2 # Copyright (C) The Arvados Authors. All rights reserved.
4 # SPDX-License-Identifier: AGPL-3.0
6 . `dirname "$(readlink -f "$0")"`/libcloud-pin.sh
9 . `dirname "$(readlink -f "$0")"`/run-library.sh
11 read -rd "\000" helpmessage <<EOF
12 $(basename $0): Install and test Arvados components.
14 Exit non-zero if any tests fail.
17 $(basename $0) WORKSPACE=/path/to/arvados [options]
21 --skip FOO Do not test the FOO component.
22 --skip sanity Skip initial dev environment sanity checks.
23 --skip install Do not run any install steps. Just run tests.
24 You should provide GOPATH, GEMHOME, and VENVDIR options
25 from a previous invocation if you use this option.
26 --only FOO Do not test anything except the FOO component.
27 --temp DIR Install components and dependencies under DIR instead of
28 making a new temporary directory. Implies --leave-temp.
29 --leave-temp Do not remove GOPATH, virtualenv, and other temp dirs at exit.
30 Instead, show the path to give as --temp to reuse them in
31 subsequent invocations.
32 --repeat N Repeat each install/test step until it succeeds N times.
33 --retry Prompt to retry if an install or test suite fails.
34 --only-install Run specific install step
35 --short Skip (or scale down) some slow tests.
36 --interactive Set up, then prompt for test/install steps to perform.
37 WORKSPACE=path Arvados source tree to test.
38 CONFIGSRC=path Dir with api server config files to copy into source tree.
39 (If none given, leave config files alone in source tree.)
40 services/api_test="TEST=test/functional/arvados/v1/collections_controller_test.rb"
41 Restrict apiserver tests to the given file
42 sdk/python_test="--test-suite tests.test_keep_locator"
43 Restrict Python SDK tests to the given class
44 apps/workbench_test="TEST=test/integration/pipeline_instances_test.rb"
45 Restrict Workbench tests to the given file
46 services/arv-git-httpd_test="-check.vv"
47 Show all log messages, even when tests pass (also works
48 with services/keepstore_test etc.)
50 Print more debug messages
51 envvar=value Set \$envvar to value. Primarily useful for WORKSPACE,
52 *_test, and other examples shown above.
54 Assuming "--skip install" is not given, all components are installed
55 into \$GOPATH, \$VENDIR, and \$GEMHOME before running any tests. Many
56 test suites depend on other components being installed, and installing
57 everything tends to be quicker than debugging dependencies.
59 As a special concession to the current CI server config, CONFIGSRC
60 defaults to $HOME/arvados-api-server if that directory exists.
62 More information and background:
64 https://arvados.org/projects/arvados/wiki/Running_tests
69 apps/workbench_units (*)
70 apps/workbench_functionals (*)
71 apps/workbench_integration (*)
72 apps/workbench_benchmark
73 apps/workbench_profile
84 lib/dispatchcloud/container
85 lib/dispatchcloud/scheduler
86 lib/dispatchcloud/ssh_executor
87 lib/dispatchcloud/worker
90 services/arv-git-httpd
92 services/dockercleaner
101 services/nodemanager_integration
103 services/crunch-dispatch-local
104 services/crunch-dispatch-slurm
126 tools/crunchstat-summary
127 tools/crunchstat-summary:py3
130 tools/keep-block-check
132 (*) apps/workbench is shorthand for apps/workbench_units +
133 apps/workbench_functionals + apps/workbench_integration
137 # First make sure to remove any ARVADOS_ variables from the calling
138 # environment that could interfere with the tests.
