build/run-build-packages.sh

   1 #!/bin/bash
   2 # Copyright (C) The Arvados Authors. All rights reserved.
   3 #
   4 # SPDX-License-Identifier: AGPL-3.0
   5
   6 . `dirname "$(readlink -f "$0")"`/run-library.sh
   7 . `dirname "$(readlink -f "$0")"`/libcloud-pin.sh
   8
   9 read -rd "\000" helpmessage <<EOF
  10 $(basename $0): Build Arvados packages
  11
  12 Syntax:
  13         WORKSPACE=/path/to/arvados $(basename $0) [options]
  14
  15 Options:
  16
  17 --build-bundle-packages  (default: false)
  18     Build api server and workbench packages with vendor/bundle included
  19 --debug
  20     Output debug information (default: false)
  21 --target <target>
  22     Distribution to build packages for (default: debian9)
  23 --only-build <package>
  24     Build only a specific package (or $ONLY_BUILD from environment)
  25 --command
  26     Build command to execute (defaults to the run command defined in the
  27     Docker image)
  28
  29 WORKSPACE=path         Path to the Arvados source tree to build packages from
  30
  31 EOF
  32
  33 # Begin of user configuration
  34
  35 # set to --no-cache-dir to disable pip caching
  36 CACHE_FLAG=
  37
  38 MAINTAINER="Ward Vandewege <wvandewege@veritasgenetics.com>"
  39 VENDOR="Veritas Genetics, Inc."
  40
  41 # End of user configuration
  42
  43 DEBUG=${ARVADOS_DEBUG:-0}
  44 EXITCODE=0
  45 TARGET=debian9
  46 COMMAND=
  47
  48 PARSEDOPTS=$(getopt --name "$0" --longoptions \
  49     help,build-bundle-packages,debug,target:,only-build: \
  50     -- "" "$@")
  51 if [ $? -ne 0 ]; then
  52     exit 1
  53 fi
  54
  55 eval set -- "$PARSEDOPTS"
  56 while [ $# -gt 0 ]; do
  57     case "$1" in
  58         --help)
  59             echo >&2 "$helpmessage"
  60             echo >&2
  61             exit 1
  62             ;;
  63         --target)
  64             TARGET="$2"; shift
  65             ;;
  66         --only-build)
  67             ONLY_BUILD="$2"; shift
  68             ;;
  69         --debug)
  70             DEBUG=1
  71             ;;
  72         --command)
  73             COMMAND="$2"; shift
  74             ;;
  75         --)
  76             if [ $# -gt 1 ]; then
  77                 echo >&2 "$0: unrecognized argument '$2'. Try: $0 --help"
  78                 exit 1
  79             fi
  80             ;;
  81     esac
  82     shift
  83 done
  84
  85 if [[ "$COMMAND" != "" ]]; then
  86   COMMAND="/usr/local/rvm/bin/rvm-exec default bash /jenkins/$COMMAND --target $TARGET"
  87 fi
  88
  89 STDOUT_IF_DEBUG=/dev/null
  90 STDERR_IF_DEBUG=/dev/null
  91 DASHQ_UNLESS_DEBUG=-q
  92 if [[ "$DEBUG" != 0 ]]; then
  93     STDOUT_IF_DEBUG=/dev/stdout
  94     STDERR_IF_DEBUG=/dev/stderr
  95     DASHQ_UNLESS_DEBUG=
  96 fi
  97
  98 declare -a PYTHON_BACKPORTS PYTHON3_BACKPORTS
  99
 100 PYTHON2_VERSION=2.7
 101 PYTHON3_VERSION=$(python3 -c 'import sys; print("{v.major}.{v.minor}".format(v=sys.version_info))')
 102
 103 ## These defaults are suitable for any Debian-based distribution.
 104 # You can customize them as needed in distro sections below.
