2 # Copyright (C) The Arvados Authors. All rights reserved.
4 # SPDX-License-Identifier: AGPL-3.0
6 . `dirname "$(readlink -f "$0")"`/libcloud-pin.sh
9 . `dirname "$(readlink -f "$0")"`/run-library.sh
11 read -rd "\000" helpmessage <<EOF
12 $(basename $0): Install and test Arvados components.
14 Exit non-zero if any tests fail.
17 $(basename $0) WORKSPACE=/path/to/arvados [options]
21 --skip FOO Do not test the FOO component.
22 --skip sanity Skip initial dev environment sanity checks.
23 --skip install Do not run any install steps. Just run tests.
24 You should provide GOPATH, GEMHOME, and VENVDIR options
25 from a previous invocation if you use this option.
26 --only FOO Do not test anything except the FOO component.
27 --temp DIR Install components and dependencies under DIR instead of
28 making a new temporary directory. Implies --leave-temp.
29 --leave-temp Do not remove GOPATH, virtualenv, and other temp dirs at exit.
30 Instead, show the path to give as --temp to reuse them in
31 subsequent invocations.
32 --repeat N Repeat each install/test step until it succeeds N times.
33 --retry Prompt to retry if an install or test suite fails.
34 --only-install Run specific install step
35 --short Skip (or scale down) some slow tests.
36 --interactive Set up, then prompt for test/install steps to perform.
37 WORKSPACE=path Arvados source tree to test.
38 CONFIGSRC=path Dir with api server config files to copy into source tree.
39 (If none given, leave config files alone in source tree.)
40 services/api_test="TEST=test/functional/arvados/v1/collections_controller_test.rb"
41 Restrict apiserver tests to the given file
42 sdk/python_test="--test-suite tests.test_keep_locator"
43 Restrict Python SDK tests to the given class
44 apps/workbench_test="TEST=test/integration/pipeline_instances_test.rb"
45 Restrict Workbench tests to the given file
46 services/arv-git-httpd_test="-check.vv"
47 Show all log messages, even when tests pass (also works
48 with services/keepstore_test etc.)
50 Print more debug messages
51 envvar=value Set \$envvar to value. Primarily useful for WORKSPACE,
52 *_test, and other examples shown above.
54 Assuming "--skip install" is not given, all components are installed
55 into \$GOPATH, \$VENDIR, and \$GEMHOME before running any tests. Many
56 test suites depend on other components being installed, and installing
57 everything tends to be quicker than debugging dependencies.
59 As a special concession to the current CI server config, CONFIGSRC
60 defaults to $HOME/arvados-api-server if that directory exists.
62 More information and background:
64 https://arvados.org/projects/arvados/wiki/Running_tests
69 apps/workbench_units (*)
70 apps/workbench_functionals (*)
71 apps/workbench_integration (*)
72 apps/workbench_benchmark
73 apps/workbench_profile
84 lib/dispatchcloud/container
85 lib/dispatchcloud/scheduler
86 lib/dispatchcloud/ssh_executor
87 lib/dispatchcloud/worker
90 services/arv-git-httpd
92 services/dockercleaner
101 services/nodemanager_integration
103 services/crunch-dispatch-local
104 services/crunch-dispatch-slurm
126 tools/crunchstat-summary
127 tools/crunchstat-summary:py3
130 tools/keep-block-check
132 (*) apps/workbench is shorthand for apps/workbench_units +
133 apps/workbench_functionals + apps/workbench_integration
137 # First make sure to remove any ARVADOS_ variables from the calling
138 # environment that could interfere with the tests.
