2 uuid: zzzzz-xvhdp-cr4queuedcontnr
3 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
7 created_at: <%= 2.minute.ago.to_s(:db) %>
8 updated_at: <%= 1.minute.ago.to_s(:db) %>
9 modified_at: <%= 1.minute.ago.to_s(:db) %>
10 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
14 command: ["echo", "hello"]
15 container_uuid: zzzzz-dz642-queuedcontainer
21 uuid: zzzzz-xvhdp-cr4runningcntnr
22 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
26 created_at: <%= 2.minute.ago.to_s(:db) %>
27 updated_at: <%= 1.minute.ago.to_s(:db) %>
28 modified_at: <%= 1.minute.ago.to_s(:db) %>
29 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
33 command: ["echo", "hello"]
34 container_uuid: zzzzz-dz642-runningcontainr
40 uuid: zzzzz-xvhdp-cr4runningcntn2
41 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
45 created_at: 2016-01-11 11:11:11.111111111 Z
46 updated_at: 2016-01-11 11:11:11.111111111 Z
47 modified_at: 2016-01-12 11:11:11.111111111 Z
48 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
52 command: ["echo", "hello"]
53 container_uuid: zzzzz-dz642-runningcontain2
59 uuid: zzzzz-xvhdp-cr4completedctr
60 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
61 name: completed container request
64 created_at: <%= 2.minute.ago.to_s(:db) %>
65 updated_at: <%= 1.minute.ago.to_s(:db) %>
66 modified_at: <%= 1.minute.ago.to_s(:db) %>
67 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
71 command: ["echo", "hello"]
72 container_uuid: zzzzz-dz642-compltcontainer
78 uuid: zzzzz-xvhdp-cr4completedcr2
79 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
83 created_at: 2016-01-11 11:11:11.111111111 Z
84 updated_at: 2016-01-11 11:11:11.111111111 Z
85 modified_at: 2016-01-11 11:11:11.111111111 Z
86 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
90 command: ["echo", "hello"]
91 container_uuid: zzzzz-dz642-compltcontainr2
97 uuid: zzzzz-xvhdp-9zacv3o1xw6sxz5
98 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
102 created_at: 2016-01-11 11:11:11.111111111 Z
103 updated_at: 2016-01-11 11:11:11.111111111 Z
104 modified_at: 2016-01-11 11:11:11.111111111 Z
105 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
106 container_image: test
109 command: ["request-another-container", "echo", "hello"]
110 container_uuid: zzzzz-dz642-requestingcntnr
116 uuid: zzzzz-xvhdp-cr4requestercnt
117 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
121 created_at: 2016-01-11 11:11:11.111111111 Z
122 updated_at: 2016-01-11 11:11:11.111111111 Z
123 modified_at: 2016-01-11 11:11:11.111111111 Z
124 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
125 container_image: test
128 command: ["echo", "hello"]
129 container_uuid: zzzzz-dz642-requestercntnr1
130 requesting_container_uuid: zzzzz-dz642-requestingcntnr
136 uuid: zzzzz-xvhdp-cr4requestercn2
137 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
141 created_at: 2016-01-11 11:11:11.111111111 Z
142 updated_at: 2016-01-11 11:11:11.111111111 Z
143 modified_at: 2016-01-11 11:11:11.111111111 Z
144 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
145 container_image: test
148 command: ["echo", "hello"]
149 requesting_container_uuid: zzzzz-dz642-requestercntnr1
154 running_anonymous_accessible:
155 uuid: zzzzz-xvhdp-runninganonaccs
156 owner_uuid: zzzzz-j7d0g-zhxawtyetzwc5f0
157 name: running anonymously accessible cr
160 created_at: 2016-01-11 11:11:11.111111111 Z
161 updated_at: 2016-01-11 11:11:11.111111111 Z
162 modified_at: 2016-01-11 11:11:11.111111111 Z
163 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
164 container_image: test
167 command: ["echo", "hello"]
168 container_uuid: zzzzz-dz642-runningcontain2
174 uuid: zzzzz-xvhdp-cr4failedcontnr
175 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
176 name: cr for container exit code not 0
179 created_at: 2016-01-11 11:11:11.111111111 Z
180 updated_at: 2016-01-11 11:11:11.111111111 Z
181 modified_at: 2016-01-11 11:11:11.111111111 Z
182 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
183 container_image: test
186 command: ["echo", "hello"]
187 container_uuid: zzzzz-dz642-failedcontainr1
192 canceled_with_queued_container:
193 uuid: zzzzz-xvhdp-canceledqueuedc
194 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
