Add workflow definition parser
[arvados-workbench2.git] / src / index.tsx
1 // Copyright (C) The Arvados Authors. All rights reserved.
2 //
3 // SPDX-License-Identifier: AGPL-3.0
4
5 import * as React from 'react';
6 import * as ReactDOM from 'react-dom';
7 import { Provider } from "react-redux";
8 import { MainPanel } from './views/main-panel/main-panel';
9 import './index.css';
10 import { Route } from 'react-router';
11 import createBrowserHistory from "history/createBrowserHistory";
12 import { History } from "history";
13 import { configureStore, RootStore } from './store/store';
14 import { ConnectedRouter } from "react-router-redux";
15 import { ApiToken } from "./views-components/api-token/api-token";
16 import { initAuth } from "./store/auth/auth-action";
17 import { createServices } from "./services/services";
18 import { MuiThemeProvider } from '@material-ui/core/styles';
19 import { CustomTheme } from './common/custom-theme';
20 import { fetchConfig } from './common/config';
21 import { addMenuActionSet, ContextMenuKind } from './views-components/context-menu/context-menu';
22 import { rootProjectActionSet } from "./views-components/context-menu/action-sets/root-project-action-set";
23 import { projectActionSet } from "./views-components/context-menu/action-sets/project-action-set";
24 import { resourceActionSet } from './views-components/context-menu/action-sets/resource-action-set';
25 import { favoriteActionSet } from "./views-components/context-menu/action-sets/favorite-action-set";
26 import { collectionFilesActionSet } from './views-components/context-menu/action-sets/collection-files-action-set';
27 import { collectionFilesItemActionSet } from './views-components/context-menu/action-sets/collection-files-item-action-set';
28 import { collectionActionSet } from './views-components/context-menu/action-sets/collection-action-set';
29 import { collectionResourceActionSet } from './views-components/context-menu/action-sets/collection-resource-action-set';
30 import { processActionSet } from './views-components/context-menu/action-sets/process-action-set';
31 import { loadWorkbench } from './store/workbench/workbench-actions';
32 import { Routes } from '~/routes/routes';
33 import { trashActionSet } from "~/views-components/context-menu/action-sets/trash-action-set";
34 import { ServiceRepository } from '~/services/services';
35 import { initWebSocket } from '~/websocket/websocket';
36 import { Config } from '~/common/config';
37 import { addRouteChangeHandlers } from './routes/route-change-handlers';
38 import { setCurrentTokenDialogApiHost } from '~/store/current-token-dialog/current-token-dialog-actions';
39 import { processResourceActionSet } from '~/views-components/context-menu/action-sets/process-resource-action-set';
40 import { progressIndicatorActions } from '~/store/progress-indicator/progress-indicator-actions';
41 import { setUuidPrefix } from '~/store/workflow-panel/workflow-panel-actions';
42 import { trashedCollectionActionSet } from '~/views-components/context-menu/action-sets/trashed-collection-action-set';
43 import { ContainerRequestState } from '~/models/container-request';
44 import { MountKind } from './models/mount-types';
45
46 const getBuildNumber = () => "BN-" + (process.env.REACT_APP_BUILD_NUMBER || "dev");
47 const getGitCommit = () => "GIT-" + (process.env.REACT_APP_GIT_COMMIT || "latest").substr(0, 7);
48 const getBuildInfo = () => getBuildNumber() + " / " + getGitCommit();
49
50 const buildInfo = getBuildInfo();
51
52 console.log(`Starting arvados [${buildInfo}]`);
53
54 addMenuActionSet(ContextMenuKind.ROOT_PROJECT, rootProjectActionSet);
55 addMenuActionSet(ContextMenuKind.PROJECT, projectActionSet);
56 addMenuActionSet(ContextMenuKind.RESOURCE, resourceActionSet);
57 addMenuActionSet(ContextMenuKind.FAVORITE, favoriteActionSet);
58 addMenuActionSet(ContextMenuKind.COLLECTION_FILES, collectionFilesActionSet);
59 addMenuActionSet(ContextMenuKind.COLLECTION_FILES_ITEM, collectionFilesItemActionSet);
60 addMenuActionSet(ContextMenuKind.COLLECTION, collectionActionSet);
61 addMenuActionSet(ContextMenuKind.COLLECTION_RESOURCE, collectionResourceActionSet);
62 addMenuActionSet(ContextMenuKind.TRASHED_COLLECTION, trashedCollectionActionSet);
63 addMenuActionSet(ContextMenuKind.PROCESS, processActionSet);
64 addMenuActionSet(ContextMenuKind.PROCESS_RESOURCE, processResourceActionSet);
65 addMenuActionSet(ContextMenuKind.TRASH, trashActionSet);
66
67 fetchConfig()
68     .then(({ config, apiHost }) => {
69         const history = createBrowserHistory();
70         const services = createServices(config, {
71             progressFn: (id, working) => {
72                 store.dispatch(progressIndicatorActions.TOGGLE_WORKING({ id, working }));
73             },
74             errorFn: (id, error) => {
75                 // console.error("Backend error:", error);
76                 // store.dispatch(snackbarActions.OPEN_SNACKBAR({ message: "Backend error", kind: SnackbarKind.ERROR }));
77             }
78         });
79         const store = configureStore(history, services);
80
81         store.subscribe(initListener(history, store, services, config));
82         store.dispatch(initAuth());
83         store.dispatch(setCurrentTokenDialogApiHost(apiHost));
84         store.dispatch(setUuidPrefix(config.uuidPrefix));
85
86         const TokenComponent = (props: any) => <ApiToken authService={services.authService} {...props} />;
87         const MainPanelComponent = (props: any) => <MainPanel buildInfo={buildInfo} {...props} />;
88
89         const App = () =>
90             <MuiThemeProvider theme={CustomTheme}>
91                 <Provider store={store}>
92                     <ConnectedRouter history={history}>
93                         <div>
94                             <Route path={Routes.TOKEN} component={TokenComponent} />
95                             <Route path={Routes.ROOT} component={MainPanelComponent} />
96                         </div>
97                     </ConnectedRouter>
98                 </Provider>
99             </MuiThemeProvider>;