139 unset $(env | cut -d= -f1 | grep \^ARVADOS_)
141 # Reset other variables that could affect our [tests'] behavior by
151 export LANG=en_US.UTF-8
159 if [[ -z "$temp" ]]; then
160 # we didn't even get as far as making a temp dir
162 elif [[ -z "$temp_preserve" ]]; then
165 echo "Leaving behind temp dirs in $temp"
171 echo >&2 "Fatal: $* (encountered in ${FUNCNAME[1]} at ${BASH_SOURCE[1]} line ${BASH_LINENO[0]})"
177 if which create-plot-data-from-log.sh >/dev/null; then
178 create-plot-data-from-log.sh $BUILD_NUMBER "$WORKSPACE/apps/workbench/log/test.log" "$WORKSPACE/apps/workbench/log/"
180 rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
182 rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
189 [[ -n "${skip[sanity]}" ]] && return 0
190 ( [[ -n "$WORKSPACE" ]] && [[ -d "$WORKSPACE/services" ]] ) \
191 || fatal "WORKSPACE environment variable not set to a source directory (see: $0 --help)"
192 echo Checking dependencies:
193 echo "locale: ${LANG}"
194 [[ "$(locale charmap)" = "UTF-8" ]] \
195 || fatal "Locale '${LANG}' is broken/missing. Try: echo ${LANG} | sudo tee -a /etc/locale.gen && sudo locale-gen"
196 echo -n 'virtualenv: '
197 virtualenv --version \
198 || fatal "No virtualenv. Try: apt-get install virtualenv (on ubuntu: python-virtualenv)"
201 || fatal "No ruby. Install >=2.1.9 (using rbenv, rvm, or source)"
204 || fatal "No go binary. See http://golang.org/doc/install"
205 [[ $(go version) =~ go1.([0-9]+) ]] && [[ ${BASH_REMATCH[1]} -ge 10 ]] \
206 || fatal "Go >= 1.10 required. See http://golang.org/doc/install"
208 gcc --version | egrep ^gcc \
209 || fatal "No gcc. Try: apt-get install build-essential"
211 find /usr/include -path '*fuse/fuse.h' | egrep --max-count=1 . \
212 || fatal "No fuse/fuse.h. Try: apt-get install libfuse-dev"
214 find /usr/include -path '*gnutls/gnutls.h' | egrep --max-count=1 . \
215 || fatal "No gnutls/gnutls.h. Try: apt-get install libgnutls28-dev"
216 echo -n 'Python2 pyconfig.h: '
217 find /usr/include -path '*/python2*/pyconfig.h' | egrep --max-count=1 . \
218 || fatal "No Python2 pyconfig.h. Try: apt-get install python2.7-dev"
219 echo -n 'Python3 pyconfig.h: '
220 find /usr/include -path '*/python3*/pyconfig.h' | egrep --max-count=1 . \
221 || fatal "No Python3 pyconfig.h. Try: apt-get install python3-dev"
223 PATH="$PATH:/sbin:/usr/sbin:/usr/local/sbin" nginx -v \
224 || fatal "No nginx. Try: apt-get install nginx"
226 perl -v | grep version \
227 || fatal "No perl. Try: apt-get install perl"
228 for mod in ExtUtils::MakeMaker JSON LWP Net::SSL; do
229 echo -n "perl $mod: "
230 perl -e "use $mod; print \"\$$mod::VERSION\\n\"" \
231 || fatal "No $mod. Try: apt-get install perl-modules libcrypt-ssleay-perl libjson-perl libwww-perl"
235 || fatal "No gitolite. Try: apt-get install gitolite3"
238 || fatal "No npm. Try: wget -O- https://nodejs.org/dist/v6.11.2/node-v6.11.2-linux-x64.tar.xz | sudo tar -C /usr/local -xJf - && sudo ln -s ../node-v6.11.2-linux-x64/bin/{node,npm} /usr/local/bin/"
240 cadaver --version | grep -w cadaver \
241 || fatal "No cadaver. Try: apt-get install cadaver"
242 echo -n 'libattr1 xattr.h: '
243 find /usr/include -path '*/attr/xattr.h' | egrep --max-count=1 . \
244 || fatal "No libattr1 xattr.h. Try: apt-get install libattr1-dev"
245 echo -n 'libcurl curl.h: '
246 find /usr/include -path '*/curl/curl.h' | egrep --max-count=1 . \
247 || fatal "No libcurl curl.h. Try: apt-get install libcurl4-gnutls-dev"
248 echo -n 'libpq libpq-fe.h: '
249 find /usr/include -path '*/postgresql/libpq-fe.h' | egrep --max-count=1 . \
250 || fatal "No libpq libpq-fe.h. Try: apt-get install libpq-dev"
251 echo -n 'services/api/config/database.yml: '
252 if [[ ! -f "$WORKSPACE/services/api/config/database.yml" ]]; then
253 fatal "Please provide a database.yml file for the test suite"
257 echo -n 'postgresql: '
258 psql --version || fatal "No postgresql. Try: apt-get install postgresql postgresql-client-common"
259 echo -n 'phantomjs: '
260 phantomjs --version || fatal "No phantomjs. Try: apt-get install phantomjs"
262 which Xvfb || fatal "No xvfb. Try: apt-get install xvfb"
264 dot -V || fatal "No graphviz. Try: apt-get install graphviz"
265 echo -n 'geckodriver: '
266 geckodriver --version | grep ^geckodriver || echo "No geckodriver. Try: wget -O- https://github.com/mozilla/geckodriver/releases/download/v0.23.0/geckodriver-v0.23.0-linux64.tar.gz | sudo tar -C /usr/local/bin -xzf - geckodriver"
268 if [[ "$NEED_SDK_R" = true ]]; then
271 which Rscript || fatal "No Rscript. Try: apt-get install r-base"
273 Rscript -e "library('testthat')" || fatal "No testthat. Try: apt-get install r-cran-testthat"
274 # needed for roxygen2, needed for devtools, needed for R sdk
275 pkg-config --exists libxml-2.0 || fatal "No libxml2. Try: apt-get install libxml2-dev"
276 # needed for pkgdown, builds R SDK doc pages
277 which pandoc || fatal "No pandoc. Try: apt-get install pandoc"
282 # i.e. rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
283 # $BUILD_NUMBER is set by Jenkins if this script is being called as part of a Jenkins run
284 if [[ -f "$1/$2" ]]; then
285 THEDATE=`date +%Y%m%d%H%M%S`
286 mv "$1/$2" "$1/$THEDATE-$BUILD_NUMBER-$2"
287 gzip "$1/$THEDATE-$BUILD_NUMBER-$2"
295 skip[apps/workbench_profile]=1
296 # nodemanager_integration tests are not reliable, see #12061.
