X-Git-Url: https://git.arvados.org/rnaseq-cwl-training.git/blobdiff_plain/e8b4a1c542e08a44427199a72d6dcc0f30bbd7b6..3b848851a2d3ffad50c85b08f36f3b2f4666d8d5:/_includes/links.md

diff --git a/_includes/links.md b/_includes/links.md
index 1b28341..4a85ed4 100644
--- a/_includes/links.md
+++ b/_includes/links.md
@@ -1,11 +1,12 @@
+{% include base_path.html %}
 [cc-by-human]: https://creativecommons.org/licenses/by/4.0/
 [cc-by-legal]: https://creativecommons.org/licenses/by/4.0/legalcode
 [ci]: http://communityin.org/
-[coc-reporting]: https://docs.carpentries.org/topic_folders/policies/code-of-conduct.html#reporting-guidelines
+[coc-reporting]: https://docs.carpentries.org/topic_folders/policies/incident-reporting.html
 [coc]: https://docs.carpentries.org/topic_folders/policies/code-of-conduct.html
 [concept-maps]: https://carpentries.github.io/instructor-training/05-memory/
 [contrib-covenant]: https://contributor-covenant.org/
-[contributing]: {{ site.github.repository_url }}/blob/gh-pages/CONTRIBUTING.md
+[contributing]: {{ repo_url }}/blob/{{ source_branch }}/CONTRIBUTING.md
 [cran-checkpoint]: https://cran.r-project.org/package=checkpoint
 [cran-knitr]: https://cran.r-project.org/package=knitr
 [cran-stringr]: https://cran.r-project.org/package=stringr
@@ -18,8 +19,15 @@
 [jekyll-windows]: http://jekyll-windows.juthilo.com/
 [jekyll]: https://jekyllrb.com/
 [jupyter]: https://jupyter.org/
+[kramdown]: https://kramdown.gettalong.org/
+[lc-lessons]: https://librarycarpentry.org/lessons/
+[lesson-aio]: {{ relative_root_path }}{% link aio.md %}
+[lesson-coc]: {{ relative_root_path }}{% link CODE_OF_CONDUCT.md %}
 [lesson-example]: https://carpentries.github.io/lesson-example/
-[lc-lessons]: https://librarycarpentry.org/#portfolio
+[lesson-license]: {{ relative_root_path }}{% link LICENSE.md %}
+[lesson-mainpage]: {{ relative_root_path }}{% link index.md %}
+[lesson-reference]: {{ relative_root_path }}{% link reference.md %}
+[lesson-setup]: {{ relative_root_path }}{% link setup.md %}
 [mit-license]: https://opensource.org/licenses/mit-license.html
 [morea]: https://morea-framework.github.io/
 [numfocus]: https://numfocus.org/
@@ -34,7 +42,8 @@
 [ruby-installer]: https://rubyinstaller.org/
 [rubygems]: https://rubygems.org/pages/download/
 [styles]: https://github.com/carpentries/styles/
+[swc-lessons]: https://software-carpentry.org/lessons/
 [swc-releases]: https://github.com/swcarpentry/swc-releases
-[swc-lessons]: https://software-carpentry.org/lessons/ 
+[training]: https://carpentries.github.io/instructor-training/
 [workshop-repo]: {{ site.workshop_repo }}
 [yaml]: http://yaml.org/