sdk/cwl/tests/federation/framework/prepare.cwl

   1 # Copyright (C) The Arvados Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: Apache-2.0
   4
   5 cwlVersion: v1.0
   6 class: CommandLineTool
   7 requirements:
   8   InitialWorkDirRequirement:
   9     listing:
  10       - entryname: input.json
  11         entry: $(JSON.stringify(inputs.obj))
  12       - entryname: config.json
  13         entry: |-
  14           ${
  15           return JSON.stringify({
  16             arvados_cluster_ids: inputs.arvados_cluster_ids,
  17             scrub_images: [inputs.scrub_image],
  18             scrub_collections: inputs.scrub_collections
  19           });
  20           }
  21   EnvVarRequirement:
  22     envDef:
  23       ARVADOS_API_HOST: $(inputs.arvados_api_host)
  24       ARVADOS_API_TOKEN: $(inputs.arvados_api_token)
  25       ARVADOS_API_HOST_INSECURE: $(""+inputs.arvado_api_host_insecure)
  26   InlineJavascriptRequirement: {}
  27 hints:
  28   DockerRequirement:
  29     dockerPull: arvados/jobs
  30 inputs:
  31   arvados_api_token: string
  32   arvado_api_host_insecure: boolean
  33   arvados_api_host: string
  34   arvados_cluster_ids: string[]
  35   wf: File
  36   obj: Any
  37   scrub_image: string
  38   scrub_collections: string[]
  39   preparescript:
  40     type: File
  41     default:
  42       class: File
  43       location: prepare.py
  44     inputBinding:
  45       position: 1
  46 outputs:
  47   done:
  48     type: boolean
  49     outputBinding:
  50       outputEval: $(true)
  51 baseCommand: python2