297 skip[services/nodemanager_integration]=1
304 echo >&2 "$helpmessage"
312 only[$1]=1; skip[$1]=""; shift
324 only_install="$1"; shift
334 repeat=$((${1}+0)); shift
340 suite="${arg%%_test=*}"
342 testargs["$suite"]="$args"
345 eval export $(echo $arg | cut -d= -f1)=\"$(echo $arg | cut -d= -f2-)\"
348 echo >&2 "$0: Unrecognized option: '$arg'. Try: $0 --help"
354 # R SDK installation is very slow (~360s in a clean environment) and only
355 # required when testing it. Skip that step if it is not needed.
358 if [[ ${#only[@]} -ne 0 ]] &&
359 [[ -z "${only['sdk/R']}" && -z "${only['doc']}" ]]; then
363 if [[ ${skip["sdk/R"]} == 1 && ${skip["doc"]} == 1 ]]; then
367 if [[ $NEED_SDK_R == false ]]; then
368 echo "R SDK not needed, it will not be installed."
372 if [[ -n "$ARVADOS_TEST_API_HOST" ]]; then
375 . "$VENVDIR/bin/activate"
376 echo 'Starting API, keepproxy, keep-web, ws, arv-git-httpd, and nginx ssl proxy...'
377 if [[ ! -d "$WORKSPACE/services/api/log" ]]; then
378 mkdir -p "$WORKSPACE/services/api/log"
380 # Remove empty api.pid file if it exists
381 if [[ -f "$WORKSPACE/tmp/api.pid" && ! -s "$WORKSPACE/tmp/api.pid" ]]; then
382 rm -f "$WORKSPACE/tmp/api.pid"
384 all_services_stopped=
387 && eval $(python sdk/python/tests/run_test_server.py start --auth admin || echo "fail=1; false") \
388 && export ARVADOS_TEST_API_HOST="$ARVADOS_API_HOST" \
389 && export ARVADOS_TEST_API_INSTALLED="$$" \
390 && python sdk/python/tests/run_test_server.py start_controller \
391 && python sdk/python/tests/run_test_server.py start_keep_proxy \
392 && python sdk/python/tests/run_test_server.py start_keep-web \
393 && python sdk/python/tests/run_test_server.py start_arv-git-httpd \
394 && python sdk/python/tests/run_test_server.py start_ws \
395 && eval $(python sdk/python/tests/run_test_server.py start_nginx || echo "fail=1; false") \
396 && (env | egrep ^ARVADOS) \
399 if [[ $fail = 0 ]] && ! kill -0 "$(cat "$WORKSPACE/tmp/nginx.pid")"; then
400 echo >&2 "ERROR: nginx seems to have died already"
403 if [[ $fail != 0 ]]; then
404 unset ARVADOS_TEST_API_HOST
410 if [[ -n "$all_services_stopped" ]]; then
413 unset ARVADOS_TEST_API_HOST
414 . "$VENVDIR/bin/activate" || return
416 && python sdk/python/tests/run_test_server.py stop_nginx \
417 && python sdk/python/tests/run_test_server.py stop_arv-git-httpd \
418 && python sdk/python/tests/run_test_server.py stop_ws \
419 && python sdk/python/tests/run_test_server.py stop_keep-web \
420 && python sdk/python/tests/run_test_server.py stop_keep_proxy \
421 && python sdk/python/tests/run_test_server.py stop_controller \
422 && python sdk/python/tests/run_test_server.py stop \
423 && all_services_stopped=1
428 failures+=("($(basename $0) interrupted)")
433 setup_ruby_environment() {
434 if [[ -s "$HOME/.rvm/scripts/rvm" ]] ; then
435 source "$HOME/.rvm/scripts/rvm"
437 elif [[ -s "/usr/local/rvm/scripts/rvm" ]] ; then
438 source "/usr/local/rvm/scripts/rvm"
444 if [[ "$using_rvm" == true ]]; then
445 # If rvm is in use, we can't just put separate "dependencies"
446 # and "gems-under-test" paths to GEM_PATH: passenger resets
447 # the environment to the "current gemset", which would lose
448 # our GEM_PATH and prevent our test suites from running ruby
449 # programs (for example, the Workbench test suite could not
450 # boot an API server or run arv). Instead, we have to make an
451 # rvm gemset and use it for everything.
