read -rd "\000" helpmessage <<EOF
-$(basename $0): Build Arvados packages and (optionally) upload them.
+$(basename $0): Build Arvados packages
Syntax:
WORKSPACE=/path/to/arvados $(basename $0) [options]
Options:
---upload Upload packages (default: false)
---scp-user USERNAME Scp user for apt server (only required when --upload is specified)
---apt-server HOSTNAME Apt server hostname (only required when --upload is specified)
---debug Output debug information (default: false)
+--build-bundle-packages (default: false)
+ Build api server and workbench packages with vendor/bundle included
+--debug
+ Output debug information (default: false)
+--target
+ Distribution to build packages for (default: debian7)
WORKSPACE=path Path to the Arvados source tree to build packages from
EOF
EXITCODE=0
-CALL_FREIGHT=0
-
-DEBUG=0
-UPLOAD=0
+DEBUG=${ARVADOS_DEBUG:-0}
+BUILD_BUNDLE_PACKAGES=0
+TARGET=debian7
+
+PARSEDOPTS=$(getopt --name "$0" --longoptions \
+ help,build-bundle-packages,debug,target: \
+ -- "" "$@")
+if [ $? -ne 0 ]; then
+ exit 1
+fi
-while [[ -n "$1" ]]
-do
- arg="$1"; shift
- case "$arg" in
+eval set -- "$PARSEDOPTS"
+while [ $# -gt 0 ]; do
+ case "$1" in
--help)
echo >&2 "$helpmessage"
echo >&2
exit 1
;;
- --scp-user)
- APTUSER="$1"; shift
- ;;
- --apt-server)
- APTSERVER="$1"; shift
+ --target)
+ TARGET="$2"; shift
;;
--debug)
DEBUG=1
;;
- --upload)
- UPLOAD=1
+ --build-bundle-packages)
+ BUILD_BUNDLE_PACKAGES=1
;;
- *)
- echo >&2 "$0: Unrecognized option: '$arg'. Try: $0 --help"
- exit 1
+ --)
+ if [ $# -gt 1 ]; then
+ echo >&2 "$0: unrecognized argument '$2'. Try: $0 --help"
+ exit 1
+ fi
;;
esac
+ shift
done
-# Sanity checks
-if [[ "$UPLOAD" != '0' && ("$APTUSER" == '' || "$APTSERVER" == '') ]]; then
- echo >&2 "$helpmessage"
- echo >&2
- echo >&2 "Error: please specify --scp-user and --apt-server if --upload is set"
- echo >&2
- exit 1
+STDOUT_IF_DEBUG=/dev/null
+STDERR_IF_DEBUG=/dev/null
+DASHQ_UNLESS_DEBUG=-q
+if [[ "$DEBUG" != 0 ]]; then
+ STDOUT_IF_DEBUG=/dev/stdout
+ STDERR_IF_DEBUG=/dev/stderr
+ DASHQ_UNLESS_DEBUG=
fi
-# Sanity check
+debug_echo () {
+ echo "$@" >"$STDOUT_IF_DEBUG"
+}
+
+declare -a PYTHON_BACKPORTS PYTHON3_BACKPORTS
+
+PYTHON2_VERSION=2.7
+PYTHON3_VERSION=$(python3 -c 'import sys; print("{v.major}.{v.minor}".format(v=sys.version_info))')
+
+case "$TARGET" in
+ debian7)
+ FORMAT=deb
+ PYTHON2_PACKAGE=python$PYTHON2_VERSION
+ PYTHON2_PKG_PREFIX=python
+ PYTHON3_PACKAGE=python$PYTHON3_VERSION
+ PYTHON3_PKG_PREFIX=python3
+ PYTHON_BACKPORTS=(python-gflags pyvcf google-api-python-client \
+ oauth2client pyasn1==0.1.7 pyasn1-modules==0.0.5 \
+ rsa uritemplate httplib2 ws4py \
+ virtualenv pykka apache-libcloud requests six pyexecjs jsonschema \
+ ciso8601 pycrypto backports.ssl_match_hostname pycurl llfuse)
+ PYTHON3_BACKPORTS=(docker-py six requests websocket-client)
+ ;;
+ debian8)
+ FORMAT=deb
+ PYTHON2_PACKAGE=python$PYTHON2_VERSION
+ PYTHON2_PKG_PREFIX=python
+ PYTHON3_PACKAGE=python$PYTHON3_VERSION
+ PYTHON3_PKG_PREFIX=python3
+ PYTHON_BACKPORTS=(python-gflags pyvcf google-api-python-client \
+ oauth2client pyasn1==0.1.7 pyasn1-modules==0.0.5 \
+ rsa uritemplate httplib2 ws4py \
+ virtualenv pykka apache-libcloud requests six pyexecjs jsonschema \
+ ciso8601 pycrypto backports.ssl_match_hostname pycurl llfuse)
+ PYTHON3_BACKPORTS=(docker-py six requests websocket-client)
+ ;;
+ ubuntu1204)
+ FORMAT=deb
+ PYTHON2_PACKAGE=python$PYTHON2_VERSION
+ PYTHON2_PKG_PREFIX=python
+ PYTHON3_PACKAGE=python$PYTHON3_VERSION
+ PYTHON3_PKG_PREFIX=python3
+ PYTHON_BACKPORTS=(python-gflags pyvcf google-api-python-client \
+ oauth2client pyasn1==0.1.7 pyasn1-modules==0.0.5 \
+ rsa uritemplate httplib2 ws4py \
+ virtualenv pykka apache-libcloud requests six pyexecjs jsonschema \
+ ciso8601 pycrypto backports.ssl_match_hostname pycurl llfuse)
+ PYTHON3_BACKPORTS=(docker-py six requests websocket-client)
