- it("should run workflow with project-uuid", async () => {
- // given
- getState = () => ({
- auth: {
- user: {
- email: "test@gmail.com",
- firstName: "TestFirstName",
- lastName: "TestLastName",
- uuid: "ce8i5-tpzed-yid70bw31f51234",
- ownerUuid: "ce8i5-tpzed-000000000000000",
- isAdmin: false,
- isActive: true,
- username: "testfirstname",
- prefs: {
- profile: {},
- },
- },
- },
- runProcessPanel: {
- processPathname: "/projects/ce8i5-tpzed-yid70bw31f51234",
- processOwnerUuid: "ce8i5-tpzed-yid70bw31f51234",
- selectedWorkflow: {
- href: "/workflows/ce8i5-7fd4e-2tlnerdkxnl4fjt",
- kind: "arvados#workflow",
- etag: "8gh5xlhlgo61yqscyl1spw8tc",
- uuid: "ce8i5-7fd4e-2tlnerdkxnl4fjt",
- ownerUuid: "ce8i5-tpzed-o4njwilpp4ov321",
- createdAt: "2020-07-15T19:40:50.296041000Z",
- modifiedByClientUuid: "ce8i5-ozdt8-libnr89sc5nq111",
- modifiedByUserUuid: "ce8i5-tpzed-o4njwilpp4ov321",
- modifiedAt: "2020-07-15T19:40:50.296376000Z",
- name: "revsort.cwl",
- description:
- "Reverse the lines in a document, then sort those lines.",
- definition:
- '{\n "$graph": [\n {\n "class": "Workflow",\n "doc": "Reverse the lines in a document, then sort those lines.",\n "id": "#main",\n "inputs": [\n {\n "default": null,\n "doc": "The input file to be processed.",\n "id": "#main/input",\n "type": "File"\n },\n {\n "default": true,\n "doc": "If true, reverse (decending) sort",\n "id": "#main/reverse_sort",\n "type": "boolean"\n }\n ],\n "outputs": [\n {\n "doc": "The output with the lines reversed and sorted.",\n "id": "#main/output",\n "outputSource": "#main/sorted/output",\n "type": "File"\n }\n ],\n "steps": [\n {\n "id": "#main/rev",\n "in": [\n {\n "id": "#main/rev/input",\n "source": "#main/input"\n }\n ],\n "out": [\n "#main/rev/output"\n ],\n "run": "#revtool.cwl"\n },\n {\n "id": "#main/sorted",\n "in": [\n {\n "id": "#main/sorted/input",\n "source": "#main/rev/output"\n },\n {\n "id": "#main/sorted/reverse",\n "source": "#main/reverse_sort"\n }\n ],\n "out": [\n "#main/sorted/output"\n ],\n "run": "#sorttool.cwl"\n }\n ]\n },\n {\n "baseCommand": "rev",\n "class": "CommandLineTool",\n "doc": "Reverse each line using the `rev` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#revtool.cwl",\n "inputs": [\n {\n "id": "#revtool.cwl/input",\n "inputBinding": {},\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#revtool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n },\n {\n "baseCommand": "sort",\n "class": "CommandLineTool",\n "doc": "Sort lines using the `sort` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#sorttool.cwl",\n "inputs": [\n {\n "id": "#sorttool.cwl/reverse",\n "inputBinding": {\n "position": 1,\n "prefix": "-r"\n },\n "type": "boolean"\n },\n {\n "id": "#sorttool.cwl/input",\n "inputBinding": {\n "position": 2\n },\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#sorttool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n }\n ],\n "cwlVersion": "v1.0"\n}',
- },
- },
- });
+ it("should run workflow with project-uuid", async () => {
+ // given
+ getState = () => ({
+ auth: {
