#!/bin/bash
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: AGPL-3.0
+
DEBUG=0
SSH_PORT=22
+PUPPET_CONCURRENCY=5
read -d] -r SCOPES <<EOF
--scopes
echo >&2 " <identifier> Arvados cluster name"
echo >&2
echo >&2 "$0 options:"
+ echo >&2 " -n, --node <node> Single machine to deploy, use fqdn, optional"
echo >&2 " -p, --port <ssh port> SSH port to use (default 22)"
+ echo >&2 " -c, --concurrency <max> Maximum concurrency for puppet runs (default 5)"
echo >&2 " -d, --debug Enable debug output"
echo >&2 " -h, --help Display this help and exit"
echo >&2
# NOTE: This requires GNU getopt (part of the util-linux package on Debian-based distros).
-TEMP=`getopt -o hdp: \
- --long help,debug,port: \
+TEMP=`getopt -o hdp:c:n: \
+ --long help,debug,port:,concurrency:,node: \
-n "$0" -- "$@"`
if [ $? != 0 ] ; then echo "Use -h for help"; exit 1 ; fi
while [ $# -ge 1 ]
do
case $1 in
+ -n | --node)
+ NODE="$2"; shift 2
+ ;;
-p | --port)
SSH_PORT="$2"; shift 2
;;
+ -c | --concurrency)
+ PUPPET_CONCURRENCY="$2"; shift 2
+ ;;
-d | --debug)
DEBUG=1
shift
eval "$return_var=$ECODE"
}
-title "Updating API server"
-SUM_ECODE=0
-run_puppet $IDENTIFIER.arvadosapi.com ECODE
-SUM_ECODE=$(($SUM_ECODE + $ECODE))
-if [ ! "$IDENTIFIER" = "c97qk" ]
-then
- run_command $IDENTIFIER.arvadosapi.com ECODE "dpkg -L arvados-mailchimp-plugin 2>/dev/null && apt-get install arvados-mailchimp-plugin --reinstall || echo"
+if [[ "$NODE" == "" ]] || [[ "$NODE" == "$IDENTIFIER.arvadosapi.com" ]]; then
+ title "Updating API server"
+ SUM_ECODE=0
+ run_puppet $IDENTIFIER.arvadosapi.com ECODE
SUM_ECODE=$(($SUM_ECODE + $ECODE))
+
+ if [[ "$SUM_ECODE" != "0" ]]; then
+ title "ERROR: Updating API server FAILED"
+ EXITCODE=$(($EXITCODE + $SUM_ECODE))
+ exit $EXITCODE
+ fi
fi
-if [[ "$SUM_ECODE" != "0" ]]; then
- title "ERROR: Updating API server FAILED"
- EXITCODE=$(($EXITCODE + $SUM_ECODE))
- exit $EXITCODE
+if [[ "$NODE" == "$IDENTIFIER.arvadosapi.com" ]]; then
+ # we are done
+ exit 0
fi
title "Loading ARVADOS_API_HOST and ARVADOS_API_TOKEN"
fi
title "Gathering list of shell and Keep nodes"
-SHELL_NODES=`ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv virtual_machine list |jq .items[].hostname -r`
-KEEP_NODES=`ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv keep_service list |jq .items[].service_host -r`
+SHELL_NODES=`ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN rvm-exec default arv virtual_machine list |jq .items[].hostname -r`
+KEEP_NODES=`ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN rvm-exec default arv keep_service list |jq .items[].service_host -r`
nodes=""
for n in workbench manage switchyard $SHELL_NODES $KEEP_NODES; do
# e.g. shell
node=$n.$ARVADOS_API_HOST
fi
- # e.g. keep.qr1hi
- nodes="$nodes ${node%.arvadosapi.com}"
+ if [[ "$NODE" == "" ]] || [[ "$NODE" == "$node" ]]; then
+ # e.g. keep.qr1hi
+ nodes="$nodes ${node%.arvadosapi.com}"
+ fi
done
-## at this point nodes should be an array containing
-## manage.qr1hi, keep.qr1hi, etc
-## that should be defined in the .ssh/config file
-title "Updating in parallel: $nodes"
-export -f run_puppet
-export -f title
-export SSH_PORT
-export PUPPET_AGENT
-echo $nodes|xargs -d " " -n 1 -P 10 -I {} bash -c "run_puppet {}"
+if [[ "$nodes" != "" ]]; then
+ ## at this point nodes should be an array containing
+ ## manage.qr1hi, keep.qr1hi, etc
+ ## that should be defined in the .ssh/config file
+ title "Updating in parallel: $nodes"
+ export -f run_puppet
+ export -f title
+ export SSH_PORT
+ export PUPPET_AGENT
+ echo $nodes|xargs -d " " -n 1 -P $PUPPET_CONCURRENCY -I {} bash -c "run_puppet {}"
+fi
-title "Locating Arvados Standard Docker images project"
+if [[ "$NODE" == "" ]]; then
+ title "Locating Arvados Standard Docker images project"
-JSON_FILTER="[[\"name\", \"=\", \"Arvados Standard Docker Images\"], [\"owner_uuid\", \"=\", \"$IDENTIFIER-tpzed-000000000000000\"]]"
-DOCKER_IMAGES_PROJECT=`ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv --format=uuid group list --filters="$JSON_FILTER"`
+ JSON_FILTER="[[\"name\", \"=\", \"Arvados Standard Docker Images\"], [\"owner_uuid\", \"=\", \"$IDENTIFIER-tpzed-000000000000000\"]]"
+ DOCKER_IMAGES_PROJECT=`ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv --format=uuid group list --filters="$JSON_FILTER"`
-if [[ "$DOCKER_IMAGES_PROJECT" == "" ]]; then
- title "Warning: Arvados Standard Docker Images project not found. Creating it."
