose' '--log' 'info')
 649   fi
 650
 651   COMMAND_ARR+=('-v' $(echo "$PYTHON_VERSION" | sed s/rc/~rc/g))
 652   COMMAND_ARR+=('--iteration' "$ARVADOS_BUILDING_ITERATION")
 653   COMMAND_ARR+=('-n' "$PYTHON_PKG")
 654   COMMAND_ARR+=('-C' "build")
 655
 656   systemd_unit="$WORKSPACE/$PKG_DIR/$PKG.service"
 657   if [[ -e "${systemd_unit}" ]]; then
 658     COMMAND_ARR+=('--after-install' "${WORKSPACE}/build/go-python-package-scripts/postinst")
 659     COMMAND_ARR+=('--before-remove' "${WORKSPACE}/build/go-python-package-scripts/prerm")
 660   fi
 661
 662   COMMAND_ARR+=('--depends' "$PYTHON3_PACKAGE")
 663
 664   # avoid warning
 665   COMMAND_ARR+=('--deb-no-default-config-files')
 666
 667   # Append --depends X and other arguments specified by fpm-info.sh in
 668   # the package source dir. These are added last so they can override
 669   # the arguments added by this script.
 670   declare -a fpm_args=()
 671   declare -a fpm_depends=()
 672
 673   fpminfo="$WORKSPACE/$PKG_DIR/fpm-info.sh"
 674   if [[ -e "$fpminfo" ]]; then
 675     echo "Loading fpm overrides from $fpminfo"
 676     if ! source "$fpminfo"; then
 677       echo "Error, unable to source $WORKSPACE/$PKG_DIR/fpm-info.sh for $PKG"
 678       exit 1
 679     fi
 680   fi
 681
 682   for i in "${fpm_depends[@]}"; do
 683     COMMAND_ARR+=('--depends' "$i")
 684   done
 685
 686   # make sure the systemd service file ends up in the right place
 687   # used by arvados-docker-cleaner
 688   if [[ -e "${systemd_unit}" ]]; then
 689     COMMAND_ARR+=("usr/share/$python/dist/$PKG/share/doc/$PKG/$PKG.service=/lib/systemd/system/$PKG.service")
 690   fi
 691
 692   COMMAND_ARR+=("${fpm_args[@]}")
 693
 694   # Make sure to install all our package binaries in /usr/bin.
 695   # We have to walk $WORKSPACE/$PKG_DIR/bin rather than
 696   # $WORKSPACE/build/usr/share/$python/dist/$PYTHON_PKG/bin/ to get the list
 697   # because the latter also includes all the python binaries for the virtualenv.
 698   # We have to take the copies of our binaries from the latter directory, though,
 699   # because those are the ones we rewrote the shebang line of, above.
 700   if [[ -e "$WORKSPACE/$PKG_DIR/bin" ]]; then
 701     for binary in `ls $WORKSPACE/$PKG_DIR/bin`; do
 702       COMMAND_ARR+=("usr/share/$python/dist/$PYTHON_PKG/bin/$binary=/usr/bin/")
 703     done
 704   fi
 705
 706   # the python-arvados-cwl-runner package comes with cwltool, expose that version
 707   if [[ -e "$WORKSPACE/$PKG_DIR/dist/build/usr/share/python2.7/dist/python-arvados-cwl-runner/bin/cwltool" ]]; then
 708     COMMAND_ARR+=("usr/share/python2.7/dist/python-arvados-cwl-runner/bin/cwltool=/usr/bin/")
 709   fi
 710
 711   COMMAND_ARR+=(".")
 712
 713   debug_echo -e "\n${COMMAND_ARR[@]}\n"
 714
 715   FPM_RESULTS=$("${COMMAND_ARR[@]}")
 716   FPM_EXIT_CODE=$?
 717
 718   # if something went wrong and debug is off, print out the fpm command that errored
 719   if ! fpm_verify $FPM_EXIT_CODE $FPM_RESULTS && [[ "$STDOUT_IF_DEBUG" == "/dev/null" ]]; then
 720     echo "fpm returned an error executing the command:"
 721     echo
 722     echo -e "\n${COMMAND_ARR[@]}\n"
 723   else
 724     echo `ls *$FORMAT`
 725     mv $WORKSPACE/$PKG_DIR/dist/*$FORMAT $WORKSPACE/packages/$TARGET/
 726   fi
 727   echo
 728 }
 729
 730 # Build packages for everything
 731 fpm_build () {
 732   # Source dir where fpm-info.sh (if any) will be found.