139 unset $(env | cut -d= -f1 | grep \^ARVADOS_)
141 # Reset other variables that could affect our [tests'] behavior by
151 export LANG=en_US.UTF-8
159 if [[ -z "$temp" ]]; then
160 # we didn't even get as far as making a temp dir
162 elif [[ -z "$temp_preserve" ]]; then
165 echo "Leaving behind temp dirs in $temp"
171 echo >&2 "Fatal: $* (encountered in ${FUNCNAME[1]} at ${BASH_SOURCE[1]} line ${BASH_LINENO[0]})"
177 if which create-plot-data-from-log.sh >/dev/null; then
178 create-plot-data-from-log.sh $BUILD_NUMBER "$WORKSPACE/apps/workbench/log/test.log" "$WORKSPACE/apps/workbench/log/"
180 rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
182 rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
189 [[ -n "${skip[sanity]}" ]] && return 0
190 ( [[ -n "$WORKSPACE" ]] && [[ -d "$WORKSPACE/services" ]] ) \
191 || fatal "WORKSPACE environment variable not set to a source directory (see: $0 --help)"
192 echo Checking dependencies:
193 echo "locale: ${LANG}"
194 [[ "$(locale charmap)" = "UTF-8" ]] \
195 || fatal "Locale '${LANG}' is broken/missing. Try: echo ${LANG} | sudo tee -a /etc/locale.gen && sudo locale-gen"
196 echo -n 'virtualenv: '
197 virtualenv --version \
198 || fatal "No virtualenv. Try: apt-get install virtualenv (on ubuntu: python-virtualenv)"
201 || fatal "No ruby. Install >=2.1.9 (using rbenv, rvm, or source)"
204 || fatal "No go binary. See http://golang.org/doc/install"
205 [[ $(go version) =~ go1.([0-9]+) ]] && [[ ${BASH_REMATCH[1]} -ge 10 ]] \
206 || fatal "Go >= 1.10 required. See http://golang.org/doc/install"
208 gcc --version | egrep ^gcc \
209 || fatal "No gcc. Try: apt-get install build-essential"
211 find /usr/include -path '*fuse/fuse.h' | egrep --max-count=1 . \
212 || fatal "No fuse/fuse.h. Try: apt-get install libfuse-dev"
214 find /usr/include -path '*gnutls/gnutls.h' | egrep --max-count=1 . \
215 || fatal "No gnutls/gnutls.h. Try: apt-get install libgnutls28-dev"
216 echo -n 'Python2 pyconfig.h: '
217 find /usr/include -path '*/python2*/pyconfig.h' | egrep --max-count=1 . \
218 || fatal "No Python2 pyconfig.h. Try: apt-get install python2.7-dev"
219 echo -n 'Python3 pyconfig.h: '
220 find /usr/include -path '*/python3*/pyconfig.h' | egrep --max-count=1 . \
221 || fatal "No Python3 pyconfig.h. Try: apt-get install python3-dev"
223 PATH="$PATH:/sbin:/usr/sbin:/usr/local/sbin" nginx -v \
224 || fatal "No nginx. Try: apt-get install nginx"
226 perl -v | grep version \
227 || fatal "No perl. Try: apt-get install perl"
228 for mod in ExtUtils::MakeMaker JSON LWP Net::SSL; do
229 echo -n "perl $mod: "
230 perl -e "use $mod; print \"\$$mod::VERSION\\n\"" \
231 || fatal "No $mod. Try: apt-get install perl-modules libcrypt-ssleay-perl libjson-perl libwww-perl"
235 || fatal "No gitolite. Try: apt-get install gitolite3"
238 || fatal "No npm. Try: wget -O- https://nodejs.org/dist/v6.11.2/node-v6.11.2-linux-x64.tar.xz | sudo tar -C /usr/local -xJf - && sudo ln -s ../node-v6.11.2-linux-x64/bin/{node,npm} /usr/local/bin/"
240 cadaver --version | grep -w cadaver \
241 || fatal "No cadaver. Try: apt-get install cadaver"
242 echo -n 'libattr1 xattr.h: '
243 find /usr/include -path '*/attr/xattr.h' | egrep --max-count=1 . \
244 || fatal "No libattr1 xattr.h. Try: apt-get install libattr1-dev"
245 echo -n 'libcurl curl.h: '
246 find /usr/include -path '*/curl/curl.h' | egrep --max-count=1 . \
247 || fatal "No libcurl curl.h. Try: apt-get install libcurl4-gnutls-dev"
248 echo -n 'libpq libpq-fe.h: '
249 find /usr/include -path '*/postgresql/libpq-fe.h' | egrep --max-count=1 . \
250 || fatal "No libpq libpq-fe.h. Try: apt-get install libpq-dev"
251 echo -n 'services/api/config/database.yml: '
252 if [[ ! -f "$WORKSPACE/services/api/config/database.yml" ]]; then
253 fatal "Please provide a database.yml file for the test suite"
257 echo -n 'postgresql: '
258 psql --version || fatal "No postgresql. Try: apt-get install postgresql postgresql-client-common"
259 echo -n 'phantomjs: '
260 phantomjs --version || fatal "No phantomjs. Try: apt-get install phantomjs"
262 which Xvfb || fatal "No xvfb. Try: apt-get install xvfb"
264 dot -V || fatal "No graphviz. Try: apt-get install graphviz"
265 echo -n 'geckodriver: '
266 geckodriver --version | grep ^geckodriver || echo "No geckodriver. Try: wget -O- https://github.com/mozilla/geckodriver/releases/download/v0.23.0/geckodriver-v0.23.0-linux64.tar.gz | sudo tar -C /usr/local/bin -xzf - geckodriver"
268 if [[ "$NEED_SDK_R" = true ]]; then
271 which Rscript || fatal "No Rscript. Try: apt-get install r-base"
273 Rscript -e "library('testthat')" || fatal "No testthat. Try: apt-get install r-cran-testthat"
274 # needed for roxygen2, needed for devtools, needed for R sdk
275 pkg-config --exists libxml-2.0 || fatal "No libxml2. Try: apt-get install libxml2-dev"
276 # needed for pkgdown, builds R SDK doc pages
277 which pandoc || fatal "No pandoc. Try: apt-get install pandoc"
282 # i.e. rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
283 # $BUILD_NUMBER is set by Jenkins if this script is being called as part of a Jenkins run
284 if [[ -f "$1/$2" ]]; then
285 THEDATE=`date +%Y%m%d%H%M%S`
286 mv "$1/$2" "$1/$THEDATE-$BUILD_NUMBER-$2"
287 gzip "$1/$THEDATE-$BUILD_NUMBER-$2"
295 skip[apps/workbench_profile]=1
296 # nodemanager_integration tests are not reliable, see #12061.