+ if [[ "$DOCKER_IMAGES_PROJECT" == "" ]]; then
+ title "Warning: Arvados Standard Docker Images project not found. Creating it."
- DOCKER_IMAGES_PROJECT=`ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv --format=uuid group create --group "{\"owner_uuid\":\"$IDENTIFIER-tpzed-000000000000000\", \"name\":\"Arvados Standard Docker Images\", \"group_class\":\"project\"}"`
- ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv link create --link "{\"tail_uuid\":\"$IDENTIFIER-j7d0g-fffffffffffffff\", \"head_uuid\":\"$DOCKER_IMAGES_PROJECT\", \"link_class\":\"permission\", \"name\":\"can_read\" }"
- if [[ "$?" != "0" ]]; then
- title "ERROR: could not create standard Docker images project Please create it, cf. http://doc.arvados.org/install/create-standard-objects.html"
- exit 1
+ DOCKER_IMAGES_PROJECT=`ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv --format=uuid group create --group "{\"owner_uuid\":\"$IDENTIFIER-tpzed-000000000000000\", \"name\":\"Arvados Standard Docker Images\", \"group_class\":\"project\"}"`
+ ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv link create --link "{\"tail_uuid\":\"$IDENTIFIER-j7d0g-fffffffffffffff\", \"head_uuid\":\"$DOCKER_IMAGES_PROJECT\", \"link_class\":\"permission\", \"name\":\"can_read\" }"
+ if [[ "$?" != "0" ]]; then
+ title "ERROR: could not create standard Docker images project Please create it, cf. http://doc.arvados.org/install/create-standard-objects.html"
+ exit 1
+ fi
fi
-fi
-title "Found Arvados Standard Docker Images project with uuid $DOCKER_IMAGES_PROJECT"
-GIT_COMMIT=`ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER "python -c 'import arvados_cwl ; print arvados_cwl.__version__'"`
+ title "Found Arvados Standard Docker Images project with uuid $DOCKER_IMAGES_PROJECT"
+ GIT_COMMIT=`ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER "python -c 'import arvados_cwl ; print arvados_cwl.__version__'" 2>&1 |grep -v INFO:rdflib:RDFLib`
-if [[ "$?" != "0" ]] || [[ "$GIT_COMMIT" == "" ]]; then
- title "ERROR: unable to get arvados/jobs Docker image git revision"
- exit 1
-else
- title "Found git commit for arvados/jobs Docker image: $GIT_COMMIT"
-fi
+ if [[ "$?" != "0" ]] || [[ "$GIT_COMMIT" == "" ]]; then
+ title "ERROR: unable to get arvados/jobs Docker image git revision"
+ exit 1
+ else
+ title "Found git commit for arvados/jobs Docker image: $GIT_COMMIT"
+ fi
-run_command shell.$IDENTIFIER ECODE "ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN /usr/local/rvm/bin/rvm-exec default arv keep docker" |grep -q $GIT_COMMIT
+ run_command shell.$IDENTIFIER ECODE "ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN /usr/local/rvm/bin/rvm-exec default arv keep docker" |grep -q $GIT_COMMIT
-if [[ "$?" == "0" ]]; then
- title "Found latest arvados/jobs Docker image, nothing to upload"
- # Just in case it isn't yet, tag the image as latest
- ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER "ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv-keepdocker arvados/jobs latest"
-else
- title "Installing latest arvados/jobs Docker image"
- ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER "ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN /usr/local/rvm/bin/rvm-exec default arv keep docker --pull --project-uuid=$DOCKER_IMAGES_PROJECT arvados/jobs $GIT_COMMIT"
- ## adding latest tag too refs 9254
- ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER docker tag -f arvados/jobs:$GIT_COMMIT arvados/jobs:latest
- ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER "ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv-keepdocker --project-uuid=$DOCKER_IMAGES_PROJECT arvados/jobs latest"
- if [[ "$?" -ne 0 ]]; then
- title "'git pull' failed exiting..."
- exit 1
+ if [[ "$?" == "0" ]]; then
+ title "Found latest arvados/jobs Docker image, nothing to upload"
+ # Just in case it isn't yet, tag the image as latest
+ ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER "ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv-keepdocker arvados/jobs latest"
+ else
+ title "Installing latest arvados/jobs Docker image"
+ ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER "ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN /usr/local/rvm/bin/rvm-exec default arv keep docker --pull --project-uuid=$DOCKER_IMAGES_PROJECT arvados/jobs $GIT_COMMIT"
+ ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER docker tag --force >/dev/null 2>&1
+ # docker 1.13 no longer supports --force. Sigh.
+ if [[ "$?" == "125" ]]; then
+ FORCE_TAG=""
+ else
+ FORCE_TAG="--force"
+ fi
+ ## adding latest tag too refs 9254
+ ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER docker tag $FORCE_TAG arvados/jobs:$GIT_COMMIT arvados/jobs:latest
+ ssh -o "StrictHostKeyChecking no" shell.$IDENTIFIER "ARVADOS_API_HOST=$ARVADOS_API_HOST ARVADOS_API_TOKEN=$ARVADOS_API_TOKEN arv-keepdocker --project-uuid=$DOCKER_IMAGES_PROJECT arvados/jobs latest"
+ if [[ "$?" -ne 0 ]]; then
+ title "'git pull' failed exiting..."
+ exit 1
+ fi
fi
fi
projects / arvados-dev.git / blobdiff