apps/workbench/app/views/work_units/_component_detail.html.erb

   1 <%# Copyright (C) The Arvados Authors. All rights reserved.
   2
   3 SPDX-License-Identifier: AGPL-3.0 %>
   4
   5 <%
   6   collections = [current_obj.outputs, current_obj.docker_image].flatten.compact.uniq
   7   collections_pdhs = collections.select {|x| !CollectionsHelper.match(x).nil?}.uniq.compact
   8   collections_uuids = collections - collections_pdhs
   9   preload_collections_for_objects collections_uuids if collections_uuids.any?
  10   preload_links_for_objects collections_uuids if collections_uuids.any?
  11
  12   preload_objects_for_dataclass(Repository, [current_obj.repository], :name) if current_obj.repository
  13
  14   # if container_X, preload mounted collections
  15   if @object.is_a? Container or @object.is_a? ContainerRequest
  16     # get any collections in mounts
  17     mounts = current_obj.send(:mounts) if current_obj.respond_to?(:mounts)
  18     input_obj = mounts.andand[:"/var/lib/cwl/cwl.input.json"].andand[:content]
  19     if input_obj
  20       input_obj.to_s.scan(/([0-9a-f]{32}\+\d+)/).each {|cs| collections_pdhs += cs}
  21     end
  22
  23     command = current_obj.send(:command) if current_obj.respond_to?(:command)
  24     if command
  25       command.to_s.scan(/([0-9a-f]{32}\+\d+)/).each {|cs| collections_pdhs += cs}
  26     end
  27   end
  28
  29   collections_pdhs.compact.uniq
  30   preload_for_pdhs collections_pdhs if collections_pdhs.any?
  31   preload_links_for_objects collections_pdhs if collections_pdhs.any?
  32 %>
  33
  34       <div class="container">
  35         <div class="row">
  36           <div class="col-md-6" style="overflow-x: auto">
  37             <% if current_obj.uuid.nil? %>
  38               No <%= current_obj.title %> has been submitted yet.
  39             <% else %>
  40             <table class="table table-condensed">
  41               <% keys = [:uuid, :modified_by_user_uuid, :created_at, :started_at, :finished_at, :container_uuid] %>
  42               <% keys << :log_collection if @object.uuid != current_obj.uuid %>
  43               <% keys << :outputs %>
  44               <% keys.each do |k| %>
  45                 <%
  46                   val = current_obj.send(k) if current_obj.respond_to?(k)
  47                   if k == :outputs
  48                     has_val = val.andand.any?
  49                   elsif k == :log_collection and current_obj.state_label == "Running"
  50                     has_val = true
  51                   else
  52                     has_val = val
  53                   end
  54                 %>
  55                 <% if has_val %>
  56                 <tr>
  57                   <td style="padding-right: 1em">
  58                     <%= k.to_s %>:
  59                   </td>
  60                   <td>
  61                     <% if k == :uuid %>
  62                       <%= link_to_arvados_object_if_readable(val, val, link_text: val) %>
  63                     <% elsif k.to_s.end_with? 'uuid' %>
  64                       <%= link_to_arvados_object_if_readable(val, val, friendly_name: true) %>
  65                     <% elsif k.to_s.end_with? '_at' %>
  66                       <%= render_localized_date(val) %>
  67                     <% elsif k == :outputs and val.any? %>
  68                       <% if val.size == 1 %>
  69                         <%= link_to_arvados_object_if_readable(val[0], 'Output data not available', friendly_name: true) %>
  70                       <% else %>
  71                         <%= render partial: 'work_units/show_outputs', locals: {id: current_obj.uuid, outputs: val, align:""} %>
  72                       <% end %>
  73                     <% elsif k == :log_collection %>
  74                       <%= render partial: 'work_units/show_log_link', locals: {wu: current_obj} %>
  75                     <% else %>
  76                       <%= val %>
  77                     <% end %>
  78                   </td>
  79                 </tr>
  80                 <% end %>
  81               <% end %>
  82             </table>
  83             <% end %>
  84           </div>
  85           <div class="col-md-6">
  86             <table class="table table-condensed">
  87               <% # link to repo tree/file only if the repo is readable and the commit is a sha1
  88                  repo = (/^[0-9a-f]{40}$/ =~ current_obj.script_version and
  89                          current_obj.repository and
  90                          object_for_dataclass(Repository, current_obj.repository, :name))
  91                  repo = nil unless repo.andand.http_fetch_url
  92                  %>
  93               <% [:script, :repository, :script_version, :supplied_script_version, :nondeterministic,
  94                   :priority, :runtime_constraints, :requesting_container_uuid].each do |k| %>
  95                 <% val = current_obj.send(k) if current_obj.respond_to?(k) %>
  96                 <% if val %>
  97                 <tr valign="top">
  98                   <td style="padding-right: 1em">
  99                     <%= k.to_s %>:
 100                   </td>
 101                   <td>
 102                     <% if repo and k == :repository %>
 103                       <%= link_to val, show_repository_tree_path(id: repo.uuid, commit: current_obj.script_version, path: '/') %>