195 name: canceled with queued container
198 created_at: 2016-01-11 11:11:11.111111111 Z
199 updated_at: 2016-01-11 11:11:11.111111111 Z
200 modified_at: 2016-01-11 11:11:11.111111111 Z
201 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
202 container_image: test
205 command: ["echo", "hello"]
206 container_uuid: zzzzz-dz642-queuedcontainer
211 canceled_with_locked_container:
212 uuid: zzzzz-xvhdp-canceledlocekdc
213 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
214 name: canceled with locked container
217 created_at: 2016-01-11 11:11:11.111111111 Z
218 updated_at: 2016-01-11 11:11:11.111111111 Z
219 modified_at: 2016-01-11 11:11:11.111111111 Z
220 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
221 container_image: test
224 command: ["echo", "hello"]
225 container_uuid: zzzzz-dz642-lockedcontainer
230 canceled_with_running_container:
231 uuid: zzzzz-xvhdp-canceledrunning
232 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
233 name: canceled with running container
236 created_at: 2016-01-11 11:11:11.111111111 Z
237 updated_at: 2016-01-11 11:11:11.111111111 Z
238 modified_at: 2016-01-11 11:11:11.111111111 Z
239 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
240 container_image: test
243 command: ["echo", "hello"]
244 container_uuid: zzzzz-dz642-runningcontainr
250 uuid: zzzzz-xvhdp-cr4uncommittedc
251 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
253 created_at: <%= 2.minute.ago.to_s(:db) %>
254 updated_at: <%= 1.minute.ago.to_s(:db) %>
255 modified_at: <%= 1.minute.ago.to_s(:db) %>
256 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
257 command: ["arvados-cwl-runner", "--local", "--api=containers",
258 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
259 output_path: "/var/spool/cwl"
260 cwd: "/var/spool/cwl"
263 container_image: arvados/jobs
265 "/var/lib/cwl/workflow.json": {
268 "cwlVersion": "v1.0",
271 "class": "CommandLineTool",
272 "baseCommand": ["echo"],
275 "doc": "a longer documentation string for this parameter (optional)",
278 "label": "a short label for this parameter (optional)",
279 "inputBinding": {"position": 1}
282 "type": ["null", "boolean"],
283 "id": "ex_boolean_opt",
284 "inputBinding": {"position": 1}
287 "doc": "directory selection should present the workbench collection picker",
290 "inputBinding": {"position": 1}
295 "inputBinding": {"position": 1}
298 "doc": "file selection should present the workbench file picker",
301 "inputBinding": {"position": 1}
306 "inputBinding": {"position": 1}
311 "inputBinding": {"position": 1}
314 "type": ["null", "int"],
316 "inputBinding": {"position": 1}
321 "inputBinding": {"position": 1}
326 "inputBinding": {"position": 1}
329 "type": ["null", "string"],
330 "id": "ex_string_opt",
331 "inputBinding": {"position": 1}
336 "symbols": ["a", "b", "c"]
339 "inputBinding": {"position": 1}
344 "symbols": ["a", "b", "c"]
347 "inputBinding": {"position": 1}
354 "/var/lib/cwl/cwl.input.json": {
360 "path": "/var/spool/cwl/cwl.output.json"
363 "kind": "collection",
372 uncommitted_ready_to_run:
373 uuid: zzzzz-xvhdp-cr4uncommittedd
374 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
375 name: uncommitted_ready_to_run
376 created_at: 2016-01-11 11:11:11.111111111 Z
377 updated_at: 2016-01-11 11:11:11.111111111 Z
378 modified_at: 2016-01-11 11:11:11.111111111 Z
379 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
380 command: ["arvados-cwl-runner", "--local", "--api=containers",
381 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
382 output_path: "/var/spool/cwl"
383 cwd: "/var/spool/cwl"
386 container_image: arvados/jobs
388 "/var/lib/cwl/workflow.json": {
391 "cwlVersion": "v1.0",
392 "class": "CommandLineTool",
393 "baseCommand": ["echo"],
396 "doc": "a longer documentation string for this parameter (optional)",
399 "label": "a short label for this parameter (optional)",
400 "inputBinding": {"position": 1}
403 "type": ["null", "boolean"],
404 "id": "ex_boolean_opt",
405 "inputBinding": {"position": 1}
408 "doc": "directory selection should present the workbench collection picker",
411 "inputBinding": {"position": 1}
416 "inputBinding": {"position": 1}
419 "doc": "file selection should present the workbench file picker",
422 "inputBinding": {"position": 1}
