reorg of yml files

[arvados-tutorial.git] / WGS-processing / yml / helper / scatter-gatk-wf-with-interval.yml

diff --git a/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml b/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml
new file mode 100644 (file)
index 0000000..4909ce2
--- /dev/null
+++ b/WGS-processing/yml/helper/scatter-gatk-wf-with-interval.yml
@@ -0,0 +1,11 @@
+bam:
+  class: File
+  location: keep:377c02de508dff9e4474f9a48d754933+53821/marked_dupsERR1726424.sorted.bam 
+reference:
+  class: File
+  location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
+sample: ERR1726424
+scattercount: '32'
+knownsites1:
+  class: File
+  location: keep:7c0b13bda857fa15d88c1039182f69d5+8052/Homo_sapiens_assembly38.known_indels.vcf.gz