 105 PYTHON2_PACKAGE=python$PYTHON2_VERSION
 106 PYTHON2_PKG_PREFIX=python
 107 PYTHON2_PREFIX=/usr
 108 PYTHON2_INSTALL_LIB=lib/python$PYTHON2_VERSION/dist-packages
 109
 110 PYTHON3_PACKAGE=python$PYTHON3_VERSION
 111 PYTHON3_PKG_PREFIX=python3
 112 PYTHON3_PREFIX=/usr
 113 PYTHON3_INSTALL_LIB=lib/python$PYTHON3_VERSION/dist-packages
 114 ## End Debian Python defaults.
 115
 116 case "$TARGET" in
 117     debian*)
 118         FORMAT=deb
 119         ;;
 120     ubuntu*)
 121         FORMAT=deb
 122         ;;
 123     centos*)
 124         FORMAT=rpm
 125         PYTHON2_PACKAGE=$(rpm -qf "$(which python$PYTHON2_VERSION)" --queryformat '%{NAME}\n')
 126         PYTHON2_PKG_PREFIX=$PYTHON2_PACKAGE
 127         PYTHON2_INSTALL_LIB=lib/python$PYTHON2_VERSION/site-packages
 128         PYTHON3_PACKAGE=$(rpm -qf "$(which python$PYTHON3_VERSION)" --queryformat '%{NAME}\n')
 129         PYTHON3_PKG_PREFIX=$PYTHON3_PACKAGE
 130         PYTHON3_PREFIX=/opt/rh/rh-python36/root/usr
 131         PYTHON3_INSTALL_LIB=lib/python$PYTHON3_VERSION/site-packages
 132         export PYCURL_SSL_LIBRARY=nss
 133         ;;
 134     *)
 135         echo -e "$0: Unknown target '$TARGET'.\n" >&2
 136         exit 1
 137         ;;
 138 esac
 139
 140
 141 if ! [[ -n "$WORKSPACE" ]]; then
 142   echo >&2 "$helpmessage"
 143   echo >&2
 144   echo >&2 "Error: WORKSPACE environment variable not set"
 145   echo >&2
 146   exit 1
 147 fi
 148
 149 # Test for fpm
 150 fpm --version >/dev/null 2>&1
 151
 152 if [[ "$?" != 0 ]]; then
 153   echo >&2 "$helpmessage"
 154   echo >&2
 155   echo >&2 "Error: fpm not found"
 156   echo >&2
 157   exit 1
 158 fi
 159
 160 PYTHON2_FPM_INSTALLER=(--python-easyinstall "$(find_python_program easy_install-$PYTHON2_VERSION easy_install)")
 161 install3=$(find_python_program easy_install-$PYTHON3_VERSION easy_install3 pip-$PYTHON3_VERSION pip3)
 162 if [[ $install3 =~ easy_ ]]; then
 163     PYTHON3_FPM_INSTALLER=(--python-easyinstall "$install3")
 164 else
 165     PYTHON3_FPM_INSTALLER=(--python-pip "$install3")
 166 fi
 167
 168 RUN_BUILD_PACKAGES_PATH="`dirname \"$0\"`"
 169 RUN_BUILD_PACKAGES_PATH="`( cd \"$RUN_BUILD_PACKAGES_PATH\" && pwd )`"  # absolutized and normalized
 170 if [ -z "$RUN_BUILD_PACKAGES_PATH" ] ; then
 171   # error; for some reason, the path is not accessible
 172   # to the script (e.g. permissions re-evaled after suid)
 173   exit 1  # fail
 174 fi
 175
 176 debug_echo "$0 is running from $RUN_BUILD_PACKAGES_PATH"
 177 debug_echo "Workspace is $WORKSPACE"
 178
 179 if [[ -f /etc/profile.d/rvm.sh ]]; then
 180     source /etc/profile.d/rvm.sh
 181     GEM="rvm-exec default gem"
 182 else
 183     GEM=gem
 184 fi
 185
 186 # Make all files world-readable -- jenkins runs with umask 027, and has checked
 187 # out our git tree here
 188 chmod o+r "$WORKSPACE" -R
 189
 190 # More cleanup - make sure all executables that we'll package are 755
 191 cd "$WORKSPACE"
 192 find -type d -name 'bin' |xargs -I {} find {} -type f |xargs -I {} chmod 755 {}
 193
 194 # Now fix our umask to something better suited to building and publishing
 195 # gems and packages
 196 umask 0022
 197
 198 debug_echo "umask is" `umask`
 199
 200 if [[ ! -d "$WORKSPACE/packages/$TARGET" ]]; then
 201   mkdir -p $WORKSPACE/packages/$TARGET
