Fix typos

[rnaseq-cwl-training.git] / lesson3 / lesson3.md

diff --git a/lesson3/lesson3.md b/lesson3/lesson3.md
index 9bd5a7089e3ddf8da69865447067a9cfa3917540..f24bce49c82d3f8bf9dc9dc8e1e11943489b6b29 100644 (file)
--- a/lesson3/lesson3.md
+++ b/lesson3/lesson3.md
@@ -89,7 +89,7 @@ output directory called `featurecounts.tsv`
 outputs:
   featurecounts:
     type: File
-      outputBinding:
+    outputBinding:
       glob: featurecounts.tsv
 ```
 
@@ -162,10 +162,10 @@ steps:
       ResourceRequirement:
         ramMin: 500
     run: featureCounts.cwl
-      in:
-        counts_input_bam: samtools/bam_sorted_indexed
-        gtf: gtf
-      out: [featurecounts]
+    in:
+      counts_input_bam: samtools/bam_sorted_indexed
+      gtf: gtf
+    out: [featurecounts]
 ```
 
 We will add the result from featurecounts to the output:
@@ -175,7 +175,7 @@ outputs:
   ...
   featurecounts:
     type: File
-      outputSource: featureCounts/featurecounts
+    outputSource: featureCounts/featurecounts
 ```
 
 You should now be able to re-run the workflow and it will run the