projects / arvados-tutorial.git / blobdiff
summary | shortlog | log | commit | commitdiff | tree
raw | inline | side by side
updating for metadata and yml to check command line cwl
[arvados-tutorial.git] / WGS-processing / yml / helper / gatk-baserecalibrator.yml
diff --git a/WGS-processing/yml/helper/gatk-baserecalibrator.yml b/WGS-processing/yml/helper/gatk-baserecalibrator.yml
deleted file mode 100644 (file)
index d4b3c50..0000000
--- a/WGS-processing/yml/helper/gatk-baserecalibrator.yml
+++ /dev/null
@@ -1,14 +0,0 @@
-bam:
-  class: File
-  location: keep:79407f4f0d46a44fcc9c377461ee85fc+53752/marked_dupsERR1726424.sorted.bam
-
-reference:
-  class: File
-  location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
-
-sample: ERR1726424
-
-knownsites1:
-  class: File
-  location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz
-