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Updating yml for formats
[arvados-tutorial.git]
/
WGS-processing
/
yml
/
helper
/
gatk-applyBQSR-with-interval.yml
diff --git
a/WGS-processing/yml/helper/gatk-applyBQSR-with-interval.yml
b/WGS-processing/yml/helper/gatk-applyBQSR-with-interval.yml
index 6259b09b9c075c788cc657ec7b7a0903e2eb6895..c992b4f2d539a629af038e8314259047135f3f7c 100644
(file)
--- a/
WGS-processing/yml/helper/gatk-applyBQSR-with-interval.yml
+++ b/
WGS-processing/yml/helper/gatk-applyBQSR-with-interval.yml
@@
-1,9
+1,11
@@
bam:
class: File
bam:
class: File
+ format: edam:format_2572
location: keep:79407f4f0d46a44fcc9c377461ee85fc+53752/marked_dupsERR1726424.sorted.bam
reference:
class: File
location: keep:79407f4f0d46a44fcc9c377461ee85fc+53752/marked_dupsERR1726424.sorted.bam
reference:
class: File
+ format: edam:format_1929
location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
sample: ERR1726424
location: keep:a3af04432df3d71d22f2fe8be549ba96+5974/hg38.fa
sample: ERR1726424