Updating for proper loadListing

[arvados-tutorial.git] / RNA-Seq / README.md

diff --git a/RNA-Seq/README.md b/RNA-Seq/README.md
index 25677fd827945bc50407591ba46a3445fc323ab5..d4e3c22c2dd10314c833d6e3def48a8d4e8f0b67 100644 (file)
--- a/RNA-Seq/README.md
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@@ -5,9 +5,22 @@ Workflows are written in CWL v1.2. (https://www.commonwl.org/)
 Subdirectories are:
 * cwl - contains CWL code for the demo
 * yml - contains YML inputs for cwl demo code
-* docker - contains dockerfiles necessary to re-create any needed docker images 
 
 To run the workflow:
 
 *  arvados-cwl-runner --no-wait --project-uuid YOUR_PROJECT_UUID ./cwl/RNA-seq-wf.cwl ./yml/RNA-seq-wf.yml
 
+About the Demo:
+This demo is based on a workflow in the Introduction to RNA-seq using high-performance computing (HPC) lessons developed by members of the teaching team at the Harvard Chan Bioinformatics Core (HBC). The original training, which includes additional lectures about the biology of RNA-seq, can be found at here:https://github.com/hbctraining/Intro-to-rnaseq-hpc-O2. 
+
+The data used in this demo can be found here: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE50499. Citation: Kenny PJ, Zhou H, Kim M, Skariah G et al. MOV10 and FMRP regulate AGO2 association with microRNA recognition elements. Cell Rep 2014 Dec 11;9(5):1729-1741. PMID: 25464849
+
+Have questions about Arvados?
+* https://arvados.org/
+* https://gitter.im/arvados/community
+
+Have questions about CWL?
+* https://www.commonwl.org/
+* https://cwl.discourse.group/
+* https://gitter.im/common-workflow-language/common-workflow-language
+