 733   SRC_DIR=$1
 734   shift
 735   # The package source.  Depending on the source type, this can be a
 736   # path, or the name of the package in an upstream repository (e.g.,
 737   # pip).
 738   PACKAGE=$1
 739   shift
 740   # The name of the package to build.
 741   PACKAGE_NAME=$1
 742   shift
 743   # The type of source package.  Passed to fpm -s.  Default "dir".
 744   PACKAGE_TYPE=${1:-dir}
 745   shift
 746   # Optional: the package version number.  Passed to fpm -v.
 747   VERSION=$1
 748   shift
 749
 750   if [[ -n "$ONLY_BUILD" ]] && [[ "$PACKAGE_NAME" != "$ONLY_BUILD" ]] && [[ "$PACKAGE" != "$ONLY_BUILD" ]] ; then
 751     # arvados-workbench depends on arvados-server at build time, so even when
 752     # only arvados-workbench is being built, we need to build arvados-server too
 753     if [[ "$PACKAGE_NAME" != "arvados-server" ]] || [[ "$ONLY_BUILD" != "arvados-workbench" ]]; then
 754       return 0
 755     fi
 756   fi
 757
 758   local default_iteration_value="$(default_iteration "$PACKAGE" "$VERSION" "$PACKAGE_TYPE")"
 759
 760   declare -a COMMAND_ARR=("fpm" "-s" "$PACKAGE_TYPE" "-t" "$FORMAT")
 761   if [ python = "$PACKAGE_TYPE" ] && [ deb = "$FORMAT" ]; then
 762       # Dependencies are built from setup.py.  Since setup.py will never
 763       # refer to Debian package iterations, it doesn't make sense to
 764       # enforce those in the .deb dependencies.
 765       COMMAND_ARR+=(--deb-ignore-iteration-in-dependencies)
 766   fi
 767
 768   if [[ "$DEBUG" != "0" ]]; then
 769     COMMAND_ARR+=('--verbose' '--log' 'info')
 770   fi
 771
 772   if [[ -n "$PACKAGE_NAME" ]]; then
 773     COMMAND_ARR+=('-n' "$PACKAGE_NAME")
 774   fi
 775
 776   if [[ "$MAINTAINER" != "" ]]; then
 777     COMMAND_ARR+=('--maintainer' "$MAINTAINER")
 778   fi
 779
 780   if [[ "$VENDOR" != "" ]]; then
 781     COMMAND_ARR+=('--vendor' "$VENDOR")
 782   fi
 783
 784   if [[ "$VERSION" != "" ]]; then
 785     COMMAND_ARR+=('-v' "$VERSION")
 786   fi
 787   if [[ -n "$default_iteration_value" ]]; then
 788       # We can always add an --iteration here.  If another one is specified in $@,
 789       # that will take precedence, as desired.
 790       COMMAND_ARR+=(--iteration "$default_iteration_value")
 791   fi
 792
 793   # Append --depends X and other arguments specified by fpm-info.sh in
 794   # the package source dir. These are added last so they can override
 795   # the arguments added by this script.
 796   declare -a fpm_args=()
 797   declare -a build_depends=()
 798   declare -a fpm_depends=()
 799   declare -a fpm_exclude=()
 800   if [[ ! -d "$SRC_DIR" ]]; then
 801       echo >&2 "BUG: looking in wrong dir for fpm-info.sh: $pkgdir"
 802       exit 1
 803   fi
 804   fpminfo="${SRC_DIR}/fpm-info.sh"
 805   if [[ -e "$fpminfo" ]]; then
 806       debug_echo "Loading fpm overrides from $fpminfo"
 807       source "$fpminfo"
 808   fi
 809   for pkg in "${build_depends[@]}"; do
 810       if [[ $TARGET =~ debian|ubuntu ]]; then
 811           pkg_deb=$(ls "$WORKSPACE/packages/$TARGET/$pkg_"*.deb | sort -rg | awk 'NR==1')
 812           if [[ -e $pkg_deb ]]; then
 813               echo "Installing build_dep $pkg from $pkg_deb"
 814               dpkg -i "$pkg_deb"
 815           else
 816               echo "Attemping to install build_dep $pkg using apt-get"
 817               apt-get install -y "$pkg"
 818           fi
 819           apt-get -y -f install
 820       else
 821           pkg_rpm=$(ls "$WORKSPACE/packages/$TARGET/$pkg"-[0-9]*.rpm | sort -rg | awk 'NR==1')
 822           if [[ -e $pkg_rpm ]]; then
 823               echo "Installing build_dep $pkg from $pkg_rpm"
 824               rpm -i "$pkg_rpm"
 825           else
 826               echo "Attemping to install build_dep $pkg"
 827               rpm -i "$pkg"
 828           fi
 829       fi
 830   done
 831   for i in "${fpm_depends[@]}"; do
 832     COMMAND_ARR+=('--depends' "$i")
 833   done
 834   for i in "${fpm_exclude[@]}"; do
 835     COMMAND_ARR+=('--exclude' "$i")
 836   done
 837
 838   COMMAND_ARR+=("${fpm_args[@]}")
 839
 840   # Append remaining function arguments directly to fpm's command line.
