Restrict Python SDK tests to the given class
apps/workbench_test="TEST=test/integration/pipeline_instances_test.rb"
Restrict Workbench tests to the given file
+services/arv-git-httpd_test="-check.vv"
+ Show all log messages, even when tests pass (also works
+ with services/keepstore_test etc.)
ARVADOS_DEBUG=1
Print more debug messages
envvar=value Set \$envvar to value. Primarily useful for WORKSPACE,
doc
services/api
services/crunchstat
+services/dockercleaner
services/fuse
services/keepproxy
services/keepstore
GITDIR=
GOPATH=
VENVDIR=
+VENV3DIR=
PYTHONPATH=
GEMHOME=
declare -A leave_temp
clear_temp() {
leaving=""
- for var in VENVDIR GOPATH GITDIR GEMHOME
+ for var in VENVDIR VENV3DIR GOPATH GITDIR GEMHOME
do
if [[ -z "${leave_temp[$var]}" ]]
then
fatal() {
clear_temp
- echo >&2 "Fatal: $* in ${FUNCNAME[1]} at ${BASH_SOURCE[1]} line ${BASH_LINENO[0]}"
+ echo >&2 "Fatal: $* (encountered in ${FUNCNAME[1]} at ${BASH_SOURCE[1]} line ${BASH_LINENO[0]})"
exit 1
}
exit_cleanly() {
trap - INT
+ create-plot-data-from-log.sh $BUILD_NUMBER "$WORKSPACE/apps/workbench/log/test.log" "$WORKSPACE/apps/workbench/log/"
rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
- stop_api
+ stop_services
rotate_logfile "$WORKSPACE/services/api/log/" "test.log"
report_outcomes
clear_temp
}
sanity_checks() {
- # Make sure WORKSPACE is set
- if ! [[ -n "$WORKSPACE" ]]; then
- echo >&2 "$helpmessage"
- echo >&2
- echo >&2 "Error: WORKSPACE environment variable not set"
- echo >&2
- exit 1
- fi
-
- # Make sure virtualenv is installed
- `virtualenv --help >/dev/null 2>&1`
-
- if [[ "$?" != "0" ]]; then
- echo >&2
- echo >&2 "Error: virtualenv could not be found"
- echo >&2
- exit 1
- fi
-
- # Make sure go is installed
- `go env >/dev/null 2>&1`
-
- if [[ "$?" != "0" ]]; then
- echo >&2
- echo >&2 "Error: go could not be found"
- echo >&2
- exit 1
- fi
-
- # Make sure gcc is installed
- `gcc --help >/dev/null 2>&1`
-
- if [[ "$?" != "0" ]]; then
- echo >&2
- echo >&2 "Error: gcc could not be found"
- echo >&2
- exit 1
- fi
+ ( [[ -n "$WORKSPACE" ]] && [[ -d "$WORKSPACE/services" ]] ) \
+ || fatal "WORKSPACE environment variable not set to a source directory (see: $0 --help)"
+ echo Checking dependencies:
+ echo -n 'virtualenv: '
+ virtualenv --version \
+ || fatal "No virtualenv. Try: apt-get install virtualenv"
+ echo -n 'go: '
+ go version \
+ || fatal "No go binary. See http://golang.org/doc/install"
+ echo -n 'gcc: '
+ gcc --version | egrep ^gcc \
+ || fatal "No gcc. Try: apt-get install build-essential"
+ echo -n 'fuse.h: '
+ find /usr/include -wholename '*fuse/fuse.h' \
+ || fatal "No fuse/fuse.h. Try: apt-get install libfuse-dev"
+ echo -n 'pyconfig.h: '
+ find /usr/include -name pyconfig.h | egrep --max-count=1 . \
+ || fatal "No pyconfig.h. Try: apt-get install python-dev"
+ echo -n 'nginx: '
+ PATH="$PATH:/sbin:/usr/sbin:/usr/local/sbin" nginx -v \
+ || fatal "No nginx. Try: apt-get install nginx"
}
rotate_logfile() {
+ # i.e. rotate_logfile "$WORKSPACE/apps/workbench/log/" "test.log"
# $BUILD_NUMBER is set by Jenkins if this script is being called as part of a Jenkins run
if [[ -f "$1/$2" ]]; then
THEDATE=`date +%Y%m%d%H%M%S`
;;
--leave-temp)
leave_temp[VENVDIR]=1
+ leave_temp[VENV3DIR]=1
leave_temp[GOPATH]=1
leave_temp[GEMHOME]=1
;;
&& (env | egrep ^ARVADOS)
}
-stop_api() {
+start_nginx_proxy_services() {
+ echo 'Starting keepproxy, arv-git-httpd, and nginx ssl proxy...'