453 [[ `type rvm | head -n1` == "rvm is a function" ]] \
456 # Put rvm's favorite path back in first place (overriding
457 # virtualenv, which just put itself there). Ignore rvm's
458 # complaint about not being in first place already.
459 rvm use @default 2>/dev/null
461 # Create (if needed) and switch to an @arvados-tests-* gemset,
462 # salting the gemset name so it doesn't interfere with
463 # concurrent builds in other workspaces. Leave the choice of
464 # ruby to the caller.
465 gemset="arvados-tests-$(echo -n "${WORKSPACE}" | md5sum | head -c16)"
466 rvm use "@${gemset}" --create \
467 || fatal 'rvm gemset setup'
471 # When our "bundle install"s need to install new gems to
472 # satisfy dependencies, we want them to go where "gem install
473 # --user-install" would put them. (However, if the caller has
474 # already set GEM_HOME, we assume that's where dependencies
475 # should be installed, and we should leave it alone.)
477 if [ -z "$GEM_HOME" ]; then
478 user_gempath="$(gem env gempath)"
479 export GEM_HOME="${user_gempath%%:*}"
481 PATH="$(gem env gemdir)/bin:$PATH"
483 # When we build and install our own gems, we install them in our
484 # $GEMHOME tmpdir, and we want them to be at the front of GEM_PATH and
485 # PATH so integration tests prefer them over other versions that
486 # happen to be installed in $user_gempath, system dirs, etc.
488 tmpdir_gem_home="$(env - PATH="$PATH" HOME="$GEMHOME" gem env gempath | cut -f1 -d:)"
489 PATH="$tmpdir_gem_home/bin:$PATH"
490 export GEM_PATH="$tmpdir_gem_home"
492 echo "Will install dependencies to $(gem env gemdir)"
493 echo "Will install arvados gems to $tmpdir_gem_home"
494 echo "Gem search path is GEM_PATH=$GEM_PATH"
496 bundle config || gem install bundler \
497 || fatal 'install bundler'
501 if [[ "$using_rvm" == true ]]; then
504 GEM_HOME="$tmpdir_gem_home" GEM_PATH="$tmpdir_gem_home" "$@"
508 gem_uninstall_if_exists() {
509 if gem list "$1\$" | egrep '^\w'; then
510 gem uninstall --force --all --executables "$1"
515 local venvdest="$1"; shift
516 if ! [[ -e "$venvdest/bin/activate" ]] || ! [[ -e "$venvdest/bin/pip" ]]; then
517 virtualenv --setuptools "$@" "$venvdest" || fatal "virtualenv $venvdest failed"
518 elif [[ -n "$short" ]]; then
521 if [[ $("$venvdest/bin/python" --version 2>&1) =~ \ 3\.[012]\. ]]; then
522 # pip 8.0.0 dropped support for python 3.2, e.g., debian wheezy
523 "$venvdest/bin/pip" install --no-cache-dir 'setuptools>=18.5' 'pip>=7,<8'
525 "$venvdest/bin/pip" install --no-cache-dir 'setuptools>=18.5' 'pip>=7'
527 # ubuntu1404 can't seem to install mock via tests_require, but it can do this.
528 "$venvdest/bin/pip" install --no-cache-dir 'mock>=1.0' 'pbr<1.7.0'
534 echo "WORKSPACE=$WORKSPACE"
536 if [[ -z "$CONFIGSRC" ]] && [[ -d "$HOME/arvados-api-server" ]]; then
537 # Jenkins expects us to use this by default.
538 CONFIGSRC="$HOME/arvados-api-server"
541 # Clean up .pyc files that may exist in the workspace
543 find -name '*.pyc' -delete
545 if [[ -z "$temp" ]]; then
549 # Set up temporary install dirs (unless existing dirs were supplied)
550 for tmpdir in VENVDIR VENV3DIR GOPATH GEMHOME PERLINSTALLBASE R_LIBS
552 if [[ -z "${!tmpdir}" ]]; then
553 eval "$tmpdir"="$temp/$tmpdir"
555 if ! [[ -d "${!tmpdir}" ]]; then
556 mkdir "${!tmpdir}" || fatal "can't create ${!tmpdir} (does $temp exist?)"