+ ;;
+ ubuntu1404)
+ FORMAT=deb
+ PYTHON2_PACKAGE=python$PYTHON2_VERSION
+ PYTHON2_PKG_PREFIX=python
+ PYTHON3_PACKAGE=python$PYTHON3_VERSION
+ PYTHON3_PKG_PREFIX=python3
+ PYTHON_BACKPORTS=(pyasn1==0.1.7 pyvcf pyasn1-modules==0.0.5 llfuse ciso8601 \
+ google-api-python-client six uritemplate oauth2client httplib2 \
+ rsa apache-libcloud pycurl backports.ssl_match_hostname)
+ PYTHON3_BACKPORTS=(docker-py requests websocket-client)
+ ;;
+ centos6)
+ FORMAT=rpm
+ PYTHON2_PACKAGE=$(rpm -qf "$(which python$PYTHON2_VERSION)" --queryformat '%{NAME}\n')
+ PYTHON2_PKG_PREFIX=$PYTHON2_PACKAGE
+ PYTHON3_PACKAGE=$(rpm -qf "$(which python$PYTHON3_VERSION)" --queryformat '%{NAME}\n')
+ PYTHON3_PKG_PREFIX=$PYTHON3_PACKAGE
+ PYTHON_BACKPORTS=(python-gflags pyvcf google-api-python-client \
+ oauth2client pyasn1==0.1.7 pyasn1-modules==0.0.5 \
+ rsa uritemplate httplib2 ws4py \
+ pykka apache-libcloud requests six pyexecjs jsonschema \
+ ciso8601 pycrypto backports.ssl_match_hostname pycurl
+ python-daemon lockfile llfuse)
+ PYTHON3_BACKPORTS=(docker-py six requests)
+ export PYCURL_SSL_LIBRARY=nss
+ ;;
+ *)
+ echo -e "$0: Unknown target '$TARGET'.\n" >&2
+ exit 1
+ ;;
+esac
+
+
if ! [[ -n "$WORKSPACE" ]]; then
echo >&2 "$helpmessage"
echo >&2
exit 1
fi
-if ! easy_install3 --version >/dev/null; then
- cat >&2 <<EOF
+find_easy_install() {
+ for version_suffix in "$@"; do
+ if "easy_install$version_suffix" --version >/dev/null 2>&1; then
+ echo "easy_install$version_suffix"
+ return 0
+ fi
+ done
+ cat >&2 <<EOF
$helpmessage
-Error: easy_install3 (from python3-setuptools) not found
+Error: easy_install$1 (from Python setuptools module) not found
EOF
- exit 1
-fi
+ exit 1
+}
-if [[ "$DEBUG" != 0 ]]; then
- echo "Workspace is $WORKSPACE"
+EASY_INSTALL2=$(find_easy_install -$PYTHON2_VERSION "")
+EASY_INSTALL3=$(find_easy_install -$PYTHON3_VERSION 3)
+
+RUN_BUILD_PACKAGES_PATH="`dirname \"$0\"`"
+RUN_BUILD_PACKAGES_PATH="`( cd \"$RUN_BUILD_PACKAGES_PATH\" && pwd )`" # absolutized and normalized
+if [ -z "$RUN_BUILD_PACKAGES_PATH" ] ; then
+ # error; for some reason, the path is not accessible
+ # to the script (e.g. permissions re-evaled after suid)
+ exit 1 # fail
fi
+debug_echo "$0 is running from $RUN_BUILD_PACKAGES_PATH"
+debug_echo "Workspace is $WORKSPACE"
+
+format_last_commit_here() {
+ local format=$1; shift
+ TZ=UTC git log -n1 --first-parent "--format=format:$format" .
+}
+
version_from_git() {
# Generates a version number from the git log for the current working
# directory, and writes it to stdout.
local git_ts git_hash
- declare $(TZ=UTC git log -n1 --first-parent --max-count=1 \
- --format=format:"git_ts=%ct git_hash=%h" .)
+ declare $(format_last_commit_here "git_ts=%ct git_hash=%h")
echo "0.1.$(date -ud "@$git_ts" +%Y%m%d%H%M%S).$git_hash"
}
+nohash_version_from_git() {
+ version_from_git | cut -d. -f1-3
+}
+
timestamp_from_git() {
- # Generates a version number from the git log for the current working
- # directory, and writes it to stdout.
- local git_ts git_hash
- declare $(TZ=UTC git log -n1 --first-parent --max-count=1 \
- --format=format:"git_ts=%ct git_hash=%h" .)
- echo "$git_ts"
+ format_last_commit_here "%ct"
}
handle_python_package () {
# This function assumes the current working directory is the python package directory
- if [[ "$UPLOAD" != 0 ]]; then
- # Make sure only to use sdist - that's the only format pip can deal with (sigh)
- if [[ "$DEBUG" != 0 ]]; then
- python setup.py sdist upload
- else
- python setup.py -q sdist upload
- fi
- else
- # Make sure only to use sdist - that's the only format pip can deal with (sigh)
- if [[ "$DEBUG" != 0 ]]; then
- python setup.py sdist
- else
- python setup.py -q sdist
- fi
+ if [ -n "$(find dist -name "*-$(nohash_version_from_git).tar.gz" -print -quit)" ]; then
+ # This package doesn't need rebuilding.