 202   chown --reference="$WORKSPACE" "$WORKSPACE/packages/$TARGET"
 203 fi
 204
 205 # Perl packages
 206 debug_echo -e "\nPerl packages\n"
 207
 208 if [[ -z "$ONLY_BUILD" ]] || [[ "libarvados-perl" = "$ONLY_BUILD" ]] ; then
 209   cd "$WORKSPACE/sdk/perl"
 210   libarvados_perl_version="$(version_from_git)"
 211
 212   cd $WORKSPACE/packages/$TARGET
 213   test_package_presence libarvados-perl "$libarvados_perl_version"
 214
 215   if [[ "$?" == "0" ]]; then
 216     cd "$WORKSPACE/sdk/perl"
 217
 218     if [[ -e Makefile ]]; then
 219       make realclean >"$STDOUT_IF_DEBUG"
 220     fi
 221     find -maxdepth 1 \( -name 'MANIFEST*' -or -name "libarvados-perl*.$FORMAT" \) \
 222         -delete
 223     rm -rf install
 224
 225     perl Makefile.PL INSTALL_BASE=install >"$STDOUT_IF_DEBUG" && \
 226         make install INSTALLDIRS=perl >"$STDOUT_IF_DEBUG" && \
 227         fpm_build install/lib/=/usr/share libarvados-perl \
 228         dir "$(version_from_git)" install/man/=/usr/share/man \
 229         "$WORKSPACE/apache-2.0.txt=/usr/share/doc/libarvados-perl/apache-2.0.txt" && \
 230         mv --no-clobber libarvados-perl*.$FORMAT "$WORKSPACE/packages/$TARGET/"
 231   fi
 232 fi
 233
 234 # Ruby gems
 235 debug_echo -e "\nRuby gems\n"
 236
 237 FPM_GEM_PREFIX=$($GEM environment gemdir)
 238
 239 cd "$WORKSPACE/sdk/ruby"
 240 handle_ruby_gem arvados
 241
 242 cd "$WORKSPACE/sdk/cli"
 243 handle_ruby_gem arvados-cli
 244
 245 cd "$WORKSPACE/services/login-sync"
 246 handle_ruby_gem arvados-login-sync
 247
 248 # Python packages
 249 debug_echo -e "\nPython packages\n"
 250
 251 # arvados-src
 252 (
 253     cd "$WORKSPACE"
 254     COMMIT_HASH=$(format_last_commit_here "%H")
 255     arvados_src_version="$(version_from_git)"
 256
 257     cd $WORKSPACE/packages/$TARGET
 258     test_package_presence arvados-src $arvados_src_version src ""
 259
 260     if [[ "$?" == "0" ]]; then
 261       cd "$WORKSPACE"
 262       SRC_BUILD_DIR=$(mktemp -d)
 263       # mktemp creates the directory with 0700 permissions by default
 264       chmod 755 $SRC_BUILD_DIR
 265       git clone $DASHQ_UNLESS_DEBUG "$WORKSPACE/.git" "$SRC_BUILD_DIR"
 266       cd "$SRC_BUILD_DIR"
 267
 268       # go into detached-head state
 269       git checkout $DASHQ_UNLESS_DEBUG "$COMMIT_HASH"
 270       echo "$COMMIT_HASH" >git-commit.version
 271
 272       cd "$SRC_BUILD_DIR"
 273       PKG_VERSION=$(version_from_git)
 274       cd $WORKSPACE/packages/$TARGET
 275       fpm_build $SRC_BUILD_DIR/=/usr/local/arvados/src arvados-src 'dir' "$PKG_VERSION" "--exclude=usr/local/arvados/src/.git" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=The Arvados source code" "--architecture=all"
 276
 277       rm -rf "$SRC_BUILD_DIR"
 278     fi
 279 )
 280
 281 # Go binaries
 282 cd $WORKSPACE/packages/$TARGET
 283 export GOPATH=$(mktemp -d)
 284 go get github.com/kardianos/govendor
 285 package_go_binary cmd/arvados-client arvados-client \
 286     "Arvados command line tool (beta)"
 287 package_go_binary cmd/arvados-server arvados-server \
 288     "Arvados server daemons"
 289 package_go_binary cmd/arvados-server arvados-controller \
 290     "Arvados cluster controller daemon"
 291 package_go_binary cmd/arvados-server arvados-dispatch-cloud \
 292     "Arvados cluster cloud dispatch"
