Add several FIXMEs to the template episode

[rnaseq-cwl-training.git] / Makefile

diff --git a/Makefile b/Makefile
index 415fd72bd8daf786368c3c51df036b8cda39f843..74f655d6f8c79d9d3f847d2efb229a17d51a3a06 100644 (file)
--- a/Makefile
+++ b/Makefile
@@ -63,7 +63,7 @@ RMD_DST = $(patsubst _episodes_rmd/%.Rmd,_episodes/%.md,$(RMD_SRC))
 # Lesson source files in the order they appear in the navigation menu.
 MARKDOWN_SRC = \
   index.md \
-  CONDUCT.md \
+  CODE_OF_CONDUCT.md \
   setup.md \
   $(sort $(wildcard _episodes/*.md)) \
   reference.md \
@@ -88,12 +88,12 @@ ${RMD_DST} : ${RMD_SRC}
        @bin/knit_lessons.sh ${RMD_SRC}
 
 ## lesson-check     : validate lesson Markdown.
-lesson-check :
+lesson-check : lesson-fixme
        @bin/lesson_check.py -s . -p ${PARSER} -r _includes/links.md
 
 ## lesson-check-all : validate lesson Markdown, checking line lengths and trailing whitespace.
 lesson-check-all :
-       @bin/lesson_check.py -s . -p ${PARSER} -l -w --permissive
+       @bin/lesson_check.py -s . -p ${PARSER} -r _includes/links.md -l -w --permissive
 
 ## unittest         : run unit tests on checking tools.
 unittest :