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Updating yml for formats
[arvados-tutorial.git]
/
WGS-processing
/
cwl
/
wgs-processing-wf.cwl
diff --git
a/WGS-processing/cwl/wgs-processing-wf.cwl
b/WGS-processing/cwl/wgs-processing-wf.cwl
index 58e38cbf2d6453908bfb5b4c4564daa439996988..9459a3f619ed86188911f97c5825b2be4ef751e6 100644
(file)
--- a/
WGS-processing/cwl/wgs-processing-wf.cwl
+++ b/
WGS-processing/cwl/wgs-processing-wf.cwl
@@
-40,11
+40,11
@@
inputs:
label: Function used to create HTML report
headhtml:
type: File
label: Function used to create HTML report
headhtml:
type: File
- format: edam:format_
1964
# HTML
+ format: edam:format_
2331
# HTML
label: Header for HTML report
tailhtml:
type: File
label: Header for HTML report
tailhtml:
type: File
- format: edam:format_
1964
# HTML
+ format: edam:format_
2331
# HTML
label: Footer for HTML report
outputs:
label: Footer for HTML report
outputs:
@@
-53,7
+53,6
@@
outputs:
outputSource: bwamem-gatk-report/gvcf
format: edam:format_3016 # GVCF
label: GVCFs generated from GATK
outputSource: bwamem-gatk-report/gvcf
format: edam:format_3016 # GVCF
label: GVCFs generated from GATK
-
report:
type: File[]
outputSource: bwamem-gatk-report/report
report:
type: File[]
outputSource: bwamem-gatk-report/report
@@
-91,6
+90,6
@@
$namespaces:
s: https://schema.org/
edam: http://edamontology.org/
s: https://schema.org/
edam: http://edamontology.org/
-$schemas:
- - https://schema.org/version/latest/schema.rdf
- - http://edamontology.org/EDAM_1.18.owl
+
#
$schemas:
+
#
- https://schema.org/version/latest/schema.rdf
+
#
- http://edamontology.org/EDAM_1.18.owl