 841   for i; do
 842     COMMAND_ARR+=("$i")
 843   done
 844
 845   COMMAND_ARR+=("$PACKAGE")
 846
 847   debug_echo -e "\n${COMMAND_ARR[@]}\n"
 848
 849   FPM_RESULTS=$("${COMMAND_ARR[@]}")
 850   FPM_EXIT_CODE=$?
 851
 852   fpm_verify $FPM_EXIT_CODE $FPM_RESULTS
 853
 854   # if something went wrong and debug is off, print out the fpm command that errored
 855   if [[ 0 -ne $? ]] && [[ "$STDOUT_IF_DEBUG" == "/dev/null" ]]; then
 856     echo -e "\n${COMMAND_ARR[@]}\n"
 857   fi
 858 }
 859
 860 # verify build results
 861 fpm_verify () {
 862   FPM_EXIT_CODE=$1
 863   shift
 864   FPM_RESULTS=$@
 865
 866   FPM_PACKAGE_NAME=''
 867   if [[ $FPM_RESULTS =~ ([A-Za-z0-9_\.-]*\.)(deb|rpm) ]]; then
 868     FPM_PACKAGE_NAME=${BASH_REMATCH[1]}${BASH_REMATCH[2]}
 869   fi
 870
 871   if [[ "$FPM_PACKAGE_NAME" == "" ]]; then
 872     EXITCODE=1
 873     echo
 874     echo "Error: $PACKAGE: Unable to figure out package name from fpm results:"
 875     echo
 876     echo $FPM_RESULTS
 877     echo
 878     return 1
 879   elif [[ "$FPM_RESULTS" =~ "File already exists" ]]; then
 880     echo "Package $FPM_PACKAGE_NAME exists, not rebuilding"
 881     return 0
 882   elif [[ 0 -ne "$FPM_EXIT_CODE" ]]; then
 883     EXITCODE=1
 884     echo "Error building package for $1:\n $FPM_RESULTS"
 885     return 1
 886   fi
 887 }
 888
 889 install_package() {
 890   PACKAGES=$@
 891   if [[ "$FORMAT" == "deb" ]]; then
 892     $SUDO apt-get install $PACKAGES --yes
 893   elif [[ "$FORMAT" == "rpm" ]]; then
 894     $SUDO yum -q -y install $PACKAGES
 895   fi
 896 }
 897
 898 title() {
 899     printf '%s %s\n' "=======" "$1"
 900 }
 901
 902 checkexit() {
 903     if [[ "$1" != "0" ]]; then
 904         title "$2 -- FAILED"
 905         failures+=("$2 (`timer`)")
 906     else
 907         successes+=("$2 (`timer`)")
 908     fi
 909 }
 910
 911 timer_reset() {
 912     t0=$SECONDS
 913 }
 914
 915 timer() {
 916     if [[ -n "$t0" ]]; then
 917         echo -n "$(($SECONDS - $t0))s"
 918     fi
 919 }
 920
 921 report_outcomes() {
 922     for x in "${successes[@]}"
 923     do
 924         echo "Pass: $x"
 925     done
 926
 927     if [[ ${#failures[@]} == 0 ]]
 928     then
 929         if [[ ${#successes[@]} != 0 ]]; then
 930            echo "All test suites passed."
 931         fi
 932     else
 933         echo "Failures (${#failures[@]}):"
 934         for x in "${failures[@]}"
 935         do
 936             echo "Fail: $x"
 937         done
 938     fi
 939 }