sdk/cwl/tests/wf/runseparate-wf.cwl

   1 # Copyright (C) The Arvados Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: Apache-2.0
   4
   5 class: Workflow
   6 cwlVersion: v1.0
   7 $namespaces:
   8   arv: "http://arvados.org/cwl#"
   9 inputs:
  10   sleeptime:
  11     type: int
  12     default: 5
  13   fileblub:
  14     type: File
  15     default:
  16       class: File
  17       location: keep:d7514270f356df848477718d58308cc4+94/a
  18       secondaryFiles:
  19         - class: File
  20           location: keep:d7514270f356df848477718d58308cc4+94/b
  21 outputs:
  22   out:
  23     type: string
  24     outputSource: substep/out
  25 requirements:
  26   SubworkflowFeatureRequirement: {}
  27   ScatterFeatureRequirement: {}
  28   InlineJavascriptRequirement: {}
  29   StepInputExpressionRequirement: {}
  30 steps:
  31   substep:
  32     in:
  33       sleeptime: sleeptime
  34       fileblub: fileblub
  35     out: [out]
  36     hints:
  37       - class: arv:SeparateRunner
  38         runnerProcessName: $("sleeptime "+inputs.sleeptime)
  39       - class: DockerRequirement
  40         dockerPull: arvados/jobs:2.2.2
  41     run:
  42       class: Workflow
  43       id: mysub
  44       inputs:
  45         fileblub: File
  46         sleeptime: int
  47       outputs:
  48         out:
  49           type: string
  50           outputSource: sleep1/out
  51       steps:
  52         sleep1:
  53           in:
  54             fileblub: fileblub
  55           out: [out]
  56           run:
  57             class: CommandLineTool
  58             id: subtool
  59             inputs:
  60               fileblub:
  61                 type: File
  62                 inputBinding: {position: 1}
  63             outputs:
  64               out:
  65                 type: string
  66                 outputBinding:
  67                   outputEval: 'out'
  68             baseCommand: cat