+ return
fi
+ # Make sure only to use sdist - that's the only format pip can deal with (sigh)
+ python setup.py $DASHQ_UNLESS_DEBUG sdist
}
-# Build debs for everything
-build_and_scp_deb () {
+handle_ruby_gem() {
+ local gem_name=$1; shift
+ local gem_version=$(nohash_version_from_git)
+ local gem_src_dir="$(pwd)"
+
+ if ! [[ -e "${gem_name}-${gem_version}.gem" ]]; then
+ find -maxdepth 1 -name "${gem_name}-*.gem" -delete
+
+ # -q appears to be broken in gem version 2.2.2
+ $GEM build "$gem_name.gemspec" $DASHQ_UNLESS_DEBUG >"$STDOUT_IF_DEBUG" 2>"$STDERR_IF_DEBUG"
+ fi
+}
+
+# Build packages for everything
+fpm_build () {
# The package source. Depending on the source type, this can be a
# path, or the name of the package in an upstream repository (e.g.,
# pip).
# The type of source package. Passed to fpm -s. Default "python".
PACKAGE_TYPE=${1:-python}
shift
-
- if [ "python3" = "$PACKAGE_TYPE" ]; then
- # fpm does not actually support this package type. Instead we recognize
- # it as a convenience shortcut to add several necessary arguments to
- # fpm's command line later.
- PACKAGE_TYPE=python
- set -- "$@" --python-bin python3 --python-easyinstall easy_install3 \
- --python-package-name-prefix python3
- fi
# Optional: the package version number. Passed to fpm -v.
VERSION=$1
shift
- declare -a COMMAND_ARR=("fpm" "--maintainer=Ward Vandewege <ward@curoverse.com>" "-s" "$PACKAGE_TYPE" "-t" "deb" "-x" "usr/local/lib/python2.7/dist-packages/tests")
+ case "$PACKAGE_TYPE" in
+ python)
+ # All Arvados Python2 packages depend on Python 2.7.
+ # Make sure we build with that for consistency.
+ set -- "$@" --python-bin python2.7 \
+ --python-easyinstall "$EASY_INSTALL2" \
+ --python-package-name-prefix "$PYTHON2_PKG_PREFIX" \
+ --depends "$PYTHON2_PACKAGE"
+ ;;
+ python3)
+ # fpm does not actually support a python3 package type. Instead
+ # we recognize it as a convenience shortcut to add several
+ # necessary arguments to fpm's command line later, after we're
+ # done handling positional arguments.
+ PACKAGE_TYPE=python
+ set -- "$@" --python-bin python3 \
+ --python-easyinstall "$EASY_INSTALL3" \
+ --python-package-name-prefix "$PYTHON3_PKG_PREFIX" \
+ --depends "$PYTHON3_PACKAGE"
+ ;;
+ esac
+
+ declare -a COMMAND_ARR=("fpm" "--maintainer=Ward Vandewege <ward@curoverse.com>" "-s" "$PACKAGE_TYPE" "-t" "$FORMAT")
+ if [ python = "$PACKAGE_TYPE" ]; then
+ COMMAND_ARR+=(--exclude=\*/{dist,site}-packages/tests/\*)
+ fi
if [[ "$PACKAGE_NAME" != "$PACKAGE" ]]; then
COMMAND_ARR+=('-n' "$PACKAGE_NAME")
COMMAND_ARR+=("$i")
done
+ # Append --depends X and other arguments specified by fpm-info.sh in
+ # the package source dir. These are added last so they can override
+ # the arguments added by this script.
+ declare -a fpm_args=()
+ declare -a fpm_depends=()
+ if [[ -d "$PACKAGE" ]]; then
+ FPM_INFO="$PACKAGE/fpm-info.sh"
+ else
+ FPM_INFO="${WORKSPACE}/backports/${PACKAGE_TYPE}-${PACKAGE}/fpm-info.sh"
+ fi
+ if [[ -e "$FPM_INFO" ]]; then
+ debug_echo "Loading fpm overrides from $FPM_INFO"
+ source "$FPM_INFO"
+ fi
+ for i in "${fpm_depends[@]}"; do
+ COMMAND_ARR+=('--depends' "$i")
+ done
+ COMMAND_ARR+=("${fpm_args[@]}")
+
COMMAND_ARR+=("$PACKAGE")
- if [[ "$DEBUG" != 0 ]]; then
- echo
- echo "${COMMAND_ARR[@]}"
- echo
- fi
+ debug_echo -e "\n${COMMAND_ARR[@]}\n"
FPM_RESULTS=$("${COMMAND_ARR[@]}")
FPM_EXIT_CODE=$?