 293 package_go_binary services/arv-git-httpd arvados-git-httpd \
 294     "Provide authenticated http access to Arvados-hosted git repositories"
 295 package_go_binary services/crunch-dispatch-local crunch-dispatch-local \
 296     "Dispatch Crunch containers on the local system"
 297 package_go_binary services/crunch-dispatch-slurm crunch-dispatch-slurm \
 298     "Dispatch Crunch containers to a SLURM cluster"
 299 package_go_binary services/crunch-run crunch-run \
 300     "Supervise a single Crunch container"
 301 package_go_binary services/crunchstat crunchstat \
 302     "Gather cpu/memory/network statistics of running Crunch jobs"
 303 package_go_binary services/health arvados-health \
 304     "Check health of all Arvados cluster services"
 305 package_go_binary services/keep-balance keep-balance \
 306     "Rebalance and garbage-collect data blocks stored in Arvados Keep"
 307 package_go_binary services/keepproxy keepproxy \
 308     "Make a Keep cluster accessible to clients that are not on the LAN"
 309 package_go_binary services/keepstore keepstore \
 310     "Keep storage daemon, accessible to clients on the LAN"
 311 package_go_binary services/keep-web keep-web \
 312     "Static web hosting service for user data stored in Arvados Keep"
 313 package_go_binary services/ws arvados-ws \
 314     "Arvados Websocket server"
 315 package_go_binary tools/sync-groups arvados-sync-groups \
 316     "Synchronize remote groups into Arvados from an external source"
 317 package_go_binary tools/keep-block-check keep-block-check \
 318     "Verify that all data from one set of Keep servers to another was copied"
 319 package_go_binary tools/keep-rsync keep-rsync \
 320     "Copy all data from one set of Keep servers to another"
 321 package_go_binary tools/keep-exercise keep-exercise \
 322     "Performance testing tool for Arvados Keep"
 323
 324 # The Python SDK - Should be built first because it's needed by others
 325 fpm_build_virtualenv "arvados-python-client" "sdk/python"
 326
 327 # Arvados cwl runner
 328 fpm_build_virtualenv "arvados-cwl-runner" "sdk/cwl"
 329
 330 # The PAM module
 331 fpm_build_virtualenv "libpam-arvados" "sdk/pam"
 332
 333 # The FUSE driver
 334 fpm_build_virtualenv "arvados-fuse" "services/fuse"
 335
 336 # The node manager
 337 fpm_build_virtualenv "arvados-node-manager" "services/nodemanager"
 338
 339 # The Arvados crunchstat-summary tool
 340 fpm_build_virtualenv "crunchstat-summary" "tools/crunchstat-summary"
 341
 342 # The Python SDK - Python3 package
 343 fpm_build_virtualenv "arvados-python-client" "sdk/python" "python3"
 344
 345 # The Docker image cleaner
 346 fpm_build_virtualenv "arvados-docker-cleaner" "services/dockercleaner" "python3"
 347
 348 # The cwltest package, which lives out of tree
 349 cd "$WORKSPACE"
 350 if [[ -e "$WORKSPACE/cwltest" ]]; then
 351         rm -rf "$WORKSPACE/cwltest"
 352 fi
 353 git clone https://github.com/common-workflow-language/cwltest.git
 354 # signal to our build script that we want a cwltest executable installed in /usr/bin/
 355 mkdir cwltest/bin && touch cwltest/bin/cwltest
 356 fpm_build_virtualenv "cwltest" "cwltest"
 357 rm -rf "$WORKSPACE/cwltest"
 358
 359 calculate_go_package_version arvados_server_version cmd/arvados-server
 360 arvados_server_iteration=$(default_iteration "arvados-server" "$arvados_server_version" "go")