297 skip[services/nodemanager_integration]=1
304 echo >&2 "$helpmessage"
312 only[$1]=1; skip[$1]=""; shift
324 only_install="$1"; shift
334 repeat=$((${1}+0)); shift
340 suite="${arg%%_test=*}"
342 testargs["$suite"]="$args"
345 eval export $(echo $arg | cut -d= -f1)=\"$(echo $arg | cut -d= -f2-)\"
348 echo >&2 "$0: Unrecognized option: '$arg'. Try: $0 --help"
354 # R SDK installation is very slow (~360s in a clean environment) and only
355 # required when testing it. Skip that step if it is not needed.
358 if [[ ${#only[@]} -ne 0 ]] &&
359 [[ -z "${only['sdk/R']}" && -z "${only['doc']}" ]]; then
363 if [[ ${skip["sdk/R"]} == 1 && ${skip["doc"]} == 1 ]]; then
367 if [[ $NEED_SDK_R == false ]]; then
368 echo "R SDK not needed, it will not be installed."
373 pid="$(cat "$WORKSPACE/tmp/${svc}.pid")"
374 if [[ -z "$pid" ]] || ! kill -0 "$pid"; then
375 tail $WORKSPACE/tmp/${1}*.log
376 echo "${svc} pid ${pid} not running"
379 echo "${svc} pid ${pid} ok"
382 checkdiscoverydoc() {
383 dd="https://${1}/discovery/v1/apis/arvados/v1/rest"
384 if ! (set -o pipefail; curl -fsk "$dd" | grep -q ^{ ); then
385 echo >&2 "ERROR: could not retrieve discovery doc from RailsAPI at $dd"
386 tail -v $WORKSPACE/services/api/log/test.log
393 if [[ -n "$ARVADOS_TEST_API_HOST" ]]; then
396 . "$VENVDIR/bin/activate"
397 echo 'Starting API, keepproxy, keep-web, ws, arv-git-httpd, and nginx ssl proxy...'
398 if [[ ! -d "$WORKSPACE/services/api/log" ]]; then
399 mkdir -p "$WORKSPACE/services/api/log"
401 # Remove empty api.pid file if it exists
402 if [[ -f "$WORKSPACE/tmp/api.pid" && ! -s "$WORKSPACE/tmp/api.pid" ]]; then
403 rm -f "$WORKSPACE/tmp/api.pid"
405 all_services_stopped=
408 && eval $(python sdk/python/tests/run_test_server.py start --auth admin || echo "fail=1; false") \
409 && export ARVADOS_TEST_API_HOST="$ARVADOS_API_HOST" \
410 && export ARVADOS_TEST_API_INSTALLED="$$" \
411 && checkpidfile api \
412 && checkdiscoverydoc $ARVADOS_API_HOST \
413 && python sdk/python/tests/run_test_server.py start_controller \
414 && checkpidfile controller \
415 && python sdk/python/tests/run_test_server.py start_keep_proxy \
416 && checkpidfile keepproxy \
417 && python sdk/python/tests/run_test_server.py start_keep-web \
418 && checkpidfile keep-web \
419 && python sdk/python/tests/run_test_server.py start_arv-git-httpd \
420 && checkpidfile arv-git-httpd \
421 && python sdk/python/tests/run_test_server.py start_ws \
423 && eval $(python sdk/python/tests/run_test_server.py start_nginx || echo "fail=1; false") \
424 && checkdiscoverydoc $ARVADOS_API_HOST \
425 && checkpidfile nginx \
426 && export ARVADOS_TEST_PROXY_SERVICES=1 \
427 && (env | egrep ^ARVADOS) \
430 if [[ $fail = 0 ]] && ! kill -0 "$(cat "$WORKSPACE/tmp/nginx.pid")"; then
431 echo >&2 "ERROR: nginx seems to have died already"
434 if [[ $fail != 0 ]]; then
435 unset ARVADOS_TEST_API_HOST
441 if [[ -n "$all_services_stopped" ]]; then
444 unset ARVADOS_TEST_API_HOST ARVADOS_TEST_PROXY_SERVICES
445 . "$VENVDIR/bin/activate" || return
447 && python sdk/python/tests/run_test_server.py stop_nginx \
448 && python sdk/python/tests/run_test_server.py stop_arv-git-httpd \
449 && python sdk/python/tests/run_test_server.py stop_ws \
450 && python sdk/python/tests/run_test_server.py stop_keep-web \
451 && python sdk/python/tests/run_test_server.py stop_keep_proxy \
452 && python sdk/python/tests/run_test_server.py stop_controller \
453 && python sdk/python/tests/run_test_server.py stop \
454 && all_services_stopped=1
459 failures+=("($(basename $0) interrupted)")
464 setup_ruby_environment() {
465 if [[ -s "$HOME/.rvm/scripts/rvm" ]] ; then
466 source "$HOME/.rvm/scripts/rvm"
468 elif [[ -s "/usr/local/rvm/scripts/rvm" ]] ; then
469 source "/usr/local/rvm/scripts/rvm"
475 if [[ "$using_rvm" == true ]]; then
476 # If rvm is in use, we can't just put separate "dependencies"
477 # and "gems-under-test" paths to GEM_PATH: passenger resets
478 # the environment to the "current gemset", which would lose
479 # our GEM_PATH and prevent our test suites from running ruby
480 # programs (for example, the Workbench test suite could not
481 # boot an API server or run arv). Instead, we have to make an
482 # rvm gemset and use it for everything.