100
101         ReactDOM.render(
102             <App />,
103             document.getElementById('root') as HTMLElement
104         );
105     });
106
107 const initListener = (history: History, store: RootStore, services: ServiceRepository, config: Config) => {
108     let initialized = false;
109     return async () => {
110         const { router, auth } = store.getState();
111         if (router.location && auth.user && !initialized) {
112             initialized = true;
113             initWebSocket(config, services.authService, store);
114             await store.dispatch(loadWorkbench());
115             addRouteChangeHandlers(history, store);
116         }
117     };
118 };
119
120
121 const createSampleProcess = ({ containerRequestService }: ServiceRepository) => {
122     containerRequestService.create({
123         ownerUuid: 'c97qk-j7d0g-s3ngc1z0748hsmf',
124         name: 'Simple process 7',
125         state: ContainerRequestState.COMMITTED,
126         mounts: {
127             '/var/spool/cwl': {
128                 kind: MountKind.COLLECTION,
129                 writable: true,
130             },
131             'stdout': {
132                 kind: MountKind.MOUNTED_FILE,
133                 path: '/var/spool/cwl/cwl.output.json'
134             },
135             '/var/lib/cwl/workflow.json': {
136                 kind: MountKind.JSON,
137                 content: {
138                     "cwlVersion": "v1.0",
139                     "$graph": [
140                         {
141                             "class": "CommandLineTool",
142                             "requirements": [
143                                 {
144                                   "listing": [
145                                     {
146                                       "entryname": "input_collector.log",
147                                       "entry": "$(inputs.single_file.basename)\n"
148                                     }
149                                   ],
150                                   "class": "InitialWorkDirRequirement"
151                                 }
152                               ],
153                             "inputs": [
154                                 {
155                                     "type": "File",
156                                     "id": "#input_collector.cwl/single_file"
157                                 }
158                             ],
159                             "outputs": [
160                                 {
161                                     "type": "File",
162                                     "outputBinding": {
163                                         "glob": "*"
164                                     },
165                                     "id": "#input_collector.cwl/output"
166                                 }
167                             ],
168                             "baseCommand": [
169                                 "echo"
170                             ],
171                             "id": "#input_collector.cwl"
172                         },
173                         {
174                             "class": "Workflow",
175                             "doc": "This is the description of the workflow",
176                             "inputs": [
177                                 {
178                                     "type": "File",
179                                     "label": "Single File",
180                                     "doc": "This should allow for single File selection only.",
181                                     "id": "#main/single_file"
182                                 }
183                             ],
184                             "outputs": [
185                                 {
186                                     "type": "File",
187                                     "outputSource": "#main/input_collector/output",
188                                     "id": "#main/log_file"
189                                 }
190                             ],
191                             "steps": [
192                                 {
193                                     "run": "#input_collector.cwl",
194                                     "in": [
195                                         {
196                                             "source": "#main/single_file",
197                                             "id": "#main/input_collector/single_file"
198                                         }
199                                     ],
200                                     "out": [
201                                         "#main/input_collector/output"
202                                     ],
203                                     "id": "#main/input_collector"
204                                 }
205                             ],
206                             "id": "#main"
207                         }
208                     ]
209                 },
210             },
211             '/var/lib/cwl/cwl.input.json': {
212                 kind: MountKind.JSON,
213                 content: {
214                     "single_file": {
215                         "class": "File",
216                         "location": "keep:233454526794c0a2d56a305baeff3d30+145/1.txt",
217                         "basename": "fileA"
218                       }
219                 },
220             }
221         },
222         runtimeConstraints: {
223             API: true,
224             vcpus: 1,
225             ram: 1073741824,
226         },
227         containerImage: 'arvados/jobs:1.1.4.20180618144723',
228         cwd: '/var/spool/cwl',
229         command: [
230             'arvados-cwl-runner',
231             '--local',
232             '--api=containers',
233             "--project-uuid=c97qk-j7d0g-s3ngc1z0748hsmf",
234             '/var/lib/cwl/workflow.json#main',
235             '/var/lib/cwl/cwl.input.json'
236         ],
237         outputPath: '/var/spool/cwl',
238         priority: 1,
239     });
240 };
241