+ fpm_verify $FPM_EXIT_CODE $FPM_RESULTS
+}
+
+# verify build results
+fpm_verify () {
+ FPM_EXIT_CODE=$1
+ shift
+ FPM_RESULTS=$@
+
FPM_PACKAGE_NAME=''
- if [[ $FPM_RESULTS =~ ([A-Za-z0-9_\-.]*\.deb) ]]; then
- FPM_PACKAGE_NAME=${BASH_REMATCH[1]}
+ if [[ $FPM_RESULTS =~ ([A-Za-z0-9_\.-]*\.)(deb|rpm) ]]; then
+ FPM_PACKAGE_NAME=${BASH_REMATCH[1]}${BASH_REMATCH[2]}
fi
if [[ "$FPM_PACKAGE_NAME" == "" ]]; then
echo
echo $FPM_RESULTS
echo
- else
- if [[ ! $FPM_RESULTS =~ "File already exists" ]]; then
- if [[ "$FPM_EXIT_CODE" != "0" ]]; then
- echo "Error building debian package for $1:\n $FPM_RESULTS"
- else
- if [[ "$UPLOAD" != 0 ]]; then
- scp -P2222 $FPM_PACKAGE_NAME $APTUSER@$APTSERVER:tmp/
- CALL_FREIGHT=1
- fi
- fi
- else
- echo "Debian package $FPM_PACKAGE_NAME exists, not rebuilding"
- fi
+ elif [[ "$FPM_RESULTS" =~ "File already exists" ]]; then
+ echo "Package $FPM_PACKAGE_NAME exists, not rebuilding"
+ elif [[ 0 -ne "$FPM_EXIT_CODE" ]]; then
+ echo "Error building package for $1:\n $FPM_RESULTS"
fi
}
if [[ -f /etc/profile.d/rvm.sh ]]; then
- source /etc/profile.d/rvm.sh
+ source /etc/profile.d/rvm.sh
+ GEM="rvm-exec default gem"
+else
+ GEM=gem
fi
# Make all files world-readable -- jenkins runs with umask 027, and has checked
# gems and packages
umask 0022
-if [[ "$DEBUG" != 0 ]]; then
- echo "umask is" `umask`
-fi
+debug_echo "umask is" `umask`
-# Perl packages
-if [[ "$DEBUG" != 0 ]]; then
- echo -e "\nPerl packages\n"
+if [[ ! -d "$WORKSPACE/packages/$TARGET" ]]; then
+ mkdir -p $WORKSPACE/packages/$TARGET
fi
-if [[ "$DEBUG" != 0 ]]; then
- PERL_OUT=/dev/stdout
-else
- PERL_OUT=/dev/null
-fi
+# Perl packages
+debug_echo -e "\nPerl packages\n"
cd "$WORKSPACE/sdk/perl"
if [[ -e Makefile ]]; then
- make realclean >"$PERL_OUT"
+ make realclean >"$STDOUT_IF_DEBUG"
fi
-find -maxdepth 1 \( -name 'MANIFEST*' -or -name 'libarvados-perl_*.deb' \) \
+find -maxdepth 1 \( -name 'MANIFEST*' -or -name "libarvados-perl*.$FORMAT" \) \
-delete
rm -rf install
-perl Makefile.PL >"$PERL_OUT" && \
- make install PREFIX=install INSTALLDIRS=perl >"$PERL_OUT" && \
- build_and_scp_deb install/=/usr libarvados-perl "Curoverse, Inc." dir \
- "$(version_from_git)"
+perl Makefile.PL INSTALL_BASE=install >"$STDOUT_IF_DEBUG" && \
+ make install INSTALLDIRS=perl >"$STDOUT_IF_DEBUG" && \
+ fpm_build install/lib/=/usr/share libarvados-perl \
+ "Curoverse, Inc." dir "$(version_from_git)" install/man/=/usr/share/man && \
+ mv libarvados-perl*.$FORMAT "$WORKSPACE/packages/$TARGET/"
# Ruby gems
-if [[ "$DEBUG" != 0 ]]; then
- echo
- echo "Ruby gems"
- echo
-fi
+debug_echo -e "\nRuby gems\n"
-if type rvm-exec 2>/dev/null; then
- FPM_GEM_PREFIX=$(rvm-exec system gem environment gemdir)
-else
- FPM_GEM_PREFIX=$(gem environment gemdir)
-fi
+FPM_GEM_PREFIX=$($GEM environment gemdir)
-cd "$WORKSPACE"
-cd sdk/ruby
-# clean up old packages
-find -maxdepth 1 \( -name 'arvados-*.gem' -or -name 'rubygem-arvados_*.deb' \) \
- -delete
+cd "$WORKSPACE/sdk/ruby"
+handle_ruby_gem arvados
-if [[ "$DEBUG" != 0 ]]; then
- gem build arvados.gemspec
-else
- # -q appears to be broken in gem version 2.2.2
- gem build arvados.gemspec -q >/dev/null
-fi
+cd "$WORKSPACE/sdk/cli"
+handle_ruby_gem arvados-cli
-if [[ "$UPLOAD" != 0 ]]; then
- # publish new gem
- gem push arvados-*gem
-fi
-
-build_and_scp_deb arvados-*.gem "" "Curoverse, Inc." gem "" \
- --prefix "$FPM_GEM_PREFIX"
-
-# Build arvados-cli GEM
-cd "$WORKSPACE"
-cd sdk/cli
-# clean up old gems
-rm -f arvados-cli*gem
-
-if [[ "$DEBUG" != 0 ]]; then
- gem build arvados-cli.gemspec
-else
- # -q appears to be broken in gem version 2.2.2
- gem build arvados-cli.gemspec -q >/dev/null
-fi
-
-if [[ "$UPLOAD" != 0 ]]; then
- # publish new gem
- gem push arvados-cli*gem
-fi
+cd "$WORKSPACE/services/login-sync"
+handle_ruby_gem arvados-login-sync
# Python packages
-if [[ "$DEBUG" != 0 ]]; then
- echo
- echo "Python packages"
- echo
-fi
+debug_echo -e "\nPython packages\n"
-cd "$WORKSPACE"
+cd "$WORKSPACE/sdk/pam"
+handle_python_package
-cd sdk/python
+cd "$WORKSPACE/sdk/python"
handle_python_package
-cd ../../services/fuse
+cd "$WORKSPACE/services/fuse"
handle_python_package
-cd ../../services/nodemanager
+cd "$WORKSPACE/services/nodemanager"
handle_python_package
-if [[ ! -d "$WORKSPACE/debs" ]]; then
- mkdir -p $WORKSPACE/debs
-fi
+# arvados-src
+(
+ set -e
-# Arvados-src
-# We use $WORKSPACE/src-build-dir as the clean directory from which to build the src package
-if [[ ! -d "$WORKSPACE/src-build-dir" ]]; then
- mkdir "$WORKSPACE/src-build-dir"
- cd "$WORKSPACE"
- if [[ "$DEBUG" != 0 ]]; then
- git clone https://github.com/curoverse/arvados.git src-build-dir
- else
- git clone -q https://github.com/curoverse/arvados.git src-build-dir
- fi
-fi
+ cd "$WORKSPACE"
+ COMMIT_HASH=$(format_last_commit_here "%H")
-cd "$WORKSPACE/src-build-dir"
-# just in case, check out master
-if [[ "$DEBUG" != 0 ]]; then
- git checkout master
- git pull
- # go into detached-head state
- git checkout `git log --format=format:%h -n1 .`
-else
- git checkout -q master