484 [[ `type rvm | head -n1` == "rvm is a function" ]] \
487 # Put rvm's favorite path back in first place (overriding
488 # virtualenv, which just put itself there). Ignore rvm's
489 # complaint about not being in first place already.
490 rvm use @default 2>/dev/null
492 # Create (if needed) and switch to an @arvados-tests-* gemset,
493 # salting the gemset name so it doesn't interfere with
494 # concurrent builds in other workspaces. Leave the choice of
495 # ruby to the caller.
496 gemset="arvados-tests-$(echo -n "${WORKSPACE}" | md5sum | head -c16)"
497 rvm use "@${gemset}" --create \
498 || fatal 'rvm gemset setup'
502 # When our "bundle install"s need to install new gems to
503 # satisfy dependencies, we want them to go where "gem install
504 # --user-install" would put them. (However, if the caller has
505 # already set GEM_HOME, we assume that's where dependencies
506 # should be installed, and we should leave it alone.)
508 if [ -z "$GEM_HOME" ]; then
509 user_gempath="$(gem env gempath)"
510 export GEM_HOME="${user_gempath%%:*}"
512 PATH="$(gem env gemdir)/bin:$PATH"
514 # When we build and install our own gems, we install them in our
515 # $GEMHOME tmpdir, and we want them to be at the front of GEM_PATH and
516 # PATH so integration tests prefer them over other versions that
517 # happen to be installed in $user_gempath, system dirs, etc.
519 tmpdir_gem_home="$(env - PATH="$PATH" HOME="$GEMHOME" gem env gempath | cut -f1 -d:)"
520 PATH="$tmpdir_gem_home/bin:$PATH"
521 export GEM_PATH="$tmpdir_gem_home"
523 echo "Will install dependencies to $(gem env gemdir)"
524 echo "Will install arvados gems to $tmpdir_gem_home"
525 echo "Gem search path is GEM_PATH=$GEM_PATH"
527 bundle config || gem install bundler \
528 || fatal 'install bundler'
532 if [[ "$using_rvm" == true ]]; then
535 GEM_HOME="$tmpdir_gem_home" GEM_PATH="$tmpdir_gem_home" "$@"
539 gem_uninstall_if_exists() {
540 if gem list "$1\$" | egrep '^\w'; then
541 gem uninstall --force --all --executables "$1"
546 local venvdest="$1"; shift
547 if ! [[ -e "$venvdest/bin/activate" ]] || ! [[ -e "$venvdest/bin/pip" ]]; then
548 virtualenv --setuptools "$@" "$venvdest" || fatal "virtualenv $venvdest failed"
549 elif [[ -n "$short" ]]; then
552 if [[ $("$venvdest/bin/python" --version 2>&1) =~ \ 3\.[012]\. ]]; then
553 # pip 8.0.0 dropped support for python 3.2, e.g., debian wheezy
554 "$venvdest/bin/pip" install --no-cache-dir 'setuptools>=18.5' 'pip>=7,<8'
556 "$venvdest/bin/pip" install --no-cache-dir 'setuptools>=18.5' 'pip>=7'
558 # ubuntu1404 can't seem to install mock via tests_require, but it can do this.
559 "$venvdest/bin/pip" install --no-cache-dir 'mock>=1.0' 'pbr<1.7.0'
565 echo "WORKSPACE=$WORKSPACE"
567 if [[ -z "$CONFIGSRC" ]] && [[ -d "$HOME/arvados-api-server" ]]; then
568 # Jenkins expects us to use this by default.