+ cd "$WORKSPACE" \
+ && python sdk/python/tests/run_test_server.py start_keep_proxy \
+ && python sdk/python/tests/run_test_server.py start_arv-git-httpd \
+ && python sdk/python/tests/run_test_server.py start_nginx \
+ && export ARVADOS_TEST_PROXY_SERVICES=1
+}
+
+stop_services() {
+ if [[ -n "$ARVADOS_TEST_PROXY_SERVICES" ]]; then
+ unset ARVADOS_TEST_PROXY_SERVICES
+ cd "$WORKSPACE" \
+ && python sdk/python/tests/run_test_server.py stop_nginx \
+ && python sdk/python/tests/run_test_server.py stop_arv-git-httpd \
+ && python sdk/python/tests/run_test_server.py stop_keep_proxy
+ fi
if [[ -n "$ARVADOS_TEST_API_HOST" ]]; then
unset ARVADOS_TEST_API_HOST
cd "$WORKSPACE" \
find -name '*.pyc' -delete
# Set up temporary install dirs (unless existing dirs were supplied)
-for tmpdir in VENVDIR GOPATH GEMHOME
+for tmpdir in VENVDIR VENV3DIR GOPATH GEMHOME
do
if [[ -n "${!tmpdir}" ]]; then
leave_temp[$tmpdir]=1
virtualenv --setuptools "$VENVDIR" || fatal "virtualenv $VENVDIR failed"
. "$VENVDIR/bin/activate"
-# When re-using $VENVDIR, upgrade any packages (except arvados) that are
-# already installed
-pip install --quiet --upgrade `pip freeze | grep -v arvados | cut -f1 -d=`
-
# Note: this must be the last time we change PATH, otherwise rvm will
# whine a lot.
setup_ruby_environment
fi
# Needed for run_test_server.py which is used by certain (non-Python) tests.
-echo "pip install -q PyYAML"
-pip install --quiet PyYAML || fatal "pip install PyYAML failed"
+pip freeze 2>/dev/null | egrep ^PyYAML= \
+ || pip install PyYAML >/dev/null \
+ || fatal "pip install PyYAML failed"
+
+# If Python 3 is available, set up its virtualenv in $VENV3DIR.
+# Otherwise, skip dependent tests.
+PYTHON3=$(which python3)
+if [ "0" = "$?" ]; then
+ virtualenv --python "$PYTHON3" --setuptools "$VENV3DIR" \
+ || fatal "python3 virtualenv $VENV3DIR failed"
+else
+ PYTHON3=
+ skip[services/dockercleaner]=1
+ cat >&2 <<EOF
+
+Warning: python3 could not be found
+services/dockercleaner install and tests will be skipped
+
+EOF
+fi
checkexit() {
if [[ "$1" != "0" ]]; then
timer_reset
if [[ "$2" == "go" ]]
then
- go test ${testargs[$1]} "git.curoverse.com/arvados.git/$1"
+ if [[ -n "${testargs[$1]}" ]]
+ then
+ # "go test -check.vv giturl" doesn't work, but this
+ # does:
+ cd "$WORKSPACE/$1" && go test ${testargs[$1]}
+ else
+ # The above form gets verbose even when testargs is
+ # empty, so use this form in such cases:
+ go test "git.curoverse.com/arvados.git/$1"
+ fi
elif [[ "$2" == "pip" ]]
then
- cd "$WORKSPACE/$1" \
- && python setup.py test ${testargs[$1]}
+ # $3 can name a path directory for us to use, including trailing
+ # slash; e.g., the bin/ subdirectory of a virtualenv.