560 rm -vf "${WORKSPACE}/tmp/*.log"
562 export PERLINSTALLBASE
563 export PERL5LIB="$PERLINSTALLBASE/lib/perl5${PERL5LIB:+:$PERL5LIB}"
569 # Jenkins config requires that glob tmp/*.log match something. Ensure
570 # that happens even if we don't end up running services that set up
572 mkdir -p "${WORKSPACE}/tmp/" || fatal "could not mkdir ${WORKSPACE}/tmp"
573 touch "${WORKSPACE}/tmp/controller.log" || fatal "could not touch ${WORKSPACE}/tmp/controller.log"
575 unset http_proxy https_proxy no_proxy
578 # Note: this must be the last time we change PATH, otherwise rvm will
580 setup_ruby_environment
588 mkdir -p "$GOPATH/src/git.curoverse.com"
589 if [[ ! -h "$GOPATH/src/git.curoverse.com/arvados.git" ]]; then
591 "$GOPATH/src/git.curoverse.com/arvados.git/tmp/GOPATH" \
592 "$GOPATH/src/git.curoverse.com/arvados.git/tmp" \
593 "$GOPATH/src/git.curoverse.com/arvados.git"; do
594 [[ -d "$d" ]] && rmdir "$d"
598 "$GOPATH/src/git.curoverse.com/arvados.git/arvados" \
599 "$GOPATH/src/git.curoverse.com/arvados.git"; do
600 [[ -h "$d" ]] && rm "$d"
602 ln -vsfT "$WORKSPACE" "$GOPATH/src/git.curoverse.com/arvados.git"
603 go get -v github.com/kardianos/govendor
604 cd "$GOPATH/src/git.curoverse.com/arvados.git"
605 if [[ -n "$short" ]]; then
607 "$GOPATH/bin/govendor" sync
609 # Remove cached source dirs in workdir. Otherwise, they will
610 # not qualify as +missing or +external below, and we won't be
611 # able to detect that they're missing from vendor/vendor.json.
614 "$GOPATH/bin/govendor" sync
615 [[ -z $("$GOPATH/bin/govendor" list +unused +missing +external | tee /dev/stderr) ]] \
616 || fatal "vendor/vendor.json has unused or missing dependencies -- try:
618 (export GOPATH=\"${GOPATH}\"; cd \$GOPATH/src/git.curoverse.com/arvados.git && \$GOPATH/bin/govendor add +missing +external && \$GOPATH/bin/govendor remove +unused)
622 ) || fatal "Go setup failed"
624 setup_virtualenv "$VENVDIR" --python python2.7
625 . "$VENVDIR/bin/activate"
627 # Needed for run_test_server.py which is used by certain (non-Python) tests.
628 pip install --no-cache-dir PyYAML \
629 || fatal "pip install PyYAML failed"
631 # Preinstall libcloud if using a fork; otherwise nodemanager "pip
632 # install" won't pick it up by default.
633 if [[ -n "$LIBCLOUD_PIN_SRC" ]]; then
634 pip freeze 2>/dev/null | egrep ^apache-libcloud==$LIBCLOUD_PIN \
635 || pip install --pre --ignore-installed --no-cache-dir "$LIBCLOUD_PIN_SRC" >/dev/null \
636 || fatal "pip install apache-libcloud failed"
639 # Deactivate Python 2 virtualenv
642 # If Python 3 is available, set up its virtualenv in $VENV3DIR.
643 # Otherwise, skip dependent tests.
644 PYTHON3=$(which python3)
645 if [[ ${?} = 0 ]]; then
646 setup_virtualenv "$VENV3DIR" --python python3
651 Warning: python3 could not be found. Python 3 tests will be skipped.
656 if ! which bundler >/dev/null
658 gem install --user-install bundler || fatal 'Could not install bundler'
667 if [[ "$remain" -gt 1 ]]; then
668 remain=$((${remain}-1))
669 title "(repeating ${remain} more times)"
673 elif [[ "$retry" == 1 ]]; then
674 read -p 'Try again? [Y/n] ' x
675 if [[ "$x" != "y" ]] && [[ "$x" != "" ]]
687 apps/workbench_units | apps/workbench_functionals | apps/workbench_integration)
690 services/nodemanager | services/nodemanager_integration)
691 suite=services/nodemanager_suite
697 if [[ -n "${skip[$suite]}" || \
698 -n "${skip[$1]}" || \
699 (${#only[@]} -ne 0 && ${only[$suite]} -eq 0 && ${only[$1]} -eq 0) ]]; then
706 gofmt | doc | lib/cli | lib/cloud/azure | lib/cloud/ec2 | lib/cmd | lib/dispatchcloud/ssh_executor | lib/dispatchcloud/worker)
707 # don't care whether services are running
710 if ! start_services; then
711 title "test $1 -- failed to start services"
716 retry do_test_once ${@}
725 if which deactivate >/dev/null; then deactivate; fi
726 if ! . "$VENVDIR/bin/activate"
729 elif [[ "$2" == "go" ]]
731 covername="coverage-$(echo "$1" | sed -e 's/\//_/g')"
732 coverflags=("-covermode=count" "-coverprofile=$WORKSPACE/tmp/.$covername.tmp")
733 # We do "go get -t" here to catch compilation errors
734 # before trying "go test". Otherwise, coverage-reporting
735 # mode makes Go show the wrong line numbers when reporting
736 # compilation errors.