569 CONFIGSRC="$HOME/arvados-api-server"
572 # Clean up .pyc files that may exist in the workspace
574 find -name '*.pyc' -delete
576 if [[ -z "$temp" ]]; then
580 # Set up temporary install dirs (unless existing dirs were supplied)
581 for tmpdir in VENVDIR VENV3DIR GOPATH GEMHOME PERLINSTALLBASE R_LIBS
583 if [[ -z "${!tmpdir}" ]]; then
584 eval "$tmpdir"="$temp/$tmpdir"
586 if ! [[ -d "${!tmpdir}" ]]; then
587 mkdir "${!tmpdir}" || fatal "can't create ${!tmpdir} (does $temp exist?)"
591 rm -vf "${WORKSPACE}/tmp/*.log"
593 export PERLINSTALLBASE
594 export PERL5LIB="$PERLINSTALLBASE/lib/perl5${PERL5LIB:+:$PERL5LIB}"
600 # Jenkins config requires that glob tmp/*.log match something. Ensure
601 # that happens even if we don't end up running services that set up
603 mkdir -p "${WORKSPACE}/tmp/" || fatal "could not mkdir ${WORKSPACE}/tmp"
604 touch "${WORKSPACE}/tmp/controller.log" || fatal "could not touch ${WORKSPACE}/tmp/controller.log"
606 unset http_proxy https_proxy no_proxy
609 # Note: this must be the last time we change PATH, otherwise rvm will
611 setup_ruby_environment
619 mkdir -p "$GOPATH/src/git.curoverse.com"
620 if [[ ! -h "$GOPATH/src/git.curoverse.com/arvados.git" ]]; then
622 "$GOPATH/src/git.curoverse.com/arvados.git/tmp/GOPATH" \
623 "$GOPATH/src/git.curoverse.com/arvados.git/tmp" \
624 "$GOPATH/src/git.curoverse.com/arvados.git"; do
625 [[ -d "$d" ]] && rmdir "$d"
629 "$GOPATH/src/git.curoverse.com/arvados.git/arvados" \
630 "$GOPATH/src/git.curoverse.com/arvados.git"; do
631 [[ -h "$d" ]] && rm "$d"
633 ln -vsfT "$WORKSPACE" "$GOPATH/src/git.curoverse.com/arvados.git"
634 go get -v github.com/kardianos/govendor
635 cd "$GOPATH/src/git.curoverse.com/arvados.git"
636 if [[ -n "$short" ]]; then
638 "$GOPATH/bin/govendor" sync
640 # Remove cached source dirs in workdir. Otherwise, they will
641 # not qualify as +missing or +external below, and we won't be
642 # able to detect that they're missing from vendor/vendor.json.
645 "$GOPATH/bin/govendor" sync
646 [[ -z $("$GOPATH/bin/govendor" list +unused +missing +external | tee /dev/stderr) ]] \
647 || fatal "vendor/vendor.json has unused or missing dependencies -- try:
649 (export GOPATH=\"${GOPATH}\"; cd \$GOPATH/src/git.curoverse.com/arvados.git && \$GOPATH/bin/govendor add +missing +external && \$GOPATH/bin/govendor remove +unused)
653 ) || fatal "Go setup failed"
655 setup_virtualenv "$VENVDIR" --python python2.7
656 . "$VENVDIR/bin/activate"
658 # Needed for run_test_server.py which is used by certain (non-Python) tests.
659 pip install --no-cache-dir PyYAML \
660 || fatal "pip install PyYAML failed"
662 # Preinstall libcloud if using a fork; otherwise nodemanager "pip
663 # install" won't pick it up by default.
664 if [[ -n "$LIBCLOUD_PIN_SRC" ]]; then
665 pip freeze 2>/dev/null | egrep ^apache-libcloud==$LIBCLOUD_PIN \
666 || pip install --pre --ignore-installed --no-cache-dir "$LIBCLOUD_PIN_SRC" >/dev/null \
667 || fatal "pip install apache-libcloud failed"
670 # Deactivate Python 2 virtualenv
673 # If Python 3 is available, set up its virtualenv in $VENV3DIR.
674 # Otherwise, skip dependent tests.
