Migrating to carpentries WIP
authorPeter Amstutz <peter.amstutz@curii.com>
Tue, 26 Jan 2021 21:36:18 +0000 (16:36 -0500)
committerPeter Amstutz <peter.amstutz@curii.com>
Tue, 26 Jan 2021 21:36:18 +0000 (16:36 -0500)
commit700f5bb55fa1ff957196b1e0f1400ab0b0d07cf8
tree4b28c1b4d0abef25d0b3c144f2b8eb8eba9b6019
parenta71124218b1c1dd39c6709ebdc0041980bc73346
Migrating to carpentries WIP

Arvados-DCO-1.1-Signed-off-by: Peter Amstutz <peter.amstutz@curii.com>
44 files changed:
AUTHORS [new file with mode: 0644]
CITATION [new file with mode: 0644]
CONTRIBUTING.md [new file with mode: 0644]
Gemfile
README.md
README.md.old [new file with mode: 0644]
_config.yml [new file with mode: 0644]
_episodes/01-introduction.md [new file with mode: 0644]
_episodes/02-workflow.md [moved from lesson1/lesson1.md with 58% similarity]
_episodes/03-running.md [moved from lesson2/lesson2.md with 95% similarity]
_episodes/04-commandlinetool.md [moved from lesson3/lesson3.md with 95% similarity]
_episodes/05-scatter.md [moved from lesson4/lesson4.md with 95% similarity]
_episodes/06-expressions.md [moved from lesson5/lesson5.md with 95% similarity]
_episodes/07-resources.md [moved from lesson6/lesson6.md with 82% similarity]
_extras/about.md [new file with mode: 0644]
_extras/discuss.md [new file with mode: 0644]
_extras/figures.md [new file with mode: 0644]
_extras/guide.md [new file with mode: 0644]
answers/ep2/bio-cwl-tools [new symlink]
answers/ep2/main.cwl [moved from lesson1/answers/main.cwl with 100% similarity]
answers/ep4/bio-cwl-tools [new symlink]
answers/ep4/featureCounts.cwl [moved from lesson3/answers/featureCounts.cwl with 100% similarity]
answers/ep4/main.cwl [moved from lesson3/answers/main.cwl with 100% similarity]
answers/ep5/part1/alignment.cwl [moved from lesson4/answers/part1/alignment.cwl with 100% similarity]
answers/ep5/part1/bio-cwl-tools [new symlink]
answers/ep5/part1/featureCounts.cwl [moved from lesson4/answers/part1/featureCounts.cwl with 100% similarity]
answers/ep5/part1/main.cwl [moved from lesson4/answers/part1/main.cwl with 100% similarity]
answers/ep5/part2/alignment.cwl [moved from lesson4/answers/part2/alignment.cwl with 100% similarity]
answers/ep5/part2/bio-cwl-tools [new symlink]
answers/ep5/part2/featureCounts.cwl [moved from lesson4/answers/part2/featureCounts.cwl with 100% similarity]
answers/ep5/part2/main.cwl [moved from lesson4/answers/part2/main.cwl with 100% similarity]
answers/ep5/part4/alignment.cwl [moved from lesson4/answers/part4/alignment.cwl with 100% similarity]
answers/ep5/part4/bio-cwl-tools [new symlink]
answers/ep5/part4/featureCounts.cwl [moved from lesson4/answers/part4/featureCounts.cwl with 100% similarity]
answers/ep5/part4/main.cwl [moved from lesson4/answers/part4/main.cwl with 100% similarity]
answers/ep6/alignment.cwl [moved from lesson5/answers/alignment.cwl with 100% similarity]
answers/ep6/bio-cwl-tools [new symlink]
answers/ep6/featureCounts.cwl [moved from lesson5/answers/featureCounts.cwl with 100% similarity]
answers/ep6/main.cwl [moved from lesson5/answers/main.cwl with 100% similarity]
answers/ep6/subdirs.cwl [moved from lesson5/answers/subdirs.cwl with 100% similarity]
assets/img/RNAseqWorkflow.png [moved from lesson1/RNAseqWorkflow.png with 100% similarity]
index.md [new file with mode: 0644]
reference.md [new file with mode: 0644]
setup.md [new file with mode: 0644]