- git pull -q
- # go into detached-head state
- git checkout -q `git log --format=format:%h -n1 .`
-fi
+ SRC_BUILD_DIR=$(mktemp -d)
+ git clone $DASHQ_UNLESS_DEBUG "$WORKSPACE/.git" "$SRC_BUILD_DIR"
+ cd "$SRC_BUILD_DIR"
-# Build arvados src deb package
-cd "$WORKSPACE"
-PKG_VERSION=$(version_from_git)
-cd $WORKSPACE/debs
-build_and_scp_deb $WORKSPACE/src-build-dir/=/usr/local/arvados/src arvados-src 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--exclude=usr/local/arvados/src/.git" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=The Arvados source code" "--architecture=all"
+ # go into detached-head state
+ git checkout $DASHQ_UNLESS_DEBUG "$COMMIT_HASH"
+ echo "$COMMIT_HASH" >git-commit.version
-# clean up, check out master and step away from detached-head state
-cd "$WORKSPACE/src-build-dir"
-if [[ "$DEBUG" != 0 ]]; then
- git checkout master
-else
- git checkout -q master
-fi
+ cd "$SRC_BUILD_DIR"
+ PKG_VERSION=$(version_from_git)
+ cd $WORKSPACE/packages/$TARGET
+ fpm_build $SRC_BUILD_DIR/=/usr/local/arvados/src arvados-src 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--exclude=usr/local/arvados/src/.git" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=The Arvados source code" "--architecture=all"
+
+ rm -r "$SRC_BUILD_DIR"
+)
# Keep
export GOPATH=$(mktemp -d)
cd "$GOPATH/src/git.curoverse.com/arvados.git/services/keepstore"
PKG_VERSION=$(version_from_git)
go get "git.curoverse.com/arvados.git/services/keepstore"
-cd $WORKSPACE/debs
-build_and_scp_deb $GOPATH/bin/keepstore=/usr/bin/keepstore keepstore 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Keepstore is the Keep storage daemon, accessible to clients on the LAN"
+cd $WORKSPACE/packages/$TARGET
+fpm_build $GOPATH/bin/keepstore=/usr/bin/keepstore keepstore 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Keepstore is the Keep storage daemon, accessible to clients on the LAN"
# Get GO SDK version
cd "$GOPATH/src/git.curoverse.com/arvados.git/sdk/go"
fi
go get "git.curoverse.com/arvados.git/services/keepproxy"
-cd $WORKSPACE/debs
-build_and_scp_deb $GOPATH/bin/keepproxy=/usr/bin/keepproxy keepproxy 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Keepproxy makes a Keep cluster accessible to clients that are not on the LAN"
+cd $WORKSPACE/packages/$TARGET
+fpm_build $GOPATH/bin/keepproxy=/usr/bin/keepproxy keepproxy 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Keepproxy makes a Keep cluster accessible to clients that are not on the LAN"
# datamanager
cd "$GOPATH/src/git.curoverse.com/arvados.git/services/datamanager"
fi
go get "git.curoverse.com/arvados.git/services/datamanager"
-cd $WORKSPACE/debs
-build_and_scp_deb $GOPATH/bin/datamanager=/usr/bin/arvados-data-manager arvados-data-manager 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Datamanager ensures block replication levels, reports on disk usage and determines which blocks should be deleted when space is needed."
+cd $WORKSPACE/packages/$TARGET
+fpm_build $GOPATH/bin/datamanager=/usr/bin/arvados-data-manager arvados-data-manager 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Datamanager ensures block replication levels, reports on disk usage and determines which blocks should be deleted when space is needed."
# arv-git-httpd
cd "$GOPATH/src/git.curoverse.com/arvados.git/services/arv-git-httpd"
fi
go get "git.curoverse.com/arvados.git/services/arv-git-httpd"
-cd $WORKSPACE/debs
-build_and_scp_deb $GOPATH/bin/arv-git-httpd=/usr/bin/arvados-git-httpd arvados-git-httpd 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Provides authenticated http access to Arvados-hosted git repositories."
+cd $WORKSPACE/packages/$TARGET
+fpm_build $GOPATH/bin/arv-git-httpd=/usr/bin/arvados-git-httpd arvados-git-httpd 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Provides authenticated http access to Arvados-hosted git repositories."
# crunchstat
cd "$GOPATH/src/git.curoverse.com/arvados.git/services/crunchstat"
PKG_VERSION=$(version_from_git)
go get "git.curoverse.com/arvados.git/services/crunchstat"
-cd $WORKSPACE/debs
-build_and_scp_deb $GOPATH/bin/crunchstat=/usr/bin/crunchstat crunchstat 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Crunchstat gathers cpu/memory/network statistics of running Crunch jobs"
+cd $WORKSPACE/packages/$TARGET
+fpm_build $GOPATH/bin/crunchstat=/usr/bin/crunchstat crunchstat 'Curoverse, Inc.' 'dir' "$PKG_VERSION" "--url=https://arvados.org" "--license=GNU Affero General Public License, version 3.0" "--description=Crunchstat gathers cpu/memory/network statistics of running Crunch jobs"
# The Python SDK
# Please resist the temptation to add --no-python-fix-name to the fpm call here
# prefix from only one of the dependencies of a package... Maybe I could
# whip up a patch and send it upstream, but that will be for another day. Ward,
# 2014-05-15
-cd $WORKSPACE/debs
-# Python version numbering is obscure. Strip dashes and replace them with dots
-# to match our other version numbers. Cf. commit 4afcb8c, compliance with PEP-440.
