sdk/cwl/test_with_arvbox.sh

   1 #!/bin/sh
   2
   3 if ! which arvbox >/dev/null ; then
   4     export PATH=$PATH:$(readlink -f $(dirname $0)/../../tools/arvbox/bin)
   5 fi
   6
   7 reset_container=1
   8 leave_running=0
   9 config=dev
  10
  11 while test -n "$1" ; do
  12     arg="$1"
  13     case "$arg" in
  14         --no-reset-container)
  15             reset_container=0
  16             shift
  17             ;;
  18         --leave-running)
  19             leave_running=1
  20             shift
  21             ;;
  22         --config)
  23             config=$2
  24             shift ; shift
  25             ;;
  26         -h|--help)
  27             echo "$0 [--no-reset-container] [--leave-running] [--config dev|localdemo]"
  28             exit
  29             ;;
  30         -*)
  31             break
  32             ;;
  33     esac
  34 done
  35
  36 if test -z "$ARVBOX_CONTAINER" ; then
  37    export ARVBOX_CONTAINER=cwltest
  38 fi
  39
  40 if test $reset_container = 1 ; then
  41     arvbox reset -f
  42 fi
  43
  44 arvbox start $config
  45
  46 arvbox pipe <<EOF
  47 set -eu -o pipefail
  48
  49 . /usr/local/lib/arvbox/common.sh
  50
  51 cd /usr/src/arvados/sdk/cwl
  52 python setup.py sdist
  53 pip_install \$(ls dist/arvados-cwl-runner-*.tar.gz | tail -n1)
  54
  55 mkdir -p /tmp/cwltest
  56 cd /tmp/cwltest
  57 if ! test -d common-workflow-language ; then
  58   git clone https://github.com/common-workflow-language/common-workflow-language.git
  59 fi
  60 cd common-workflow-language
  61 git pull
  62 export ARVADOS_API_HOST=localhost:8000
  63 export ARVADOS_API_HOST_INSECURE=1
  64 export ARVADOS_API_TOKEN=\$(cat /var/lib/arvados/superuser_token)
  65
  66 arv-keepdocker --pull arvados/jobs
  67
  68 env
  69 exec ./run_test.sh "$@"
  70 EOF
  71
  72 CODE=$?
  73
  74 if test $leave_running = 0 ; then
  75     arvbox stop
  76 fi
  77
  78 exit $CODE