737 go get -ldflags "-X main.version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}" -t "git.curoverse.com/arvados.git/$1" && \
738 cd "$GOPATH/src/git.curoverse.com/arvados.git/$1" && \
739 if [[ -n "${testargs[$1]}" ]]
741 # "go test -check.vv giturl" doesn't work, but this
743 go test ${short:+-short} ${testargs[$1]}
745 # The above form gets verbose even when testargs is
746 # empty, so use this form in such cases:
747 go test ${short:+-short} ${coverflags[@]} "git.curoverse.com/arvados.git/$1"
750 if [[ -f "$WORKSPACE/tmp/.$covername.tmp" ]]
752 go tool cover -html="$WORKSPACE/tmp/.$covername.tmp" -o "$WORKSPACE/tmp/$covername.html"
753 rm "$WORKSPACE/tmp/.$covername.tmp"
755 [[ $result = 0 ]] && gofmt -e -d *.go
756 elif [[ "$2" == "pip" ]]
759 cd "$WORKSPACE/$1" && while :
761 tries=$((${tries}+1))
762 # $3 can name a path directory for us to use, including trailing
763 # slash; e.g., the bin/ subdirectory of a virtualenv.
764 "${3}python" setup.py ${short:+--short-tests-only} test ${testargs[$1]}
766 if [[ ${tries} < 3 && ${result} == 137 ]]
768 printf '\n*****\n%s tests killed -- retrying\n*****\n\n' "$1"
774 elif [[ "$2" != "" ]]
781 checkexit $result "$1 tests"
782 title "test $1 -- `timer`"
787 if [[ -n "${skip[install]}" || ( -n "${only_install}" && "${only_install}" != "${1}" && "${only_install}" != "${2}" ) ]]; then
790 retry do_install_once ${@}
797 if which deactivate >/dev/null; then deactivate; fi
798 if [[ "$1" != "env" ]] && ! . "$VENVDIR/bin/activate"; then
800 elif [[ "$2" == "go" ]]
802 go get -ldflags "-X main.version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}" -t "git.curoverse.com/arvados.git/$1"
803 elif [[ "$2" == "pip" ]]
805 # $3 can name a path directory for us to use, including trailing
806 # slash; e.g., the bin/ subdirectory of a virtualenv.
808 # Need to change to a different directory after creating
809 # the source dist package to avoid a pip bug.
810 # see https://arvados.org/issues/5766 for details.
812 # Also need to install twice, because if it believes the package is
813 # already installed, pip it won't install it. So the first "pip
814 # install" ensures that the dependencies are met, the second "pip
815 # install" ensures that we've actually installed the local package
818 && "${3}python" setup.py sdist rotate --keep=1 --match .tar.gz \
820 && "${3}pip" install --no-cache-dir --quiet "$WORKSPACE/$1/dist"/*.tar.gz \
821 && "${3}pip" install --no-cache-dir --quiet --no-deps --ignore-installed "$WORKSPACE/$1/dist"/*.tar.gz
822 elif [[ "$2" != "" ]]
829 checkexit $result "$1 install"
830 title "install $1 -- `timer`"
834 bundle_install_trylocal() {
837 echo "(Running bundle install --local. 'could not find package' messages are OK.)"
838 if ! bundle install --local --no-deployment; then
839 echo "(Running bundle install again, without --local.)"
840 bundle install --no-deployment
847 cd "$WORKSPACE/doc" \
848 && bundle_install_trylocal \
855 with_test_gemset gem_uninstall_if_exists "$gemname" \
856 && cd "$WORKSPACE/$srcpath" \
857 && bundle_install_trylocal \
858 && gem build "$gemname.gemspec" \
859 && with_test_gemset gem install --no-ri --no-rdoc $(ls -t "$gemname"-*.gem|head -n1)
863 install_gem arvados sdk/ruby
867 if [[ "$NEED_SDK_R" = true ]]; then
868 cd "$WORKSPACE/sdk/R" \
869 && Rscript --vanilla install_deps.R
874 cd "$WORKSPACE/sdk/perl" \
875 && perl Makefile.PL INSTALL_BASE="$PERLINSTALLBASE" \
876 && make install INSTALLDIRS=perl
880 install_gem arvados-cli sdk/cli
883 install_services/login-sync() {
884 install_gem arvados-login-sync services/login-sync
887 install_services/api() {
888 cd "$WORKSPACE/services/api" \
889 && RAILS_ENV=test bundle_install_trylocal
891 rm -f config/environments/test.rb
892 cp config/environments/test.rb.example config/environments/test.rb
894 if [ -n "$CONFIGSRC" ]
896 for f in database.yml
898 cp "$CONFIGSRC/$f" config/ || fatal "$f"
902 # Clear out any lingering postgresql connections to the test
903 # database, so that we can drop it. This assumes the current user
904 # is a postgresql superuser.