-build_and_scp_deb $WORKSPACE/sdk/python python-arvados-python-client 'Curoverse, Inc.' 'python' "$(awk '($1 == "Version:"){ gsub(/-/,".",$2); print $2 }' $WORKSPACE/sdk/python/arvados_python_client.egg-info/PKG-INFO)" "--url=https://arvados.org" "--description=The Arvados Python SDK"
+cd $WORKSPACE/packages/$TARGET
+rm -rf "$WORKSPACE/sdk/python/build"
+fpm_build $WORKSPACE/sdk/python "${PYTHON2_PKG_PREFIX}-arvados-python-client" 'Curoverse, Inc.' 'python' "$(awk '($1 == "Version:"){print $2}' $WORKSPACE/sdk/python/arvados_python_client.egg-info/PKG-INFO)" "--url=https://arvados.org" "--description=The Arvados Python SDK" --deb-recommends=git
+
+# The PAM module
+if [[ $TARGET =~ debian|ubuntu ]]; then
+ cd $WORKSPACE/packages/$TARGET
+ rm -rf "$WORKSPACE/sdk/pam/build"
+ fpm_build $WORKSPACE/sdk/pam libpam-arvados 'Curoverse, Inc.' 'python' "$(awk '($1 == "Version:"){print $2}' $WORKSPACE/sdk/pam/arvados_pam.egg-info/PKG-INFO)" "--url=https://arvados.org" "--description=PAM module for authenticating shell logins using Arvados API tokens" --depends libpam-python
+fi
# The FUSE driver
# Please see comment about --no-python-fix-name above; we stay consistent and do
# not omit the python- prefix first.
-cd $WORKSPACE/debs
-# Python version numbering is obscure. Strip dashes and replace them with dots
-# to match our other version numbers. Cf. commit 4afcb8c, compliance with PEP-440.
-build_and_scp_deb $WORKSPACE/services/fuse python-arvados-fuse 'Curoverse, Inc.' 'python' "$(awk '($1 == "Version:"){ gsub(/-/,".",$2); print $2 }' $WORKSPACE/services/fuse/arvados_fuse.egg-info/PKG-INFO)" "--url=https://arvados.org" "--description=The Keep FUSE driver"
+cd $WORKSPACE/packages/$TARGET
+rm -rf "$WORKSPACE/services/fuse/build"
+fpm_build $WORKSPACE/services/fuse "${PYTHON2_PKG_PREFIX}-arvados-fuse" 'Curoverse, Inc.' 'python' "$(awk '($1 == "Version:"){print $2}' $WORKSPACE/services/fuse/arvados_fuse.egg-info/PKG-INFO)" "--url=https://arvados.org" "--description=The Keep FUSE driver"
# The node manager
-cd $WORKSPACE/debs
-# Python version numbering is obscure. Strip dashes and replace them with dots
-# to match our other version numbers. Cf. commit 4afcb8c, compliance with PEP-440.
-build_and_scp_deb $WORKSPACE/services/nodemanager arvados-node-manager 'Curoverse, Inc.' 'python' "$(awk '($1 == "Version:"){ gsub(/-/,".",$2); print $2}' $WORKSPACE/services/nodemanager/arvados_node_manager.egg-info/PKG-INFO)" "--url=https://arvados.org" "--description=The Arvados node manager"
+cd $WORKSPACE/packages/$TARGET
+rm -rf "$WORKSPACE/services/nodemanager/build"
+fpm_build $WORKSPACE/services/nodemanager arvados-node-manager 'Curoverse, Inc.' 'python' "$(awk '($1 == "Version:"){print $2}' $WORKSPACE/services/nodemanager/arvados_node_manager.egg-info/PKG-INFO)" "--url=https://arvados.org" "--description=The Arvados node manager"
# The Docker image cleaner
-cd $WORKSPACE/debs
-build_and_scp_deb $WORKSPACE/services/dockercleaner arvados-docker-cleaner 'Curoverse, Inc.' 'python3' "$(awk '($1 == "Version:"){print $2}' $WORKSPACE/services/dockercleaner/arvados_docker_cleaner.egg-info/PKG-INFO)" "--url=https://arvados.org" "--description=The Arvados Docker image cleaner"
+cd $WORKSPACE/packages/$TARGET
+rm -rf "$WORKSPACE/services/dockercleaner/build"
+fpm_build $WORKSPACE/services/dockercleaner arvados-docker-cleaner 'Curoverse, Inc.' 'python3' "$(awk '($1 == "Version:"){print $2}' $WORKSPACE/services/dockercleaner/arvados_docker_cleaner.egg-info/PKG-INFO)" "--url=https://arvados.org" "--description=The Arvados Docker image cleaner"
# A few dependencies
-for deppkg in python-gflags pyvcf google-api-python-client oauth2client \
- pyasn1 pyasn1-modules rsa uritemplate httplib2 ws4py virtualenv \
- pykka apache-libcloud requests six pyexecjs jsonschema ciso8601 \
- pycrypto backports.ssl_match_hostname; do
- build_and_scp_deb "$deppkg"
+for deppkg in "${PYTHON_BACKPORTS[@]}"; do
+ outname=$(echo "$deppkg" | sed -e 's/^python-//' -e 's/[<=>].*//' -e 's/_/-/g' -e "s/^/${PYTHON2_PKG_PREFIX}-/")
+ fpm_build "$deppkg" "$outname"
done
-build_and_scp_deb docker-py python3-docker-py python3
-
-# cwltool from common-workflow-language. We use this in arv-run-pipeline-instance.