+ user: {
+ email: "test@gmail.com",
+ firstName: "TestFirstName",
+ lastName: "TestLastName",
+ uuid: "ce8i5-tpzed-yid70bw31f51234",
+ ownerUuid: "ce8i5-tpzed-000000000000000",
+ isAdmin: false,
+ isActive: true,
+ username: "testfirstname",
+ prefs: {
+ profile: {},
+ },
+ },
+ },
+ runProcessPanel: {
+ processPathname: "/projects/ce8i5-tpzed-yid70bw31f51234",
+ processOwnerUuid: "ce8i5-tpzed-yid70bw31f51234",
+ selectedWorkflow: {
+ href: "/workflows/ce8i5-7fd4e-2tlnerdkxnl4fjt",
+ kind: "arvados#workflow",
+ etag: "8gh5xlhlgo61yqscyl1spw8tc",
+ uuid: "ce8i5-7fd4e-2tlnerdkxnl4fjt",
+ ownerUuid: "ce8i5-tpzed-o4njwilpp4ov321",
+ createdAt: "2020-07-15T19:40:50.296041000Z",
+ modifiedByClientUuid: "ce8i5-ozdt8-libnr89sc5nq111",
+ modifiedByUserUuid: "ce8i5-tpzed-o4njwilpp4ov321",
+ modifiedAt: "2020-07-15T19:40:50.296376000Z",
+ name: "revsort.cwl",
+ description:
+ "Reverse the lines in a document, then sort those lines.",
+ definition:
+ '{\n "$graph": [\n {\n "class": "Workflow",\n "doc": "Reverse the lines in a document, then sort those lines.",\n "id": "#main",\n "hints":[{"class":"http://arvados.org/cwl#WorkflowRunnerResources","acrContainerImage":"arvados/jobs:2.0.4"}], "inputs": [\n {\n "default": null,\n "doc": "The input file to be processed.",\n "id": "#main/input",\n "type": "File"\n },\n {\n "default": true,\n "doc": "If true, reverse (decending) sort",\n "id": "#main/reverse_sort",\n "type": "boolean"\n }\n ],\n "outputs": [\n {\n "doc": "The output with the lines reversed and sorted.",\n "id": "#main/output",\n "outputSource": "#main/sorted/output",\n "type": "File"\n }\n ],\n "steps": [\n {\n "id": "#main/rev",\n "in": [\n {\n "id": "#main/rev/input",\n "source": "#main/input"\n }\n ],\n "out": [\n "#main/rev/output"\n ],\n "run": "#revtool.cwl"\n },\n {\n "id": "#main/sorted",\n "in": [\n {\n "id": "#main/sorted/input",\n "source": "#main/rev/output"\n },\n {\n "id": "#main/sorted/reverse",\n "source": "#main/reverse_sort"\n }\n ],\n "out": [\n "#main/sorted/output"\n ],\n "run": "#sorttool.cwl"\n }\n ]\n },\n {\n "baseCommand": "rev",\n "class": "CommandLineTool",\n "doc": "Reverse each line using the `rev` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#revtool.cwl",\n "inputs": [\n {\n "id": "#revtool.cwl/input",\n "inputBinding": {},\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#revtool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n },\n {\n "baseCommand": "sort",\n "class": "CommandLineTool",\n "doc": "Sort lines using the `sort` command",\n "hints": [\n {\n "class": "ResourceRequirement",\n "ramMin": 8\n }\n ],\n "id": "#sorttool.cwl",\n "inputs": [\n {\n "id": "#sorttool.cwl/reverse",\n "inputBinding": {\n "position": 1,\n "prefix": "-r"\n },\n "type": "boolean"\n },\n {\n "id": "#sorttool.cwl/input",\n "inputBinding": {\n "position": 2\n },\n "type": "File"\n }\n ],\n "outputs": [\n {\n "id": "#sorttool.cwl/output",\n "outputBinding": {\n "glob": "output.txt"\n },\n "type": "File"\n }\n ],\n "stdout": "output.txt"\n }\n ],\n "cwlVersion": "v1.0"\n}',
+ },
+ },
+ });