 104                     <% elsif repo and k == :script %>
 105                       <%= link_to val, show_repository_blob_path(id: repo.uuid, commit: current_obj.script_version, path: 'crunch_scripts/'+current_obj.script) %>
 106                     <% elsif repo and k == :script_version %>
 107                       <%= link_to val, show_repository_commit_path(id: repo.uuid, commit: current_obj.script_version) %>
 108                     <% elsif k == :runtime_constraints and val.any? %>
 109                       <%= render partial: 'work_units/show_table_data', locals: {id: current_obj.uuid, name: k, data_map: val} %>
 110                     <% elsif k.to_s.end_with? 'uuid' %>
 111                       <%= link_to_arvados_object_if_readable(val, val, friendly_name: true) %>
 112                     <% else %>
 113                       <%= val %>
 114                     <% end %>
 115                   </td>
 116                 </tr>
 117                 <% end %>
 118               <% end %>
 119
 120               <%
 121                 mounts = current_obj.send(:mounts) if current_obj.respond_to?(:mounts)
 122                 mount_wf = mounts.andand[:"/var/lib/cwl/workflow.json"]
 123                 mount_wf = mount_wf[5..-1] if mount_wf.andand.is_a?(String) and mount_wf.start_with?('keep:')
 124                 mount_wf_cls = resource_class_for_uuid(mount_wf) if mount_wf
 125               %>
 126               <tr>
 127                 <% if mount_wf_cls == Collection %>
 128                   <td style="padding-right: 1em">
 129                     workflow.json:
 130                   </td>
 131                   <td>
 132                     <%= link_to_if_arvados_object mount_wf, friendly_name: true %>
 133                   </td>
 134                 <% end %>
 135               </tr>
 136
 137               <% if current_obj.runtime_constraints.andand[:docker_image] and current_obj.docker_image %>
 138                 <tr>
 139                   <td style="padding-right: 1em">
 140                     docker_image:
 141                   </td>
 142                   <td>
 143                     <%= current_obj.runtime_constraints[:docker_image] %>
 144                   </td>
 145                 </tr>
 146                 <tr>
 147                   <td style="padding-right: 1em">
 148                     docker_image_locator:
 149                   </td>
 150                   <td>
 151                     <%= link_to_arvados_object_if_readable(current_obj.docker_image,
 152                       current_obj.docker_image, friendly_name: true) %>
 153                   </td>
 154                 </tr>
 155               <% elsif current_obj.docker_image %>
 156                 <tr>
 157                   <td style="padding-right: 1em">
 158                     docker_image_locator:
 159                   </td>
 160                   <td>
 161                     <%= link_to_arvados_object_if_readable(current_obj.docker_image,
 162                       current_obj.docker_image, friendly_name: true) %>
 163                   </td>
 164                 </tr>
 165               <% end %>
 166             </table>
 167           </div>
 168
 169           <div class="col-md-12">
 170             <table class="table table-condensed" style="table-layout:fixed;">
 171               <col width="15%" />
 172               <col width="85%" />
 173               <% [:command].each do |k| %>
 174                 <% val = current_obj.send(k) if current_obj.respond_to?(k) %>
 175                 <% if val %>
 176                 <tr>
 177                   <td valign="top">
 178                     <%= k.to_s %>:
 179                   </td>
 180                   <td style="word-wrap: break-all;">
 181                     <% if k == :command %>
 182                         <% val = JSON.pretty_generate(val) %>
 183                         <%= render partial: 'show_text_with_locators', locals: {data_height: 200, text_data: val} %>
 184                     <% else %>
 185                       <%= val %>
 186                     <% end %>
 187                   </td>
 188                 </tr>
 189                 <% end %>
 190               <% end %>
 191
 192               <%
 193                 mounts = current_obj.send(:mounts) if current_obj.respond_to?(:mounts)
 194                 input_obj = mounts.andand[:"/var/lib/cwl/cwl.input.json"].andand[:content]
 195                 mnt_inputs = JSON.pretty_generate(input_obj) if input_obj
 196               %>
 197               <% if mnt_inputs %>
 198                 <tr>
 199                   <td valign="top">
 200                     cwl.input.json:
 201                   </td>
 202                   <td style="word-wrap: break-all;">
 203                     <%= render partial: 'show_text_with_locators', locals: {data_height: 400, text_data: mnt_inputs} %>
 204                   </td>
 205                 </tr>
 206               <% end %>
 207             </table>
 208           </div>
 209
 210         </div>
 211
 212         <% if current_obj.parameters and !current_obj.parameters.empty? %>
 213         <div class="row">
 214           <div class="col-md-12">
 215             <p>script_parameters:</p>
 216             <pre><%= JSON.pretty_generate(current_obj.parameters) rescue nil %></pre>
 217           </div>
 218         </div>
 219         <% end %>
 220       </div>