-# We use $WORKSPACE/common-workflow-language as the clean directory from which to build the cwltool package
-if [[ ! -d "$WORKSPACE/common-workflow-language" ]]; then
- mkdir "$WORKSPACE/common-workflow-language"
- cd "$WORKSPACE"
- if [[ "$DEBUG" != 0 ]]; then
- git clone https://github.com/common-workflow-language/common-workflow-language.git common-workflow-language
- else
- git clone -q https://github.com/common-workflow-language/common-workflow-language.git common-workflow-language
- fi
+
+# Python 3 dependencies
+for deppkg in "${PYTHON3_BACKPORTS[@]}"; do
+ outname=$(echo "$deppkg" | sed -e 's/^python-//' -e 's/[<=>].*//' -e 's/_/-/g' -e "s/^/${PYTHON3_PKG_PREFIX}-/")
+ # The empty string is the vendor argument: these aren't Curoverse software.
+ fpm_build "$deppkg" "$outname" "" python3
+done
+
+# Build the API server package
+
+cd "$WORKSPACE/services/api"
+
+API_VERSION=$(version_from_git)
+PACKAGE_NAME=arvados-api-server
+
+if [[ ! -d "$WORKSPACE/services/api/tmp" ]]; then
+ mkdir $WORKSPACE/services/api/tmp
fi
-cd "$WORKSPACE/common-workflow-language"
-if [[ "$DEBUG" != 0 ]]; then
- git checkout master
- git pull
-else
- git checkout -q master
- git pull -q
+
+bundle install --path vendor/bundle >"$STDOUT_IF_DEBUG"
+
+/usr/bin/git rev-parse HEAD > git-commit.version
+
+cd $WORKSPACE/packages/$TARGET
+
+# Annoyingly, we require a database.yml file for rake assets:precompile to work. So for now,
+# we do that in the upgrade script.
+# TODO: add bogus database.yml file so we can precompile the assets and put them in the
+# package. Then remove that database.yml file again. It has to be a valid file though.
+#RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake assets:precompile
+
+# This is the complete package with vendor/bundle included.
+# It's big, so we do not build it by default.
+if [[ "$BUILD_BUNDLE_PACKAGES" != 0 ]]; then
+ declare -a COMMAND_ARR=("fpm" "--maintainer=Ward Vandewege <ward@curoverse.com>" "--vendor='Curoverse, Inc.'" "--url='https://arvados.org'" "--description='Arvados API server - Arvados is a free and open source platform for big data science.'" "--license='GNU Affero General Public License, version 3.0'" "-s" "dir" "-t" "$FORMAT" "-n" "${PACKAGE_NAME}-with-bundle" "-v" "$API_VERSION" "-x" "var/www/arvados-api/current/tmp" "-x" "var/www/arvados-api/current/log" "-x" "var/www/arvados-api/current/vendor/cache/*" "-x" "var/www/arvados-api/current/coverage" "-x" "var/www/arvados-api/current/Capfile*" "-x" "var/www/arvados-api/current/config/deploy*" "--after-install=$RUN_BUILD_PACKAGES_PATH/arvados-api-server-extras/postinst.sh" "$WORKSPACE/services/api/=/var/www/arvados-api/current" "$RUN_BUILD_PACKAGES_PATH/arvados-api-server-extras/arvados-api-server-upgrade.sh=/usr/local/bin/arvados-api-server-upgrade.sh")
+
+ debug_echo -e "\n${COMMAND_ARR[@]}\n"
+
+ FPM_RESULTS=$("${COMMAND_ARR[@]}")
+ FPM_EXIT_CODE=$?
+ fpm_verify $FPM_EXIT_CODE $FPM_RESULTS
fi
-cd reference
-handle_python_package
-CWLTOOL_VERSION=`git log --first-parent --max-count=1 --format='format:0.1.%ct.%h'`
+# Build the 'bare' package without vendor/bundle.
+declare -a COMMAND_ARR=("fpm" "--maintainer=Ward Vandewege <ward@curoverse.com>" "--vendor='Curoverse, Inc.'" "--url='https://arvados.org'" "--description='Arvados API server - Arvados is a free and open source platform for big data science.'" "--license='GNU Affero General Public License, version 3.0'" "-s" "dir" "-t" "$FORMAT" "-n" "${PACKAGE_NAME}" "-v" "$API_VERSION" "-x" "var/www/arvados-api/current/tmp" "-x" "var/www/arvados-api/current/log" "-x" "var/www/arvados-api/current/vendor/bundle" "-x" "var/www/arvados-api/current/vendor/cache/*" "-x" "var/www/arvados-api/current/coverage" "-x" "var/www/arvados-api/current/Capfile*" "-x" "var/www/arvados-api/current/config/deploy*" "--after-install=$RUN_BUILD_PACKAGES_PATH/arvados-api-server-extras/postinst.sh" "$WORKSPACE/services/api/=/var/www/arvados-api/current" "$RUN_BUILD_PACKAGES_PATH/arvados-api-server-extras/arvados-api-server-upgrade.sh=/usr/local/bin/arvados-api-server-upgrade.sh")
-# Build cwltool package
-cd $WORKSPACE/debs
-# Python version numbering is obscure. Strip dashes and replace them with dots
-# to match our other version numbers. Cf. commit 4afcb8c, compliance with PEP-440.