 361
 362 # Build the API server package
 363 test_rails_package_presence arvados-api-server "$WORKSPACE/services/api"
 364 if [[ "$?" == "0" ]]; then
 365   handle_rails_package arvados-api-server "$WORKSPACE/services/api" \
 366       "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
 367       --description="Arvados API server - Arvados is a free and open source platform for big data science." \
 368       --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
 369 fi
 370
 371 # Build the workbench server package
 372 test_rails_package_presence arvados-workbench "$WORKSPACE/apps/workbench"
 373 if [[ "$?" == "0" ]] ; then
 374   (
 375       set -e
 376
 377       # The workbench package has a build-time dependency on the arvados-server
 378       # package for config manipulation, so install it first.
 379       cd $WORKSPACE/cmd/arvados-server
 380       get_complete_package_name arvados_server_pkgname arvados-server ${arvados_server_version} go
 381
 382       arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/${arvados_server_pkgname}"
 383       if [[ ! -e ${arvados_server_pkg_path} ]]; then
 384         arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/processed/${arvados_server_pkgname}"
 385       fi
 386       if [[ "$FORMAT" == "deb" ]]; then
 387         dpkg -i ${arvados_server_pkg_path}
 388       else
 389         rpm -i ${arvados_server_pkg_path}
 390       fi
 391
 392       cd "$WORKSPACE/apps/workbench"
 393
 394       # We need to bundle to be ready even when we build a package without vendor directory
 395       # because asset compilation requires it.
 396       bundle install --system >"$STDOUT_IF_DEBUG"
 397
 398       # clear the tmp directory; the asset generation step will recreate tmp/cache/assets,
 399       # and we want that in the package, so it's easier to not exclude the tmp directory
 400       # from the package - empty it instead.
 401       rm -rf tmp
 402       mkdir tmp
 403
 404       # Set up an appropriate config.yml
 405       arvados-server config-dump -config <(cat /etc/arvados/config.yml 2>/dev/null || echo  "Clusters: {zzzzz: {}}") > /tmp/x
 406       mkdir -p /etc/arvados/
 407       mv /tmp/x /etc/arvados/config.yml
 408       perl -p -i -e 'BEGIN{undef $/;} s/WebDAV(.*?):\n( *)ExternalURL: ""/WebDAV$1:\n$2ExternalURL: "example.com"/g' /etc/arvados/config.yml
 409
 410       RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake npm:install >"$STDOUT_IF_DEBUG"
 411       RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake assets:precompile >"$STDOUT_IF_DEBUG"
 412
 413       # Remove generated configuration files so they don't go in the package.
 414       rm -rf /etc/arvados/
 415   )
 416
 417   if [[ "$?" != "0" ]]; then
 418     echo "ERROR: Asset precompilation failed"
 419     EXITCODE=1
 420   else
 421     handle_rails_package arvados-workbench "$WORKSPACE/apps/workbench" \
 422         "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
 423         --description="Arvados Workbench - Arvados is a free and open source platform for big data science." \
 424         --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
 425   fi
 426 fi
 427
 428 # clean up temporary GOPATH
 429 rm -rf "$GOPATH"
 430
 431 exit $EXITCODE