sdk/cwl/tests/wf/runin-wf.cwl

   1 # Copyright (C) The Arvados Authors. All rights reserved.
   2 #
   3 # SPDX-License-Identifier: Apache-2.0
   4
   5 class: Workflow
   6 cwlVersion: v1.0
   7 $namespaces:
   8   arv: "http://arvados.org/cwl#"
   9 inputs:
  10   sleeptime:
  11     type: int
  12     default: 5
  13   fileblub:
  14     type: File
  15     default:
  16       class: File
  17       location: keep:d7514270f356df848477718d58308cc4+94/a
  18       secondaryFiles:
  19         - class: File
  20           location: keep:d7514270f356df848477718d58308cc4+94/b
  21 outputs:
  22   out:
  23     type: string
  24     outputSource: substep/out
  25 requirements:
  26   SubworkflowFeatureRequirement: {}
  27   ScatterFeatureRequirement: {}
  28   InlineJavascriptRequirement: {}
  29   StepInputExpressionRequirement: {}
  30 steps:
  31   substep:
  32     in:
  33       sleeptime: sleeptime
  34       fileblub: fileblub
  35     out: [out]
  36     hints:
  37       - class: arv:RunInSingleContainer
  38       - class: DockerRequirement
  39         dockerPull: arvados/jobs:2.2.2
  40     run:
  41       class: Workflow
  42       id: mysub
  43       inputs:
  44         fileblub: File
  45       outputs:
  46         out:
  47           type: string
  48           outputSource: sleep1/out
  49       steps:
  50         sleep1:
  51           in:
  52             fileblub: fileblub
  53           out: [out]
  54           run:
  55             class: CommandLineTool
  56             id: subtool
  57             inputs:
  58               fileblub:
  59                 type: File
  60                 inputBinding: {position: 1}
  61             outputs:
  62               out:
  63                 type: string
  64                 outputBinding:
  65                   outputEval: $("out")
  66             baseCommand: cat