-build_and_scp_deb $WORKSPACE/common-workflow-language/reference cwltool 'Common Workflow Language Working Group' 'python' "$(awk '($1 == "Version:"){ gsub(/-/,".",$2); print $2 }' $WORKSPACE/common-workflow-language/reference/cwltool.egg-info/PKG-INFO)"
+debug_echo -e "\n${COMMAND_ARR[@]}\n"
-# Finally, publish the packages, if necessary
-if [[ "$UPLOAD" != 0 && "$CALL_FREIGHT" != 0 ]]; then
- ssh -p2222 $APTUSER@$APTSERVER -t "cd tmp && ls -laF *deb && freight add *deb apt/wheezy && freight cache && rm -f *deb"
-else
- if [[ "$UPLOAD" != 0 ]]; then
- echo "No new packages generated. No freight run necessary."
- fi
+FPM_RESULTS=$("${COMMAND_ARR[@]}")
+FPM_EXIT_CODE=$?
+fpm_verify $FPM_EXIT_CODE $FPM_RESULTS
+
+# API server package build done
+
+# Build the workbench server package
+
+cd "$WORKSPACE/apps/workbench"
+
+WORKBENCH_VERSION=$(version_from_git)
+PACKAGE_NAME=arvados-workbench
+
+if [[ ! -d "$WORKSPACE/apps/workbench/tmp" ]]; then
+ mkdir $WORKSPACE/apps/workbench/tmp
fi
+bundle install --path vendor/bundle >"$STDOUT_IF_DEBUG"
+
+/usr/bin/git rev-parse HEAD > git-commit.version
+
+# clear the tmp directory; the asset generation step will recreate tmp/cache/assets,
+# and we want that in the package, so it's easier to not exclude the tmp directory
+# from the package - empty it instead.
+rm -rf $WORKSPACE/apps/workbench/tmp/*
+
+# Set up application.yml and production.rb so that asset precompilation works
+\cp config/application.yml.example config/application.yml -f
+\cp config/environments/production.rb.example config/environments/production.rb -f
+sed -i 's/secret_token: ~/secret_token: xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx/' config/application.yml
+
+RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake assets:precompile >/dev/null
+
+if [[ "$?" != "0" ]]; then
+ echo "ERROR: Asset precompilation failed"
+ EXITCODE=1
+fi
+
+cd $WORKSPACE/packages/$TARGET
+
+# This is the complete package with vendor/bundle included.
+# It's big, so we do not build it by default.
+if [[ "$BUILD_BUNDLE_PACKAGES" != 0 ]]; then
+
+ declare -a COMMAND_ARR=("fpm" "--maintainer=Ward Vandewege <ward@curoverse.com>" "--vendor='Curoverse, Inc.'" "--url='https://arvados.org'" "--description='Arvados Workbench - Arvados is a free and open source platform for big data science.'" "--license='GNU Affero General Public License, version 3.0'" "-s" "dir" "-t" "$FORMAT" "-n" "${PACKAGE_NAME}-with-bundle" "-v" "$WORKBENCH_VERSION" "-x" "var/www/arvados-workbench/current/log" "-x" "var/www/arvados-workbench/current/vendor/cache/*" "-x" "var/www/arvados-workbench/current/coverage" "-x" "var/www/arvados-workbench/current/Capfile*" "-x" "var/www/arvados-workbench/current/config/deploy*" "--after-install=$RUN_BUILD_PACKAGES_PATH/arvados-workbench-extras/postinst.sh" "$WORKSPACE/apps/workbench/=/var/www/arvados-workbench/current" "$RUN_BUILD_PACKAGES_PATH/arvados-workbench-extras/arvados-workbench-upgrade.sh=/usr/local/bin/arvados-workbench-upgrade.sh")
+
+ debug_echo -e "\n${COMMAND_ARR[@]}\n"
+
+ FPM_RESULTS=$("${COMMAND_ARR[@]}")
+ FPM_EXIT_CODE=$?
+ fpm_verify $FPM_EXIT_CODE $FPM_RESULTS
+fi
+
+# Build the 'bare' package without vendor/bundle.
+
+declare -a COMMAND_ARR=("fpm" "--maintainer=Ward Vandewege <ward@curoverse.com>" "--vendor='Curoverse, Inc.'" "--url='https://arvados.org'" "--description='Arvados Workbench - Arvados is a free and open source platform for big data science.'" "--license='GNU Affero General Public License, version 3.0'" "-s" "dir" "-t" "$FORMAT" "-n" "${PACKAGE_NAME}" "-v" "$WORKBENCH_VERSION" "-x" "var/www/arvados-workbench/current/log" "-x" "var/www/arvados-workbench/current/vendor/bundle" "-x" "var/www/arvados-workbench/current/vendor/cache/*" "-x" "var/www/arvados-workbench/current/coverage" "-x" "var/www/arvados-workbench/current/Capfile*" "-x" "var/www/arvados-workbench/current/config/deploy*" "--after-install=$RUN_BUILD_PACKAGES_PATH/arvados-workbench-extras/postinst.sh" "$WORKSPACE/apps/workbench/=/var/www/arvados-workbench/current" "$RUN_BUILD_PACKAGES_PATH/arvados-workbench-extras/arvados-workbench-upgrade.sh=/usr/local/bin/arvados-workbench-upgrade.sh")
+
+debug_echo -e "\n${COMMAND_ARR[@]}\n"
+
+FPM_RESULTS=$("${COMMAND_ARR[@]}")
+FPM_EXIT_CODE=$?
+fpm_verify $FPM_EXIT_CODE $FPM_RESULTS
+
+# Workbench package build done
# clean up temporary GOPATH
rm -rf "$GOPATH"