sdk/cwl/tests/19109-upload-secondary.cwl

   1 # Copyright (C) The Arvados Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: Apache-2.0
   4
   5 cwlVersion: v1.2
   6 class: Workflow
   7
   8 requirements:
   9   InlineJavascriptRequirement: {}
  10
  11 inputs:
  12   file1:
  13     type: File?
  14     secondaryFiles:
  15       - pattern: .tbi
  16         required: true
  17   file2:
  18     type: File
  19     secondaryFiles:
  20       - pattern: |
  21           ${
  22           return self.basename + '.tbi';
  23           }
  24         required: true
  25 outputs:
  26   out:
  27     type: File
  28     outputSource: cat/out
  29   out2:
  30     type: File
  31     outputSource: cat2/out
  32 steps:
  33   cat:
  34     in:
  35       inp: file1
  36     run: cat2.cwl
  37     out: [out]
  38   cat2:
  39     in:
  40       inp: file2
  41     run: cat2.cwl
  42     out: [out]