X-Git-Url: https://git.arvados.org/rnaseq-cwl-training.git/blobdiff_plain/cc0502fd089480c65fb1e3b202bbe8c276a6c8ab..17e18678b6fbcc09220f597e55e7574dc9cae60a:/README.md diff --git a/README.md b/README.md index 48ad847..060994a 100644 --- a/README.md +++ b/README.md @@ -1,27 +1,40 @@ -# Lessons +# FIXME Lesson title -These lessons go walk through the development of a CWL workflow for -rnaseq. +[![Create a Slack Account with us](https://img.shields.io/badge/Create_Slack_Account-The_Carpentries-071159.svg)](https://swc-slack-invite.herokuapp.com/) -| Lesson | Description | -|----------|-------------| -| [Lesson 1](lesson1/lesson1.md) | Turning a shell script into a workflow from existing tool wrappers | -| [Lesson 2](lesson2/lesson2.md) | Running and debugging a workflow | -| [Lesson 3](lesson3/lesson3.md) | Writing a tool wrapper | -| [Lesson 4](lesson4/lesson4.md) | Analyzing multiple samples | -| [Lesson 5](lesson5/lesson5.md) | Dynamic Workflow behavior with expressions | -| [Lesson 6](lesson6/lesson6.md) | Resources for further learning | +This repository generates the corresponding lesson website from [The Carpentries](https://carpentries.org/) repertoire of lessons. -# Acknowledgements +## Contributing -These CWL lessons are based on "Introduction to RNA-seq using -high-performance computing (HPC)" lessons developed by members of the -teaching team at the Harvard Chan Bioinformatics Core (HBC) and -obtained from +We welcome all contributions to improve the lesson! Maintainers will do their best to help you if you have any +questions, concerns, or experience any difficulties along the way. -https://github.com/hbctraining/Intro-to-rnaseq-hpc-O2 +We'd like to ask you to familiarize yourself with our [Contribution Guide](CONTRIBUTING.md) and have a look at +the [more detailed guidelines][lesson-example] on proper formatting, ways to render the lesson locally, and even +how to write new episodes. -The original lessons are open access materials distributed under the -terms of the Creative Commons Attribution license (CC BY 4.0), which -permits unrestricted use, distribution, and reproduction in any -medium, provided the original author and source are credited. +Please see the current list of [issues][FIXME] for ideas for contributing to this +repository. For making your contribution, we use the GitHub flow, which is +nicely explained in the chapter [Contributing to a Project](http://git-scm.com/book/en/v2/GitHub-Contributing-to-a-Project) in Pro Git +by Scott Chacon. +Look for the tag ![good_first_issue](https://img.shields.io/badge/-good%20first%20issue-gold.svg). This indicates that the maintainers will welcome a pull request fixing this issue. + + +## Maintainer(s) + +Current maintainers of this lesson are + +* FIXME +* FIXME +* FIXME + + +## Authors + +A list of contributors to the lesson can be found in [AUTHORS](AUTHORS) + +## Citation + +To cite this lesson, please consult with [CITATION](CITATION) + +[lesson-example]: https://carpentries.github.io/lesson-example