427 "inputBinding": {"position": 1}
432 "inputBinding": {"position": 1}
435 "type": ["null", "int"],
437 "inputBinding": {"position": 1}
442 "inputBinding": {"position": 1}
447 "inputBinding": {"position": 1}
450 "type": ["null", "string"],
451 "id": "ex_string_opt",
452 "inputBinding": {"position": 1}
457 "symbols": ["a", "b", "c"]
460 "inputBinding": {"position": 1}
465 "symbols": ["a", "b", "c"]
468 "inputBinding": {"position": 1}
474 "/var/lib/cwl/cwl.input.json": {
477 "ex_string_opt": null,
480 "ex_boolean_opt": true,
482 "class": "Directory",
483 "location": "keep:1f4b0bc7583c2a7f9102c395f4ffc5e3+45",
484 "arv:collection": "zzzzz-4zz18-znfnqtbbv4spc3w"
489 "location": "keep:1f4b0bc7583c2a7f9102c395f4ffc5e3+45/foo",
490 "arv:collection": "zzzzz-4zz18-znfnqtbbv4spc3w/foo"
501 "path": "/var/spool/cwl/cwl.output.json"
504 "kind": "collection",
513 uncommitted-with-directory-input:
514 uuid: zzzzz-xvhdp-cr4uncommitted2
515 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
516 name: uncommitted with directory input
517 created_at: 2016-01-11 11:11:11.111111111 Z
518 updated_at: 2016-01-11 11:11:11.111111111 Z
519 modified_at: 2016-01-11 11:11:11.111111111 Z
520 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
521 command: ["arvados-cwl-runner", "--local", "--api=containers",
522 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
523 output_path: "/var/spool/cwl"
524 cwd: "/var/spool/cwl"
527 container_image: fa3c1a9cb6783f85f2ecda037e07b8c3+167
529 "/var/lib/cwl/workflow.json": {
532 "cwlVersion": "v1.0",
533 "class": "CommandLineTool",
534 "baseCommand": ["echo"],
538 "id": "directory_type",
539 "inputBinding": {"position": 1}
545 "/var/lib/cwl/cwl.input.json": {
551 "path": "/var/spool/cwl/cwl.output.json"
554 "kind": "collection",
563 uncommitted-with-file-input:
564 uuid: zzzzz-xvhdp-cr4uncommittedf
565 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
566 name: uncommitted with directory input
567 created_at: 2016-01-11 11:11:11.111111111 Z
568 updated_at: 2016-01-11 11:11:11.111111111 Z
569 modified_at: 2016-01-11 11:11:11.111111111 Z
570 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
571 command: ["arvados-cwl-runner", "--local", "--api=containers",
572 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
573 output_path: "/var/spool/cwl"
574 cwd: "/var/spool/cwl"
577 container_image: fa3c1a9cb6783f85f2ecda037e07b8c3+167
579 "/var/lib/cwl/workflow.json": {
582 "cwlVersion": "v1.0",
583 "class": "CommandLineTool",
584 "baseCommand": ["echo"],
589 "inputBinding": {"position": 1}
595 "/var/lib/cwl/cwl.input.json": {
601 "path": "/var/spool/cwl/cwl.output.json"
604 "kind": "collection",
613 uncommitted-with-required-and-optional-inputs:
614 uuid: zzzzz-xvhdp-cr4uncommitted3
615 owner_uuid: zzzzz-tpzed-xurymjxw79nv3jz
616 name: uncommitted with required and optional inputs
617 created_at: 2016-01-11 11:11:11.111111111 Z
618 updated_at: 2016-01-11 11:11:11.111111111 Z
619 modified_at: 2016-01-11 11:11:11.111111111 Z
620 modified_by_user_uuid: zzzzz-tpzed-xurymjxw79nv3jz
621 command: ["arvados-cwl-runner", "--local", "--api=containers",
622 "/var/lib/cwl/workflow.json", "/var/lib/cwl/cwl.input.json"]
623 output_path: "/var/spool/cwl"
624 cwd: "/var/spool/cwl"
627 container_image: fa3c1a9cb6783f85f2ecda037e07b8c3+167
629 "/var/lib/cwl/workflow.json": {
632 "cwlVersion": "v1.0",
633 "class": "CommandLineTool",
634 "baseCommand": ["echo"],
638 "id": "int_required",
639 "inputBinding": {"position": 1}
642 "type": ["null", "int"],
643 "id": "int_optional",
644 "inputBinding": {"position": 1}
650 "/var/lib/cwl/cwl.input.json": {
656 "path": "/var/spool/cwl/cwl.output.json"
659 "kind": "collection",
668 # Test Helper trims the rest of the file
670 # Do not add your fixtures below this line as the rest of this file will be trimmed by test_helper
672 # container requests in project_with_2_pipelines_and_60_crs
673 <% for i in 1..60 do %>
675 uuid: zzzzz-xvhdp-oneof60crs<%= i.to_s.rjust(5, '0') %>
676 created_at: <%= ((i+5)/5).hour.ago.to_s(:db) %>
677 owner_uuid: zzzzz-j7d0g-nnncrspipelines
678 name: cr-<%= i.to_s %>
680 command: ["echo", "hello"]
683 # Do not add your fixtures below this line as the rest of this file will be trimmed by test_helper