+ cd "$WORKSPACE/$1" \
+ && "${3}python" setup.py test ${testargs[$1]}
elif [[ "$2" != "" ]]
then
"test_$2"
go get -t "git.curoverse.com/arvados.git/$1"
elif [[ "$2" == "pip" ]]
then
+ # $3 can name a path directory for us to use, including trailing
+ # slash; e.g., the bin/ subdirectory of a virtualenv.
+
# Need to change to a different directory after creating
# the source dist package to avoid a pip bug.
# see https://arvados.org/issues/5766 for details.
# install" ensures that we've actually install the local package
# we just built.
cd "$WORKSPACE/$1" \
- && python setup.py sdist rotate --keep=1 --match .tar.gz \
+ && "${3}python" setup.py sdist rotate --keep=1 --match .tar.gz \
&& cd "$WORKSPACE" \
- && pip install --quiet "$WORKSPACE/$1/dist"/*.tar.gz \
- && pip install --quiet --no-deps --ignore-installed "$WORKSPACE/$1/dist"/*.tar.gz
+ && "${3}pip" install --quiet "$WORKSPACE/$1/dist"/*.tar.gz \
+ && "${3}pip" install --quiet --no-deps --ignore-installed "$WORKSPACE/$1/dist"/*.tar.gz
elif [[ "$2" != "" ]]
then
"install_$2"
do
do_install "$p" pip
done
+if [ -n "$PYTHON3" ]; then
+ do_install services/dockercleaner pip "$VENV3DIR/bin/"
+fi
install_apiserver() {
cd "$WORKSPACE/services/api" \
&& git add tmp \
&& git commit -m 'initial commit'
- # Clear out any lingering postgresql connections to arvados_test, so that we can drop it
- # This assumes the current user is a postgresql superuser
- psql arvados_test -c "SELECT pg_terminate_backend (pg_stat_activity.procpid::int) FROM pg_stat_activity WHERE pg_stat_activity.datname = 'arvados_test';" 2>/dev/null
+ # Clear out any lingering postgresql connections to the test
+ # database, so that we can drop it. This assumes the current user
+ # is a postgresql superuser.
+ cd "$WORKSPACE/services/api" \
+ && test_database=$(python -c "import yaml; print yaml.load(file('config/database.yml'))['test']['database']") \
+ && psql "$test_database" -c "SELECT pg_terminate_backend (pg_stat_activity.procpid::int) FROM pg_stat_activity WHERE pg_stat_activity.datname = '$test_database';" 2>/dev/null
cd "$WORKSPACE/services/api" \
&& RAILS_ENV=test bundle exec rake db:drop \
ARVADOS_API_HOST=qr1hi.arvadosapi.com
# Make sure python-epydoc is installed or the next line won't
# do much good!
- PYTHONPATH=$WORKSPACE/sdk/python/ bundle exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
+ PYTHONPATH=$WORKSPACE/sdk/python/ bundle exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
)
}
do_test doc doclinkchecker
-stop_api
+stop_services
test_apiserver() {
cd "$WORKSPACE/services/api" \
do
do_test "$p" pip
done
+do_test services/dockercleaner pip "$VENV3DIR/bin/"
for g in "${gostuff[@]}"
do
done
test_workbench() {
- cd "$WORKSPACE/apps/workbench" \
+ start_nginx_proxy_services \
+ && cd "$WORKSPACE/apps/workbench" \
&& RAILS_ENV=test bundle exec rake test TESTOPTS=-v ${testargs[apps/workbench]}
}
do_test apps/workbench workbench
test_workbench_benchmark() {
- cd "$WORKSPACE/apps/workbench" \
+ start_nginx_proxy_services \
+ && cd "$WORKSPACE/apps/workbench" \
&& RAILS_ENV=test bundle exec rake test:benchmark ${testargs[apps/workbench_benchmark]}
}
do_test apps/workbench_benchmark workbench_benchmark
test_workbench_profile() {
- cd "$WORKSPACE/apps/workbench" \
+ start_nginx_proxy_services \
+ && cd "$WORKSPACE/apps/workbench" \
&& RAILS_ENV=test bundle exec rake test:profile ${testargs[apps/workbench_profile]}
}
do_test apps/workbench_profile workbench_profile