label: Report generation workflow
inputs:
- gvcf:
+ gvcf:
type: File
format: edam:format_3016 # GVCF
label: Gathered GVCF
label: Function used to create HTML report
headhtml:
type: File
- format: edam:format_2331# HTML
+ format: edam:format_2331 # HTML
label: Header for HTML report
- tailhtml:
+ tailhtml:
type: File
format: edam:format_2331 # HTML
label: Footer for HTML report
outputs:
report:
type: File
- format: edam:format_1964 # HTML
+ format: edam:format_2331 # HTML
label: ClinVar variant report
outputSource: generate-report/report
in:
reportfunc: reportfunc
sampletxt: annotate/reporttxt
+ sample: sample
headhtml: headhtml
tailhtml: tailhtml
out: [report]
s: https://schema.org/
edam: http://edamontology.org/
-$schemas:
- - https://schema.org/version/latest/schema.rdf
- - http://edamontology.org/EDAM_1.18.owl
+#$schemas:
+# - https://schema.org/version/latest/schema.rdf
+# - http://edamontology.org/EDAM_1.18.owl