905 cd "$WORKSPACE/services/api" \
906 && test_database=$(python -c "import yaml; print yaml.load(file('config/database.yml'))['test']['database']") \
907 && psql "$test_database" -c "SELECT pg_terminate_backend (pg_stat_activity.pid::int) FROM pg_stat_activity WHERE pg_stat_activity.datname = '$test_database';" 2>/dev/null
909 mkdir -p "$WORKSPACE/services/api/tmp/pids"
911 cert="$WORKSPACE/services/api/tmp/self-signed"
912 if [[ ! -e "$cert.pem" || "$(date -r "$cert.pem" +%s)" -lt 1512659226 ]]; then
914 dir="$WORKSPACE/services/api/tmp"
916 openssl req -newkey rsa:2048 -nodes -subj '/C=US/ST=State/L=City/CN=localhost' -out "$cert.csr" -keyout "$cert.key" </dev/null
917 openssl x509 -req -in "$cert.csr" -signkey "$cert.key" -out "$cert.pem" -days 3650 -extfile <(printf 'subjectAltName=DNS:localhost,DNS:::1,DNS:0.0.0.0,DNS:127.0.0.1,IP:::1,IP:0.0.0.0,IP:127.0.0.1')
921 cd "$WORKSPACE/services/api" \
923 && mkdir -p tmp/git \
925 && tar xf ../../test/test.git.tar \
926 && mkdir -p internal.git \
927 && git --git-dir internal.git init \
930 cd "$WORKSPACE/services/api" \
931 && RAILS_ENV=test bundle exec rake db:drop \
932 && RAILS_ENV=test bundle exec rake db:setup \
933 && RAILS_ENV=test bundle exec rake db:fixtures:load
936 declare -a pythonstuff
943 services/dockercleaner:py3
946 tools/crunchstat-summary
961 lib/dispatchcloud/container
962 lib/dispatchcloud/scheduler
963 lib/dispatchcloud/ssh_executor
964 lib/dispatchcloud/worker
977 services/arv-git-httpd
983 services/keep-balance
985 services/crunch-dispatch-local
986 services/crunch-dispatch-slurm
989 tools/keep-block-check
995 install_apps/workbench() {
996 cd "$WORKSPACE/apps/workbench" \
997 && mkdir -p tmp/cache \
998 && RAILS_ENV=test bundle_install_trylocal \
999 && RAILS_ENV=test RAILS_GROUPS=assets bundle exec rake npm:install
1006 ARVADOS_API_HOST=qr1hi.arvadosapi.com
1007 # Make sure python-epydoc is installed or the next line won't
1009 PYTHONPATH=$WORKSPACE/sdk/python/ bundle exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
1014 cd "$WORKSPACE" || return 1
1015 dirs=$(ls -d */ | egrep -v 'vendor|tmp')
1016 [[ -z "$(gofmt -e -d $dirs | tee -a /dev/stderr)" ]]
1019 test_services/api() {
1020 rm -f "$WORKSPACE/services/api/git-commit.version"
1021 cd "$WORKSPACE/services/api" \
1022 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test TESTOPTS=-v ${testargs[services/api]}
1026 cd "$WORKSPACE/sdk/ruby" \
1027 && bundle exec rake test TESTOPTS=-v ${testargs[sdk/ruby]}
1031 if [[ "$NEED_SDK_R" = true ]]; then
1032 cd "$WORKSPACE/sdk/R" \
1033 && Rscript --vanilla run_test.R
1038 cd "$WORKSPACE/sdk/cli" \
1039 && mkdir -p /tmp/keep \
1040 && KEEP_LOCAL_STORE=/tmp/keep bundle exec rake test TESTOPTS=-v ${testargs[sdk/cli]}
1043 test_services/login-sync() {
1044 cd "$WORKSPACE/services/login-sync" \
1045 && bundle exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
1048 test_services/nodemanager_integration() {
1049 cd "$WORKSPACE/services/nodemanager" \
1050 && tests/integration_test.py ${testargs[services/nodemanager_integration]}
1053 test_apps/workbench_units() {
1054 cd "$WORKSPACE/apps/workbench" \
1055 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:units TESTOPTS=-v ${testargs[apps/workbench]} ${testargs[apps/workbench_units]}
1058 test_apps/workbench_functionals() {
1059 cd "$WORKSPACE/apps/workbench" \
1060 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:functionals TESTOPTS=-v ${testargs[apps/workbench]} ${testargs[apps/workbench_functionals]}
1063 test_apps/workbench_integration() {
1064 cd "$WORKSPACE/apps/workbench" \
1065 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:integration TESTOPTS=-v ${testargs[apps/workbench]} ${testargs[apps/workbench_integration]}
1068 test_apps/workbench_benchmark() {
1069 cd "$WORKSPACE/apps/workbench" \
1070 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:benchmark ${testargs[apps/workbench_benchmark]}
1073 test_apps/workbench_profile() {
1074 cd "$WORKSPACE/apps/workbench" \
1075 && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test:profile ${testargs[apps/workbench_profile]}
1079 # Install parts needed by test suites
1081 do_install cmd/arvados-server go
1084 do_install sdk/python pip
1086 do_install services/api
1087 do_install services/arv-git-httpd go
1088 do_install services/keepproxy go
1089 do_install services/keepstore go
1090 do_install services/keep-web go
1091 do_install services/ws go
1101 do_install services/login-sync
1102 for p in "${pythonstuff[@]}"
1105 if [[ ${dir} = ${p} ]]; then
1106 if [[ -z ${skip[python2]} ]]; then
1107 do_install ${dir} pip
1109 elif [[ -n ${PYTHON3} ]]; then
1110 if [[ -z ${skip[python3]} ]]; then
1111 do_install ${dir} pip "$VENV3DIR/bin/"
1115 do_install services/api
1116 for g in "${gostuff[@]}"
1120 do_install apps/workbench
1125 do_test services/api
1127 # Shortcut for when we're only running apiserver tests. This saves a bit of time,
1128 # because we don't need to start up the api server for subsequent tests.
1129 if [ ! -z "$only" ] && [ "$only" == "services/api" ]; then
1130 rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
1139 do_test services/login-sync
1140 do_test services/nodemanager_integration
1141 for p in "${pythonstuff[@]}"
1144 if [[ ${dir} = ${p} ]]; then
1145 if [[ -z ${skip[python2]} ]]; then
1148 elif [[ -n ${PYTHON3} ]]; then
1149 if [[ -z ${skip[python3]} ]]; then
1150 do_test ${dir} pip "$VENV3DIR/bin/"
1155 for g in "${gostuff[@]}"
1159 do_test apps/workbench_units
1160 do_test apps/workbench_functionals
1161 do_test apps/workbench_integration
1162 do_test apps/workbench_benchmark
1163 do_test apps/workbench_profile
1166 help_interactive() {
1167 echo "== Interactive commands:"
1168 echo "TARGET (short for 'test DIR')"
1170 echo "test TARGET:py3 (test with python3)"
1171 echo "test TARGET -check.vv (pass arguments to test)"
1172 echo "install TARGET"
1173 echo "install env (go/python libs)"
1174 echo "install deps (go/python libs + arvados components needed for integration tests)"
1175 echo "reset (...services used by integration tests)"
1177 echo "== Test targets:"
1178 echo "${!testfuncargs[@]}" | tr ' ' '\n' | sort | column
1183 declare -A testfuncargs=()
1184 for g in "${gostuff[@]}"; do
1185 testfuncargs[$g]="$g go"
1187 for p in "${pythonstuff[@]}"; do
1189 testfuncargs[$dir]="$dir pip $VENVDIR/bin/"
1190 testfuncargs[$dir:py3]="$dir pip $VENV3DIR/bin/"
1193 if [[ -z ${interactive} ]]; then
1200 if [[ -e "$VENVDIR/bin/activate" ]]; then stop_services; fi
1202 if [[ "$TERM" = dumb ]]; then
1203 # assume emacs, or something, is offering a history buffer
1204 # and pre-populating the command will only cause trouble
1206 elif [[ "$nextcmd" != "install deps" ]]; then
1208 elif [[ -e "$VENVDIR/bin/activate" ]]; then
1209 nextcmd="test lib/cmd"
1211 nextcmd="install deps"
1216 nextcmd="install deps"
1218 while read -p 'What next? ' -e -i "${nextcmd}" nextcmd; do
1219 read verb target opts <<<"${nextcmd}"
1220 target="${target%/}"
1221 target="${target/\/:/:}"
1238 testargs["$target"]="${opts}"
1239 tt="${testfuncargs[${target}]}"
1249 if [[ ${#successes[@]} -gt 0 || ${#failures[@]} -gt 0 ]]; then