675 PYTHON3=$(which python3)
676 if [[ ${?} = 0 ]]; then
677 setup_virtualenv "$VENV3DIR" --python python3
682 Warning: python3 could not be found. Python 3 tests will be skipped.
687 if ! which bundler >/dev/null
689 gem install --user-install bundler || fatal 'Could not install bundler'
698 if [[ "$remain" -gt 1 ]]; then
699 remain=$((${remain}-1))
700 title "(repeating ${remain} more times)"
704 elif [[ "$retry" == 1 ]]; then
705 read -p 'Try again? [Y/n] ' x
706 if [[ "$x" != "y" ]] && [[ "$x" != "" ]]
718 apps/workbench_units | apps/workbench_functionals | apps/workbench_integration)
721 services/nodemanager | services/nodemanager_integration)
722 suite=services/nodemanager_suite
728 if [[ -n "${skip[$suite]}" || \
729 -n "${skip[$1]}" || \
730 (${#only[@]} -ne 0 && ${only[$suite]} -eq 0 && ${only[$1]} -eq 0) ]]; then
737 gofmt | doc | lib/cli | lib/cloud/azure | lib/cloud/ec2 | lib/cmd | lib/dispatchcloud/ssh_executor | lib/dispatchcloud/worker)
738 # don't care whether services are running
741 if ! start_services; then
742 title "test $1 -- failed to start services"
747 retry do_test_once ${@}
756 if which deactivate >/dev/null; then deactivate; fi
757 if ! . "$VENVDIR/bin/activate"
760 elif [[ "$2" == "go" ]]
762 covername="coverage-$(echo "$1" | sed -e 's/\//_/g')"
763 coverflags=("-covermode=count" "-coverprofile=$WORKSPACE/tmp/.$covername.tmp")
764 # We do "go get -t" here to catch compilation errors
765 # before trying "go test". Otherwise, coverage-reporting
766 # mode makes Go show the wrong line numbers when reporting
767 # compilation errors.
768 go get -ldflags "-X main.version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}" -t "git.curoverse.com/arvados.git/$1" && \
769 cd "$GOPATH/src/git.curoverse.com/arvados.git/$1" && \
770 if [[ -n "${testargs[$1]}" ]]
772 # "go test -check.vv giturl" doesn't work, but this
774 go test ${short:+-short} ${testargs[$1]}
776 # The above form gets verbose even when testargs is
777 # empty, so use this form in such cases:
778 go test ${short:+-short} ${coverflags[@]} "git.curoverse.com/arvados.git/$1"
781 if [[ -f "$WORKSPACE/tmp/.$covername.tmp" ]]
783 go tool cover -html="$WORKSPACE/tmp/.$covername.tmp" -o "$WORKSPACE/tmp/$covername.html"
784 rm "$WORKSPACE/tmp/.$covername.tmp"
786 [[ $result = 0 ]] && gofmt -e -d *.go
787 elif [[ "$2" == "pip" ]]
790 cd "$WORKSPACE/$1" && while :
792 tries=$((${tries}+1))
793 # $3 can name a path directory for us to use, including trailing
794 # slash; e.g., the bin/ subdirectory of a virtualenv.
795 "${3}python" setup.py ${short:+--short-tests-only} test ${testargs[$1]}
797 if [[ ${tries} < 3 && ${result} == 137 ]]
799 printf '\n*****\n%s tests killed -- retrying\n*****\n\n' "$1"
805 elif [[ "$2" != "" ]]
812 checkexit $result "$1 tests"
813 title "test $1 -- `timer`"
818 if [[ -n "${skip[install]}" || ( -n "${only_install}" && "${only_install}" != "${1}" && "${only_install}" != "${2}" ) ]]; then
821 retry do_install_once ${@}
828 if which deactivate >/dev/null; then deactivate; fi
829 if [[ "$1" != "env" ]] && ! . "$VENVDIR/bin/activate"; then
831 elif [[ "$2" == "go" ]]
833 go get -ldflags "-X main.version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}" -t "git.curoverse.com/arvados.git/$1"
834 elif [[ "$2" == "pip" ]]
836 # $3 can name a path directory for us to use, including trailing
837 # slash; e.g., the bin/ subdirectory of a virtualenv.
839 # Need to change to a different directory after creating
840 # the source dist package to avoid a pip bug.
841 # see https://arvados.org/issues/5766 for details.
843 # Also need to install twice, because if it believes the package is
844 # already installed, pip it won't install it. So the first "pip
845 # install" ensures that the dependencies are met, the second "pip
846 # install" ensures that we've actually installed the local package
849 && "${3}python" setup.py sdist rotate --keep=1 --match .tar.gz \
851 && "${3}pip" install --no-cache-dir --quiet "$WORKSPACE/$1/dist"/*.tar.gz \
852 && "${3}pip" install --no-cache-dir --quiet --no-deps --ignore-installed "$WORKSPACE/$1/dist"/*.tar.gz
853 elif [[ "$2" != "" ]]
860 checkexit $result "$1 install"
861 title "install $1 -- `timer`"
865 bundle_install_trylocal() {
868 echo "(Running bundle install --local. 'could not find package' messages are OK.)"
869 if ! bundle install --local --no-deployment; then
870 echo "(Running bundle install again, without --local.)"
