Arvados-DCO-1.1-Signed-off-by: Sarah Wait Zaranek <swz@curii.com>
no issue #
+++ /dev/null
-reference:
- class: File
- location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
-fastq1:
- class: File
- location: keep:c96565a96cd428fe92bf70e97488bd80+21857/ERR1726424_1.fastq/ERR1726424_1.fastq.gz
-fastq2:
- class: File
- location: keep:0ea6e3aaa6ead18a2cc4ba67a22939e9+25007/ERR1726424_2.fastq/ERR1726424_2.fastq.gz
-sample: ERR1726424
reference:
class: File
location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
reference:
class: File
location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
gvcfdir:
class: Directory
location: keep:1da945b644da2182d010fb1b7745233f+2725
gvcfdir:
class: Directory
location: keep:1da945b644da2182d010fb1b7745233f+2725
+++ /dev/null
-bam:
- class: File
- location: keep:6e574d6e8eb051b5ab2554e088b39332+144/out.sorted.bam
-reference:
- class: File
- location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
+++ /dev/null
-gvcfdir:
- class: Directory
- location: keep:1da945b644da2182d010fb1b7745233f+2725
+ format: edam:format_1929
location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
fastqdir:
location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
fastqdir:
+ format: edam:format_3016
location: keep:242ba3b9049aee86ab2c72db4f3b2822+223/38/clinvar.vcf.gz
reportfunc:
location: keep:242ba3b9049aee86ab2c72db4f3b2822+223/38/clinvar.vcf.gz
reportfunc:
+ format: edam:format_2331
location: ../src/annotation/head.html
tailhtml:
class: File
location: ../src/annotation/head.html
tailhtml:
class: File
+ format: edam:format_2331
location: ../src/annotation/tail.html
scattercount: '32'
knownsites:
class: File
location: ../src/annotation/tail.html
scattercount: '32'
knownsites:
class: File
+ format: edam:format_3016
location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz
location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz