updating for metadata and yml to check command line cwl

[arvados-tutorial.git] / WGS-processing / yml / helper / gatk-baserecalibrator-with-interval.yml

diff --git a/WGS-processing/yml/helper/gatk-baserecalibrator.yml b/WGS-processing/yml/helper/gatk-baserecalibrator-with-interval.yml
similarity index 75%
rename from WGS-processing/yml/helper/gatk-baserecalibrator.yml
rename to WGS-processing/yml/helper/gatk-baserecalibrator-with-interval.yml
index d4b3c50a6ffa7ebaeb74c94f1d4c966a7a5452f6..7e6b16a9696b70aa713f604c4b96bcbac81873c5 100644 (file)
--- a/WGS-processing/yml/helper/gatk-baserecalibrator.yml
+++ b/WGS-processing/yml/helper/gatk-baserecalibrator-with-interval.yml
@@ -12,3 +12,6 @@ knownsites1:
   class: File
   location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz
 
   class: File
   location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz
 

+intervallist:
+  class: File
+  location: keep:4d4947f6637f0acec32580e09d991967+815/0000-scattered.interval_list