871 bundle install --no-deployment
878 cd "$WORKSPACE/doc" \
879 && bundle_install_trylocal \
886 with_test_gemset gem_uninstall_if_exists "$gemname" \
887 && cd "$WORKSPACE/$srcpath" \
888 && bundle_install_trylocal \
889 && gem build "$gemname.gemspec" \
890 && with_test_gemset gem install --no-ri --no-rdoc $(ls -t "$gemname"-*.gem|head -n1)
894 install_gem arvados sdk/ruby
898 if [[ "$NEED_SDK_R" = true ]]; then
899 cd "$WORKSPACE/sdk/R" \
900 && Rscript --vanilla install_deps.R
905 cd "$WORKSPACE/sdk/perl" \
906 && perl Makefile.PL INSTALL_BASE="$PERLINSTALLBASE" \
907 && make install INSTALLDIRS=perl
911 install_gem arvados-cli sdk/cli
914 install_services/login-sync() {
915 install_gem arvados-login-sync services/login-sync
918 install_services/api() {
919 cd "$WORKSPACE/services/api" \
920 && RAILS_ENV=test bundle_install_trylocal
922 rm -f config/environments/test.rb
923 cp config/environments/test.rb.example config/environments/test.rb
925 if [ -n "$CONFIGSRC" ]
927 for f in database.yml
929 cp "$CONFIGSRC/$f" config/ || fatal "$f"
933 # Clear out any lingering postgresql connections to the test
934 # database, so that we can drop it. This assumes the current user
935 # is a postgresql superuser.
936 cd "$WORKSPACE/services/api" \
937 && test_database=$(python -c "import yaml; print yaml.safe_load(file('config/database.yml'))['test']['database']") \
938 && psql "$test_database" -c "SELECT pg_terminate_backend (pg_stat_activity.pid::int) FROM pg_stat_activity WHERE pg_stat_activity.datname = '$test_database';" 2>/dev/null
940 mkdir -p "$WORKSPACE/services/api/tmp/pids"
942 cert="$WORKSPACE/services/api/tmp/self-signed"
943 if [[ ! -e "$cert.pem" || "$(date -r "$cert.pem" +%s)" -lt 1512659226 ]]; then
945 dir="$WORKSPACE/services/api/tmp"
947 openssl req -newkey rsa:2048 -nodes -subj '/C=US/ST=State/L=City/CN=localhost' -out "$cert.csr" -keyout "$cert.key" </dev/null
948 openssl x509 -req -in "$cert.csr" -signkey "$cert.key" -out "$cert.pem" -days 3650 -extfile <(printf 'subjectAltName=DNS:localhost,DNS:::1,DNS:0.0.0.0,DNS:127.0.0.1,IP:::1,IP:0.0.0.0,IP:127.0.0.1')
952 cd "$WORKSPACE/services/api" \
954 && mkdir -p tmp/git \
956 && tar xf ../../test/test.git.tar \
957 && mkdir -p internal.git \
958 && git --git-dir internal.git init \
961 cd "$WORKSPACE/services/api" \
962 && RAILS_ENV=test bundle exec rake db:drop \
963 && RAILS_ENV=test bundle exec rake db:setup \
964 && RAILS_ENV=test bundle exec rake db:fixtures:load
967 declare -a pythonstuff
974 services/dockercleaner:py3
977 tools/crunchstat-summary
992 lib/dispatchcloud/container
993 lib/dispatchcloud/scheduler
994 lib/dispatchcloud/ssh_executor
995 lib/dispatchcloud/worker
1008 services/arv-git-httpd
1014 services/keep-balance
1016 services/crunch-dispatch-local
1017 services/crunch-dispatch-slurm
1020 tools/keep-block-check
1026 install_apps/workbench() {
1027 cd "$WORKSPACE/apps/workbench" \
1028 && mkdir -p tmp/cache \
1029 && RAILS_ENV=test bundle_install_trylocal \
1030 && RAILS_ENV=test RAILS_GROUPS=assets bundle exec rake npm:install
1037 ARVADOS_API_HOST=qr1hi.arvadosapi.com
1038 # Make sure python-epydoc is installed or the next line won't
1040 PYTHONPATH=$WORKSPACE/sdk/python/ bundle exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
1045 cd "$WORKSPACE" || return 1
1046 dirs=$(ls -d */ | egrep -v 'vendor|tmp')
1047 [[ -z "$(gofmt -e -d $dirs | tee -a /dev/stderr)" ]]
1050 test_services/api() {
1051 rm -f "$WORKSPACE/services/api/git-commit.version"
1052 cd "$WORKSPACE/services/api" \
1053 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test TESTOPTS=-v ${testargs[services/api]}
1057 cd "$WORKSPACE/sdk/ruby" \
1058 && bundle exec rake test TESTOPTS=-v ${testargs[sdk/ruby]}
1062 if [[ "$NEED_SDK_R" = true ]]; then
1063 cd "$WORKSPACE/sdk/R" \
1064 && Rscript --vanilla run_test.R
1069 cd "$WORKSPACE/sdk/cli" \
1070 && mkdir -p /tmp/keep \
1071 && KEEP_LOCAL_STORE=/tmp/keep bundle exec rake test TESTOPTS=-v ${testargs[sdk/cli]}
1074 test_services/login-sync() {
1075 cd "$WORKSPACE/services/login-sync" \
1076 && bundle exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
1079 test_services/nodemanager_integration() {
1080 cd "$WORKSPACE/services/nodemanager" \
1081 && tests/integration_test.py ${testargs[services/nodemanager_integration]}
1084 test_apps/workbench_units() {
1085 cd "$WORKSPACE/apps/workbench" \
1086 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:units TESTOPTS=-v ${testargs[apps/workbench]} ${testargs[apps/workbench_units]}
1089 test_apps/workbench_functionals() {
1090 cd "$WORKSPACE/apps/workbench" \
1091 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:functionals TESTOPTS=-v ${testargs[apps/workbench]} ${testargs[apps/workbench_functionals]}
1094 test_apps/workbench_integration() {
1095 cd "$WORKSPACE/apps/workbench" \
1096 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:integration TESTOPTS=-v ${testargs[apps/workbench]} ${testargs[apps/workbench_integration]}
1099 test_apps/workbench_benchmark() {
1100 cd "$WORKSPACE/apps/workbench" \
1101 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:benchmark ${testargs[apps/workbench_benchmark]}
1104 test_apps/workbench_profile() {
1105 cd "$WORKSPACE/apps/workbench" \
1106 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:profile ${testargs[apps/workbench_profile]}
1110 # Install parts needed by test suites
1112 do_install cmd/arvados-server go
1115 do_install sdk/python pip
1117 do_install services/api
1118 do_install services/arv-git-httpd go
1119 do_install services/keepproxy go
1120 do_install services/keepstore go
1121 do_install services/keep-web go
1122 do_install services/ws go
1132 do_install services/login-sync
1133 for p in "${pythonstuff[@]}"
1136 if [[ ${dir} = ${p} ]]; then
1137 if [[ -z ${skip[python2]} ]]; then
1138 do_install ${dir} pip
1140 elif [[ -n ${PYTHON3} ]]; then
1141 if [[ -z ${skip[python3]} ]]; then
1142 do_install ${dir} pip "$VENV3DIR/bin/"
1146 do_install services/api
1147 for g in "${gostuff[@]}"
1151 do_install apps/workbench
1156 do_test services/api
1158 # Shortcut for when we're only running apiserver tests. This saves a bit of time,
1159 # because we don't need to start up the api server for subsequent tests.
1160 if [ ! -z "$only" ] && [ "$only" == "services/api" ]; then
1161 rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
1170 do_test services/login-sync
1171 do_test services/nodemanager_integration
1172 for p in "${pythonstuff[@]}"
1175 if [[ ${dir} = ${p} ]]; then
1176 if [[ -z ${skip[python2]} ]]; then
1179 elif [[ -n ${PYTHON3} ]]; then
1180 if [[ -z ${skip[python3]} ]]; then
1181 do_test ${dir} pip "$VENV3DIR/bin/"
1186 for g in "${gostuff[@]}"
1190 do_test apps/workbench_units
1191 do_test apps/workbench_functionals
1192 do_test apps/workbench_integration
1193 do_test apps/workbench_benchmark
1194 do_test apps/workbench_profile
1197 help_interactive() {
1198 echo "== Interactive commands:"
1199 echo "TARGET (short for 'test DIR')"
1201 echo "test TARGET:py3 (test with python3)"
1202 echo "test TARGET -check.vv (pass arguments to test)"
1203 echo "install TARGET"
1204 echo "install env (go/python libs)"
1205 echo "install deps (go/python libs + arvados components needed for integration tests)"
1206 echo "reset (...services used by integration tests)"
1208 echo "== Test targets:"
1209 echo "${!testfuncargs[@]}" | tr ' ' '\n' | sort | column
1214 declare -A testfuncargs=()
1215 for g in "${gostuff[@]}"; do
1216 testfuncargs[$g]="$g go"
1218 for p in "${pythonstuff[@]}"; do
1220 testfuncargs[$dir]="$dir pip $VENVDIR/bin/"
1221 testfuncargs[$dir:py3]="$dir pip $VENV3DIR/bin/"
1224 if [[ -z ${interactive} ]]; then
1231 if [[ -e "$VENVDIR/bin/activate" ]]; then stop_services; fi
1233 if [[ "$TERM" = dumb ]]; then
1234 # assume emacs, or something, is offering a history buffer
1235 # and pre-populating the command will only cause trouble
1237 elif [[ "$nextcmd" != "install deps" ]]; then
1239 elif [[ -e "$VENVDIR/bin/activate" ]]; then
1240 nextcmd="test lib/cmd"
1242 nextcmd="install deps"
1247 nextcmd="install deps"
1249 while read -p 'What next? ' -e -i "${nextcmd}" nextcmd; do
1250 read verb target opts <<<"${nextcmd}"
1251 target="${target%/}"
1252 target="${target/\/:/:}"
1269 testargs["$target"]="${opts}"
1270 tt="${testfuncargs[${target}]}"
1280 if [[ ${#successes[@]} -gt 0 || ${#failures[@]} -gt 0 ]]; then